Cow genome map

Conread name: Ss1.1-rsag040_h9.5

Conread position: 13-298
Cow position: chr3:20382382-20382671 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 13-298
Cow position: chr3:53516954-53517245 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 19-293
Cow position: chr3:65208536-65208806 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 217

Conread position: 20-293
Cow position: chr3:53412484-53412760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 25

Conread position: 29-293
Cow position: chr3:48229153-48228885 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 211

Conread position: 30-291
Cow position: chr3:45975874-45976128 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 157, 21

Conread position: 31-270
Cow position: chr3:84197182-84197423 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 44

Conread position: 31-274
Cow position: chr3:67164644-67164890 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 31-298
Cow position: chr3:6687154-6687423 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 31-298
Cow position: chr3:34029558-34029284 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 31-298
Cow position: chr3:46859926-46859658 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 17

Conread position: 32-176
Cow position: chr3:48843620-48843769 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 32-201
Cow position: chr3:30330756-30330583 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 32-231
Cow position: chr3:72671176-72670972 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 32-239
Cow position: chr3:51938735-51938527 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 38

Conread position: 32-249
Cow position: chr3:27919791-27920014 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-261
Cow position: chr3:47080046-47079811 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-274
Cow position: chr3:29579993-29580221 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 174, 48

Conread position: 32-276
Cow position: chr3:52653297-52653048 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 32-280
Cow position: chr3:2906406-2906139 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 32-284
Cow position: chr3:18860781-18861039 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-289
Cow position: chr3:23288970-23288706 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 139

Conread position: 32-289
Cow position: chr3:66621560-66621823 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 32-289
Cow position: chr3:66889603-66889343 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 27

Conread position: 32-290
Cow position: chr3:2870152-2870416 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-290
Cow position: chr3:77424966-77425219 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 181

Conread position: 32-290
Cow position: chr3:77444773-77445032 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 13

Conread position: 32-291
Cow position: chr3:1742695-1742960 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr3:2918833-2919093 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 32-291
Cow position: chr3:3840153-3839889 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 208

Conread position: 32-291
Cow position: chr3:4287453-4287715 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 32-291
Cow position: chr3:6783731-6783997 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 32-291
Cow position: chr3:29329926-29329661 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr3:34505980-34505724 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 32-291
Cow position: chr3:40824756-40825021 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 32-291
Cow position: chr3:42448480-42448744 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 32-291
Cow position: chr3:51364422-51364160 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 32-291
Cow position: chr3:56146667-56146933 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr3:56295550-56295814 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 32-291
Cow position: chr3:56327472-56327736 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 32-291
Cow position: chr3:68891206-68890942 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 32-291
Cow position: chr3:78026049-78025792 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 81, 16

Conread position: 32-292
Cow position: chr3:32621678-32621412 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 32-292
Cow position: chr3:38494605-38494869 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 88

Conread position: 32-292
Cow position: chr3:63240881-63240614 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-293
Cow position: chr3:19720294-19720028 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 97

Conread position: 32-294
Cow position: chr3:2854082-2853819 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 153

Conread position: 32-298
Cow position: chr3:595500-595762 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 99, 19

Conread position: 32-298
Cow position: chr3:2367973-2367703 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 32-298
Cow position: chr3:2709503-2709234 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 32-298
Cow position: chr3:5993716-5993452 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 6

Conread position: 32-298
Cow position: chr3:6876814-6876552 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 32-298
Cow position: chr3:7157356-7157083 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:7478551-7478279 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:16224249-16224521 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 32-298
Cow position: chr3:18812862-18813136 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:19799808-19799543 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 32-298
Cow position: chr3:19945608-19945885 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:27864541-27864808 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 237

Conread position: 32-298
Cow position: chr3:29575760-29575488 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 32-298
Cow position: chr3:30315912-30316183 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 63

Conread position: 32-298
Cow position: chr3:30617556-30617288 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 135

Conread position: 32-298
Cow position: chr3:31416380-31416652 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 32-298
Cow position: chr3:37970410-37970682 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:40338784-40338512 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:41209238-41208967 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 213

Conread position: 32-298
Cow position: chr3:44925426-44925698 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:45034103-45034375 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:47087660-47087913 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 27

Conread position: 32-298
Cow position: chr3:48057997-48057725 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:49136201-49135929 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 32-298
Cow position: chr3:64026771-64026502 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 144

Conread position: 32-298
Cow position: chr3:68698609-68698339 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 216

Conread position: 32-298
Cow position: chr3:68872391-68872119 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:69932470-69932198 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr3:72631427-72631692 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 19

Conread position: 32-298
Cow position: chr3:74058890-74059161 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 202

Conread position: 33-293
Cow position: chr3:36877287-36877029 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 172, 47

Conread position: 33-298
Cow position: chr3:36863093-36862822 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 34-298
Cow position: chr3:19755596-19755328 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 143

Conread position: 34-298
Cow position: chr3:34090117-34089845 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 89, 41

Conread position: 34-298
Cow position: chr3:58948900-58949164 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 46

Conread position: 35-239
Cow position: chr3:63002195-63001985 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 35-267
Cow position: chr3:5884895-5885133 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 35-291
Cow position: chr3:7247901-7248161 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 188

Conread position: 35-291
Cow position: chr3:50916710-50916966 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 171

Conread position: 35-292
Cow position: chr3:32200384-32200646 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 68

Conread position: 35-298
Cow position: chr3:57483359-57483090 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 38-289
Cow position: chr3:23206504-23206248 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 236

Conread position: 39-291
Cow position: chr3:46687849-46687596 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 146

Conread position: 39-316
Cow position: chr3:33634622-33634902 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 110

Conread position: 45-278
Cow position: chr3:24192919-24192680 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 30

Conread position: 45-291
Cow position: chr3:68705843-68706088 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 192

Conread position: 45-298
Cow position: chr3:15054330-15054069 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 35

Conread position: 45-298
Cow position: chr3:18462463-18462210 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 25

Conread position: 45-298
Cow position: chr3:21181321-21181062 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 47-293
Cow position: chr3:67769197-67769438 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 16

Conread position: 47-298
Cow position: chr3:24354527-24354782 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 214

Conread position: 47-298
Cow position: chr3:24644597-24644849 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 11

Conread position: 52-274
Cow position: chr3:56100305-56100078 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 52-279
Cow position: chr3:63218539-63218768 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 16

Conread position: 53-289
Cow position: chr3:68878956-68879191 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 184

Conread position: 53-291
Cow position: chr3:46503935-46504178 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 13

Conread position: 53-292
Cow position: chr3:54291196-54290952 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 27, 13

Conread position: 53-298
Cow position: chr3:3524396-3524647 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 53-298
Cow position: chr3:5952802-5952551 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 147

Conread position: 53-298
Cow position: chr3:43191907-43191656 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 53-298
Cow position: chr3:55892773-55893024 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 55-290
Cow position: chr3:49543823-49543584 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 7

Conread position: 55-295
Cow position: chr3:18354635-18354400 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 83

Conread position: 56-291
Cow position: chr3:64651998-64652237 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 63

Conread position: 56-298
Cow position: chr3:24444712-24444465 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 59-293
Cow position: chr3:4736526-4736294 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 112, 15

Conread position: 59-298
Cow position: chr3:19880036-19880280 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 63-298
Cow position: chr3:16076740-16076979 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 17

Conread position: 70-291
Cow position: chr3:51857283-51857062 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 70-298
Cow position: chr3:74851742-74851513 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 13

Conread position: 71-274
Cow position: chr3:70888661-70888870 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 86-291
Cow position: chr3:56338851-56338642 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 97-290
Cow position: chr3:58167108-58167303 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 99-290
Cow position: chr3:64356530-64356338 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 105-298
Cow position: chr3:19940371-19940565 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 114

Conread position: 109-298
Cow position: chr3:15188254-15188445 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 110-286
Cow position: chr3:25687693-25687870 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 54

Conread position: 121-291
Cow position: chr3:58784697-58784527 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 12

Conread position: 123-292
Cow position: chr3:21028158-21027989 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 146

Conread position: 133-291
Cow position: chr3:59863032-59863191 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 133-298
Cow position: chr3:4029202-4029368 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 133-298
Cow position: chr3:58127263-58127423 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 11

Conread position: 134-298
Cow position: chr3:10242124-10242289 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 61

Conread position: 137-298
Cow position: chr3:38868061-38868227 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 139-273
Cow position: chr3:77578660-77578529 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 47

Conread position: 171-291
Cow position: chr3:38095464-38095585 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.