Cow genome map

Conread name: Ss1.1-rsag040_h9.5

Conread position: 13-173
Cow position: chr5:46665269-46665434 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 19-280
Cow position: chr5:14784110-14783846 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 25

Conread position: 24-289
Cow position: chr5:41554101-41553847 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 139

Conread position: 26-298
Cow position: chr5:3787199-3787479 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 28-293
Cow position: chr5:75624960-75625232 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 175

Conread position: 29-257
Cow position: chr5:61080944-61080708 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 162

Conread position: 30-298
Cow position: chr5:18885262-18884989 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 38

Conread position: 30-298
Cow position: chr5:27003507-27003774 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 121

Conread position: 31-291
Cow position: chr5:6153629-6153362 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 31-291
Cow position: chr5:26184130-26184392 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 242

Conread position: 31-291
Cow position: chr5:51744551-51744810 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 31-298
Cow position: chr5:10920109-10920377 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 31-298
Cow position: chr5:57481270-57480997 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 31-298
Cow position: chr5:64780745-64780472 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 32-173
Cow position: chr5:23236186-23236331 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 19

Conread position: 32-201
Cow position: chr5:27908001-27907827 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 32-251
Cow position: chr5:28014306-28014524 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 182

Conread position: 32-257
Cow position: chr5:2459253-2459483 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 161

Conread position: 32-267
Cow position: chr5:50947902-50948144 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 32-274
Cow position: chr5:24152039-24152286 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 32-274
Cow position: chr5:73487797-73487549 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 32-276
Cow position: chr5:4386507-4386748 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 173, 48

Conread position: 32-286
Cow position: chr5:41960476-41960227 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 161

Conread position: 32-288
Cow position: chr5:28333215-28332954 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 6

Conread position: 32-289
Cow position: chr5:18560136-18559875 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 6

Conread position: 32-289
Cow position: chr5:24295885-24296143 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 34

Conread position: 32-290
Cow position: chr5:23831051-23830787 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 169

Conread position: 32-290
Cow position: chr5:24099927-24100183 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 24

Conread position: 32-290
Cow position: chr5:31707833-31708097 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-290
Cow position: chr5:46628111-46627864 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 82

Conread position: 32-291
Cow position: chr5:307143-306879 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 32-291
Cow position: chr5:987798-987533 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:3965719-3965989 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:10813480-10813215 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:26077922-26077658 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 32-291
Cow position: chr5:30580614-30580870 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 92

Conread position: 32-291
Cow position: chr5:40131332-40131067 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:41376584-41376319 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:48807463-48807196 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position: chr5:76096324-76096587 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 68

Conread position: 32-298
Cow position: chr5:3502838-3502564 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 32-298
Cow position: chr5:4017928-4017672 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 164

Conread position: 32-298
Cow position: chr5:4070488-4070758 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 32-298
Cow position: chr5:4684534-4684263 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 99

Conread position: 32-298
Cow position: chr5:4756913-4756641 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:6587318-6587046 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 32-298
Cow position: chr5:7142794-7142531 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 13

Conread position: 32-298
Cow position: chr5:10774993-10774721 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:10842111-10841838 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 232

Conread position: 32-298
Cow position: chr5:10855547-10855276 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 150

Conread position: 32-298
Cow position: chr5:12731444-12731173 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 32-298
Cow position: chr5:18121212-18120940 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:18549433-18549690 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 12

Conread position: 32-298
Cow position: chr5:23959060-23958788 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:27197879-27198150 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 240

Conread position: 32-298
Cow position: chr5:31100158-31099894 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 6

Conread position: 32-298
Cow position: chr5:32774035-32774307 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:34201672-34201398 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 12

Conread position: 32-298
Cow position: chr5:35301368-35301640 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:37733619-37733895 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:40758196-40758462 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 32-298
Cow position: chr5:45701580-45701859 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 6

Conread position: 32-298
Cow position: chr5:46737319-46737052 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 6

Conread position: 32-298
Cow position: chr5:46777663-46777935 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position: chr5:49223222-49222948 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 160

Conread position: 32-298
Cow position: chr5:58197286-58197558 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 33-274
Cow position: chr5:52435011-52435254 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 112

Conread position: 33-279
Cow position: chr5:59283587-59283839 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 33-290
Cow position: chr5:53946102-53946362 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 28

Conread position: 33-291
Cow position: chr5:35527200-35527460 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 60

Conread position: 35-292
Cow position: chr5:34190187-34190458 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 37-298
Cow position: chr5:40923377-40923133 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 54

Conread position: 38-180
Cow position: chr5:32281502-32281355 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 38-240
Cow position: chr5:29767399-29767599 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 72

Conread position: 38-247
Cow position: chr5:7227136-7227339 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 167, 37

Conread position: 38-276
Cow position: chr5:49757431-49757189 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 128

Conread position: 38-291
Cow position: chr5:31122311-31122052 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 38-291
Cow position: chr5:46004598-46004342 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 38-298
Cow position: chr5:2975066-2975332 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 38-298
Cow position: chr5:47829802-47829533 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 38-298
Cow position: chr5:50870893-50871149 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 56

Conread position: 38-298
Cow position: chr5:59061912-59062178 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 161

Conread position: 39-217
Cow position: chr5:49519825-49520009 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 40-290
Cow position: chr5:32166863-32166609 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 154

Conread position: 40-294
Cow position: chr5:23230262-23230517 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 86

Conread position: 45-273
Cow position: chr5:46669206-46669450 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 45-286
Cow position: chr5:23686628-23686391 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 13

Conread position: 45-288
Cow position: chr5:7275116-7275363 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 180

Conread position: 45-290
Cow position: chr5:18274038-18274282 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 216

Conread position: 45-298
Cow position: chr5:55629270-55629525 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 151

Conread position: 45-301
Cow position: chr5:54620328-54620591 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 125

Conread position: 45-368
Cow position: chr5:18665052-18665384 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 46-298
Cow position: chr5:5104499-5104757 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 58

Conread position: 47-292
Cow position: chr5:29434469-29434227 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 100

Conread position: 49-256
Cow position: chr5:18114272-18114066 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 106

Conread position: 49-298
Cow position: chr5:12681757-12681512 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 53-203
Cow position: chr5:32952188-32952340 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 87

Conread position: 53-291
Cow position: chr5:57816402-57816158 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 53-298
Cow position: chr5:2915725-2915976 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 53-298
Cow position: chr5:37378417-37378668 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 54-197
Cow position: chr5:51308568-51308428 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 68

Conread position: 54-285
Cow position: chr5:23755184-23754953 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 20

Conread position: 54-298
Cow position: chr5:14658159-14657910 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 42

Conread position: 57-280
Cow position: chr5:41527504-41527274 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 198

Conread position: 59-254
Cow position: chr5:3822256-3822448 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 32

Conread position: 59-269
Cow position: chr5:1340746-1340533 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 16

Conread position: 59-273
Cow position: chr5:15375982-15376202 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 59-279
Cow position: chr5:46808600-46808825 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 212

Conread position: 59-298
Cow position: chr5:7810951-7810708 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 66

Conread position: 59-298
Cow position: chr5:18400401-18400162 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 70-298
Cow position: chr5:5666271-5666049 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 33

Conread position: 77-298
Cow position: chr5:11115452-11115232 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 44

Conread position: 78-298
Cow position: chr5:13046959-13047180 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 195

Conread position: 79-298
Cow position: chr5:47893239-47893026 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 127, 36

Conread position: 85-291
Cow position: chr5:20108228-20108436 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 94-298
Cow position: chr5:43988438-43988640 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 149

Conread position: 98-298
Cow position: chr5:34697990-34698193 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 103-298
Cow position: chr5:20310851-20310655 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 165

Conread position: 105-291
Cow position: chr5:16102720-16102534 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 32

Conread position: 117-274
Cow position: chr5:1228153-1228310 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 9

Conread position: 120-274
Cow position: chr5:3254245-3254088 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 120-290
Cow position: chr5:54860611-54860441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 131

Conread position: 132-291
Cow position: chr5:46646350-46646511 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 134-291
Cow position: chr5:12642058-12641898 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 132
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 142-274
Cow position: chr5:3424743-3424874 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 32

Conread position: 145-298
Cow position: chr5:58191374-58191218 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 154-290
Cow position: chr5:54787739-54787604 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 126

Conread position: 183-293
Cow position: chr5:37049229-37049340 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.