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Cow genome map

           
Conread name:
           
Ss1.1-rski0108_p17.5
        

               
Conread position:
               
130-558
               

               
Cow position:
               
chr13:13504556-13504104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
134-559
               

               
Cow position:
               
chr13:60973781-60974223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
136-345
               

               
Cow position:
               
chr13:8229867-8230084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
137-557
               

               
Cow position:
               
chr13:52057283-52057682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
141-314
               

               
Cow position:
               
chr13:37794685-37794858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
141-400
               

               
Cow position:
               
chr13:9492508-9492754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
145-488
               

               
Cow position:
               
chr13:6860900-6861251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 294
               

               
Conread position:
               
146-555
               

               
Cow position:
               
chr13:28552319-28552732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
147-438
               

               
Cow position:
               
chr13:49204738-49205019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
148-346
               

               
Cow position:
               
chr13:41474612-41474802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr13:47964444-47964057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
149-381
               

               
Cow position:
               
chr13:13797086-13796846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
149-396
               

               
Cow position:
               
chr13:3594066-3594300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
149-442
               

               
Cow position:
               
chr13:56535206-56535481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
256, 9
               

               
Conread position:
               
149-559
               

               
Cow position:
               
chr13:17021993-17021589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
149-559
               

               
Cow position:
               
chr13:25537370-25537772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
151-559
               

               
Cow position:
               
chr13:21275592-21275995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
152-409
               

               
Cow position:
               
chr13:28439151-28439403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
152-556
               

               
Cow position:
               
chr13:28689207-28689605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
152-559
               

               
Cow position:
               
chr13:44003439-44003859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
154-427
               

               
Cow position:
               
chr13:33974485-33974744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr13:19188050-19188441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
155-307
               

               
Cow position:
               
chr13:24644944-24645093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
155-369
               

               
Cow position:
               
chr13:42203770-42203978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr13:16163326-16163554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
156-414
               

               
Cow position:
               
chr13:10210914-10210661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
157-469
               

               
Cow position:
               
chr13:52459732-52459432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
157-559
               

               
Cow position:
               
chr13:12282573-12282974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
158-299
               

               
Cow position:
               
chr13:20654122-20653975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:6113787-6113560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
158-512
               

               
Cow position:
               
chr13:12770450-12770098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr13:31808260-31808652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
159-369
               

               
Cow position:
               
chr13:53619744-53619957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
159-376
               

               
Cow position:
               
chr13:18997138-18997348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 126
               

               
Conread position:
               
159-386
               

               
Cow position:
               
chr13:26422783-26423021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
159-508
               

               
Cow position:
               
chr13:45073504-45073168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
160-366
               

               
Cow position:
               
chr13:27871514-27871723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
161-386
               

               
Cow position:
               
chr13:56019246-56019025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
161-555
               

               
Cow position:
               
chr13:18999275-18999678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
161-559
               

               
Cow position:
               
chr13:311177-311570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
161-559
               

               
Cow position:
               
chr13:13954653-13954248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 164
               

               
Conread position:
               
161-559
               

               
Cow position:
               
chr13:40722935-40722569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
304, 20
               

               
Conread position:
               
162-369
               

               
Cow position:
               
chr13:42613836-42614037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
162-375
               

               
Cow position:
               
chr13:28605649-28605431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
163-345
               

               
Cow position:
               
chr13:6996897-6997082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
163-444
               

               
Cow position:
               
chr13:45439279-45439550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
163-536
               

               
Cow position:
               
chr13:5168879-5169254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
163-548
               

               
Cow position:
               
chr13:51940493-51940865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr13:20360022-20360410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
164-371
               

               
Cow position:
               
chr13:57929811-57929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
164-388
               

               
Cow position:
               
chr13:11146802-11147029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
164-414
               

               
Cow position:
               
chr13:17813218-17813469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
164-431
               

               
Cow position:
               
chr13:55765432-55765163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
164-474
               

               
Cow position:
               
chr13:19007691-19007987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
165-462
               

               
Cow position:
               
chr13:55494769-55494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 33
               

               
Conread position:
               
165-544
               

               
Cow position:
               
chr13:25435359-25434995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
165-559
               

               
Cow position:
               
chr13:20473926-20473551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
166-371
               

               
Cow position:
               
chr13:34300098-34299907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
166-538
               

               
Cow position:
               
chr13:15194972-15194613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
167-380
               

               
Cow position:
               
chr13:38335126-38334912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
167-430
               

               
Cow position:
               
chr13:9707998-9707735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
167-544
               

               
Cow position:
               
chr13:14063767-14063397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
167-557
               

               
Cow position:
               
chr13:19393046-19393427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
167-559
               

               
Cow position:
               
chr13:7075991-7076395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 240
               

               
Conread position:
               
167-559
               

               
Cow position:
               
chr13:17292380-17291993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr13:12292176-12291996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
168-425
               

               
Cow position:
               
chr13:11933851-11933594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr13:14879205-14878818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 153
               

               
Conread position:
               
169-362
               

               
Cow position:
               
chr13:10055170-10055367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
169-475
               

               
Cow position:
               
chr13:19427386-19427696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
169-559
               

               
Cow position:
               
chr13:20880070-20879691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
170-446
               

               
Cow position:
               
chr13:33054621-33054343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
170-559
               

               
Cow position:
               
chr13:13338610-13339000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
170-559
               

               
Cow position:
               
chr13:15289166-15288789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
170-559
               

               
Cow position:
               
chr13:24753644-24754021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
171-371
               

               
Cow position:
               
chr13:15162876-15162676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
171-556
               

               
Cow position:
               
chr13:30798465-30798860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
172-346
               

               
Cow position:
               
chr13:26097938-26098111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr13:10511952-10511741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr13:16476609-16476831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 216
               

               
Conread position:
               
172-392
               

               
Cow position:
               
chr13:13780936-13781155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
172-496
               

               
Cow position:
               
chr13:39939811-39939490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:16203419-16203762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
173-297
               

               
Cow position:
               
chr13:20838340-20838213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
173-303
               

               
Cow position:
               
chr13:12302627-12302498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
173-333
               

               
Cow position:
               
chr13:12707492-12707338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
173-343
               

               
Cow position:
               
chr13:62260278-62260439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
173-358
               

               
Cow position:
               
chr13:21886926-21886735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr13:6951334-6951529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr13:33518203-33518000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
173-385
               

               
Cow position:
               
chr13:52464497-52464710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
173-392
               

               
Cow position:
               
chr13:32186022-32186258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr13:55080899-55081146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
173-423
               

               
Cow position:
               
chr13:47676182-47675928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr13:15996793-15997050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr13:8350059-8350373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
173-504
               

               
Cow position:
               
chr13:46043930-46044243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
173-537
               

               
Cow position:
               
chr13:21136156-21135782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 280
               

               
Conread position:
               
173-548
               

               
Cow position:
               
chr13:21280744-21280358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
173-557
               

               
Cow position:
               
chr13:9800276-9800647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr13:9266078-9265692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr13:13260748-13261144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 206
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr13:17450844-17451234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr13:45352785-45353186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr13:8682209-8682391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr13:40483218-40483026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
174-407
               

               
Cow position:
               
chr13:53850575-53850815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
174-411
               

               
Cow position:
               
chr13:33854921-33854690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr13:18994883-18995256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
174-558
               

               
Cow position:
               
chr13:14016795-14016430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
350, 15
               

               
Conread position:
               
174-559
               

               
Cow position:
               
chr13:20606364-20605979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
175-349
               

               
Cow position:
               
chr13:242391-242568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
175-362
               

               
Cow position:
               
chr13:5660007-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
175-376
               

               
Cow position:
               
chr13:24107789-24107588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
175-425
               

               
Cow position:
               
chr13:41189857-41190114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
175-469
               

               
Cow position:
               
chr13:52641192-52640900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
175-519
               

               
Cow position:
               
chr13:38873197-38872852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
175-524
               

               
Cow position:
               
chr13:12974579-12974907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
175-558
               

               
Cow position:
               
chr13:38697816-38698190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr13:17569337-17568959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 28
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr13:44626124-44626512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
176-350
               

               
Cow position:
               
chr13:2529190-2529016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
176-352
               

               
Cow position:
               
chr13:20698527-20698347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr13:37614438-37614190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
176-471
               

               
Cow position:
               
chr13:1147389-1147099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
176-478
               

               
Cow position:
               
chr13:17823192-17822892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
176-488
               

               
Cow position:
               
chr13:55161966-55162280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
176-544
               

               
Cow position:
               
chr13:49795798-49796143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
326, 108
               

               
Conread position:
               
176-556
               

               
Cow position:
               
chr13:20509486-20509869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 243
               

               
Conread position:
               
176-556
               

               
Cow position:
               
chr13:40651703-40652070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
177-342
               

               
Cow position:
               
chr13:62304326-62304497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chr13:25924468-25924290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
177-353
               

               
Cow position:
               
chr13:8312481-8312320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr13:52011084-52010890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
177-365
               

               
Cow position:
               
chr13:38683263-38683067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
177-371
               

               
Cow position:
               
chr13:37946625-37946434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
177-382
               

               
Cow position:
               
chr13:6865903-6865699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
177-385
               

               
Cow position:
               
chr13:9124689-9124893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr13:21246951-21246737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr13:29805250-29805048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
177-389
               

               
Cow position:
               
chr13:8537581-8537795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr13:51249615-51249395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
177-409
               

               
Cow position:
               
chr13:17058094-17057855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
177-415
               

               
Cow position:
               
chr13:33868174-33868418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
177-432
               

               
Cow position:
               
chr13:3209563-3209305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr13:14927024-14927277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
177-463
               

               
Cow position:
               
chr13:29662778-29663074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 237
               

               
Conread position:
               
177-464
               

               
Cow position:
               
chr13:585113-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 210
               

               
Conread position:
               
177-466
               

               
Cow position:
               
chr13:41157155-41157450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 263
               

               
Conread position:
               
177-524
               

               
Cow position:
               
chr13:7265342-7265020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
177-557
               

               
Cow position:
               
chr13:38329380-38329764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 21
               

               
Conread position:
               
177-557
               

               
Cow position:
               
chr13:57475656-57475278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr13:8245550-8245196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
216, 18
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr13:13238341-13238717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr13:33281782-33282150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr13:34729078-34728697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr13:43479822-43480197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
178-332
               

               
Cow position:
               
chr13:48165976-48165830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
178-350
               

               
Cow position:
               
chr13:43102742-43102917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
178-370
               

               
Cow position:
               
chr13:10423283-10423475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr13:25679088-25679277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
178-373
               

               
Cow position:
               
chr13:17975199-17975006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr13:2393146-2393346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
178-381
               

               
Cow position:
               
chr13:23685243-23685034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr13:48126867-48127074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
178-390
               

               
Cow position:
               
chr13:390874-390668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr13:2907066-2907275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
178-394
               

               
Cow position:
               
chr13:5992608-5992831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr13:57770221-57770007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
178-399
               

               
Cow position:
               
chr13:39398404-39398634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
178-400
               

               
Cow position:
               
chr13:21188143-21188352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr13:13283097-13283332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
178-424
               

               
Cow position:
               
chr13:52881122-52880860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 201
               

               
Conread position:
               
178-438
               

               
Cow position:
               
chr13:50646869-50646614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
178-449
               

               
Cow position:
               
chr13:33601470-33601200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
178-474
               

               
Cow position:
               
chr13:41550041-41549732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
178-499
               

               
Cow position:
               
chr13:7148999-7149308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 56
               

               
Conread position:
               
178-501
               

               
Cow position:
               
chr13:20137580-20137906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr13:40490978-40491301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
178-526
               

               
Cow position:
               
chr13:20154756-20155107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
178-537
               

               
Cow position:
               
chr13:27550495-27550857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
178-553
               

               
Cow position:
               
chr13:25579430-25579053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
178-558
               

               
Cow position:
               
chr13:866898-867266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:151729-152094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:3315924-3315538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:6087134-6086764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:17971277-17970888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:32282887-32283264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr13:46111730-46112107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
179-366
               

               
Cow position:
               
chr13:47538387-47538210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
179-368
               

               
Cow position:
               
chr13:23823264-23823082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
179-385
               

               
Cow position:
               
chr13:369359-369154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
179-388
               

               
Cow position:
               
chr13:23975404-23975195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr13:8393119-8392920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
179-396
               

               
Cow position:
               
chr13:37555108-37554894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
179-512
               

               
Cow position:
               
chr13:17497982-17498310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
179-544
               

               
Cow position:
               
chr13:5758568-5758216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
179-546
               

               
Cow position:
               
chr13:25380708-25381089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
179-547
               

               
Cow position:
               
chr13:38284207-38283858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
179-558
               

               
Cow position:
               
chr13:10925164-10924765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr13:5671822-5671452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr13:6079641-6079279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr13:42113776-42114161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr13:45074138-45073788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr13:54701947-54702327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
180-367
               

               
Cow position:
               
chr13:10757904-10758078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
180-426
               

               
Cow position:
               
chr13:45593685-45593928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
180-531
               

               
Cow position:
               
chr13:19278862-19279203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr13:17114616-17114239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
181-319
               

               
Cow position:
               
chr13:52188711-52188855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
181-352
               

               
Cow position:
               
chr13:14782110-14782278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
181-362
               

               
Cow position:
               
chr13:23795615-23795442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
181-376
               

               
Cow position:
               
chr13:22046242-22046048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
181-379
               

               
Cow position:
               
chr13:17619645-17619855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
181-399
               

               
Cow position:
               
chr13:42302275-42302057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
181-425
               

               
Cow position:
               
chr13:34873355-34873598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
181-517
               

               
Cow position:
               
chr13:13554569-13554225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
181-558
               

               
Cow position:
               
chr13:3160167-3160530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
186, 104
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr13:13501847-13501483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr13:19024086-19023704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr13:19582315-19581947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr13:20881157-20880786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr13:58043386-58043769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
182-352
               

               
Cow position:
               
chr13:20413787-20413612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
182-369
               

               
Cow position:
               
chr13:16096340-16096527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
182-374
               

               
Cow position:
               
chr13:19177937-19178136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr13:31507676-31507464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
182-426
               

               
Cow position:
               
chr13:32017752-32017501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 141
               

               
Conread position:
               
182-426
               

               
Cow position:
               
chr13:49356282-49356039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
182-431
               

               
Cow position:
               
chr13:45130280-45130532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
182-493
               

               
Cow position:
               
chr13:33955256-33954956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
182-522
               

               
Cow position:
               
chr13:11820926-11821256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
182-548
               

               
Cow position:
               
chr13:11260043-11260398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 106
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr13:1363450-1363834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr13:19223418-19223785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr13:29831666-29831293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr13:33256264-33256636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr13:8232802-8232644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr13:55327208-55327372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
183-362
               

               
Cow position:
               
chr13:9551129-9551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
183-368
               

               
Cow position:
               
chr13:22729639-22729450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
183-371
               

               
Cow position:
               
chr13:10279690-10279881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
183-371
               

               
Cow position:
               
chr13:21009592-21009793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr13:17135448-17135253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr13:26960030-26959831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 20
               

               
Conread position:
               
183-388
               

               
Cow position:
               
chr13:18970750-18970948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
183-393
               

               
Cow position:
               
chr13:20789752-20789533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr13:11410475-11410697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
183-417
               

               
Cow position:
               
chr13:50768358-50768597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 198
               

               
Conread position:
               
183-423
               

               
Cow position:
               
chr13:15144066-15143836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
183-435
               

               
Cow position:
               
chr13:21981203-21980956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 93
               

               
Conread position:
               
183-447
               

               
Cow position:
               
chr13:43525481-43525205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
183-470
               

               
Cow position:
               
chr13:17611784-17611499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr13:50601941-50601647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
183-496
               

               
Cow position:
               
chr13:21170297-21170607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 20
               

               
Conread position:
               
183-512
               

               
Cow position:
               
chr13:56035091-56034766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
183-531
               

               
Cow position:
               
chr13:6189832-6189504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
183-535
               

               
Cow position:
               
chr13:20358119-20357777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 84
               

               
Conread position:
               
183-536
               

               
Cow position:
               
chr13:1231408-1231764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:2822632-2822999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:7059223-7059611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:10845386-10845733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:12876210-12875832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 153
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:17745024-17745379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:17855133-17855510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 251
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr13:52893914-52894284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
184-315
               

               
Cow position:
               
chr13:25082867-25082998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
184-369
               

               
Cow position:
               
chr13:43811696-43811893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
184-371
               

               
Cow position:
               
chr13:37405483-37405666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
184-372
               

               
Cow position:
               
chr13:6091641-6091452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
184-376
               

               
Cow position:
               
chr13:53357595-53357793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr13:29802397-29802581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr13:21024748-21024956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr13:84357-84581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr13:12923638-12923884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
184-434
               

               
Cow position:
               
chr13:15083428-15083677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
184-435
               

               
Cow position:
               
chr13:50457619-50457878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 224
               

               
Conread position:
               
184-462
               

               
Cow position:
               
chr13:28440768-28440492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
184-486
               

               
Cow position:
               
chr13:620475-620186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr13:10040789-10040453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr13:13471654-13471328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
184-542
               

               
Cow position:
               
chr13:5911124-5910773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr13:37593177-37592798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr13:43595337-43594975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr13:49023097-49022734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr13:49804756-49805111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
336, 50
               

               
Conread position:
               
185-335
               

               
Cow position:
               
chr13:6971608-6971759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr13:38702867-38702669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr13:45499000-45499189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr13:47340097-47340284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
185-392
               

               
Cow position:
               
chr13:10986740-10986524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
185-403
               

               
Cow position:
               
chr13:17845250-17845475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
185-423
               

               
Cow position:
               
chr13:28536554-28536315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 197
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chr13:15993149-15993394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
185-427
               

               
Cow position:
               
chr13:62369430-62369680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
185-447
               

               
Cow position:
               
chr13:6183663-6183390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
185-455
               

               
Cow position:
               
chr13:38035608-38035872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
185-508
               

               
Cow position:
               
chr13:37775437-37775120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
281, 132
               

               
Conread position:
               
185-558
               

               
Cow position:
               
chr13:11321830-11321477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
205, 18
               

               
Conread position:
               
185-558
               

               
Cow position:
               
chr13:25495780-25496145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
185-558
               

               
Cow position:
               
chr13:54389247-54388882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr13:12045580-12045198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 250
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr13:26480432-26480073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr13:26698725-26698357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 15
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr13:37069112-37069489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr13:60509360-60508979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 254
               

               
Conread position:
               
186-330
               

               
Cow position:
               
chr13:52929200-52929349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
186-345
               

               
Cow position:
               
chr13:25061952-25062106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr13:20854692-20854520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
186-355
               

               
Cow position:
               
chr13:47651643-47651477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
186-372
               

               
Cow position:
               
chr13:14351351-14351538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
186-373
               

               
Cow position:
               
chr13:13503287-13503474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 64
               

               
Conread position:
               
186-374
               

               
Cow position:
               
chr13:57322920-57323104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
186-388
               

               
Cow position:
               
chr13:30148783-30148591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
186-425
               

               
Cow position:
               
chr13:18340300-18340542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
186-530
               

               
Cow position:
               
chr13:10220725-10221060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
24, 198
               

               
Conread position:
               
186-554
               

               
Cow position:
               
chr13:44322663-44323035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
186-557
               

               
Cow position:
               
chr13:20666626-20666251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
186-558
               

               
Cow position:
               
chr13:11808351-11808697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
186-558
               

               
Cow position:
               
chr13:20893874-20893500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 129
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr13:6930691-6931055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr13:18058477-18058109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 110
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr13:18491377-18491739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr13:23512150-23512507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
187-353
               

               
Cow position:
               
chr13:58157284-58157120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
187-365
               

               
Cow position:
               
chr13:30693333-30693518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
187-376
               

               
Cow position:
               
chr13:37030120-37030302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
187-388
               

               
Cow position:
               
chr13:1322432-1322633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 140
               

               
Conread position:
               
187-426
               

               
Cow position:
               
chr13:14411663-14411905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
187-427
               

               
Cow position:
               
chr13:20519845-20520072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
187-546
               

               
Cow position:
               
chr13:14575983-14576334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
187-548
               

               
Cow position:
               
chr13:58763838-58763503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr13:6616995-6616612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 252
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr13:24229981-24230352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr13:34281453-34281816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
188-315
               

               
Cow position:
               
chr13:15529473-15529350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
188-338
               

               
Cow position:
               
chr13:9612847-9612991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
188-365
               

               
Cow position:
               
chr13:26377651-26377467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
188-371
               

               
Cow position:
               
chr13:14795982-14796164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
188-371
               

               
Cow position:
               
chr13:19222443-19222628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
188-372
               

               
Cow position:
               
chr13:1339372-1339185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
188-419
               

               
Cow position:
               
chr13:30315272-30315510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 224
               

               
Conread position:
               
188-425
               

               
Cow position:
               
chr13:27180807-27181050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
188-439
               

               
Cow position:
               
chr13:42640153-42640405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
188-442
               

               
Cow position:
               
chr13:11434801-11434549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
188-469
               

               
Cow position:
               
chr13:17089740-17089473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
188-479
               

               
Cow position:
               
chr13:11103437-11103131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 267
               

               
Conread position:
               
188-508
               

               
Cow position:
               
chr13:52477873-52477557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
188-530
               

               
Cow position:
               
chr13:34533157-34532818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
188-533
               

               
Cow position:
               
chr13:47322620-47322290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
239, 34
               

               
Conread position:
               
188-542
               

               
Cow position:
               
chr13:60375716-60375365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
188-549
               

               
Cow position:
               
chr13:15349478-15349132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
188-558
               

               
Cow position:
               
chr13:15991459-15991087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr13:5279438-5279045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
189-297
               

               
Cow position:
               
chr13:21182921-21182812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
189-322
               

               
Cow position:
               
chr13:34606462-34606599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
189-322
               

               
Cow position:
               
chr13:47613086-47612955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
189-345
               

               
Cow position:
               
chr13:27726976-27727122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
189-348
               

               
Cow position:
               
chr13:20042490-20042328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
189-350
               

               
Cow position:
               
chr13:3388022-3387854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
189-352
               

               
Cow position:
               
chr13:51106897-51107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
189-364
               

               
Cow position:
               
chr13:29665794-29665969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr13:43342340-43342517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
189-369
               

               
Cow position:
               
chr13:54236582-54236760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
189-370
               

               
Cow position:
               
chr13:4965174-4965344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
189-370
               

               
Cow position:
               
chr13:6969795-6969598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
189-370
               

               
Cow position:
               
chr13:41979364-41979191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr13:28695631-28695815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr13:47643822-47644019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
189-372
               

               
Cow position:
               
chr13:48373543-48373362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
189-374
               

               
Cow position:
               
chr13:28081489-28081680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
189-374
               

               
Cow position:
               
chr13:55713652-55713478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
189-386
               

               
Cow position:
               
chr13:17994600-17994403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 122
               

               
Conread position:
               
189-388
               

               
Cow position:
               
chr13:3153520-3153722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
189-388
               

               
Cow position:
               
chr13:24094544-24094345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
91, 109
               

               
Conread position:
               
189-393
               

               
Cow position:
               
chr13:6012945-6012746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
168, 8
               

               
Conread position:
               
189-395
               

               
Cow position:
               
chr13:16099356-16099142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
189-398
               

               
Cow position:
               
chr13:2233525-2233322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
189-402
               

               
Cow position:
               
chr13:53865407-53865622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
189-425
               

               
Cow position:
               
chr13:25941489-25941255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
189-435
               

               
Cow position:
               
chr13:40541338-40541086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 219
               

               
Conread position:
               
189-477
               

               
Cow position:
               
chr13:20534673-20534953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 45
               

               
Conread position:
               
189-485
               

               
Cow position:
               
chr13:15239740-15239454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
189-512
               

               
Cow position:
               
chr13:25978420-25978098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
189-519
               

               
Cow position:
               
chr13:54286949-54286634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
189-521
               

               
Cow position:
               
chr13:4158430-4158765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
189-521
               

               
Cow position:
               
chr13:54128822-54128492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
189-547
               

               
Cow position:
               
chr13:53573752-53574098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
189-557
               

               
Cow position:
               
chr13:8362971-8362612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:1170231-1170607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 118
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:15872210-15872584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:20157501-20157869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:20261559-20261186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:28139353-28139705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr13:55582967-55583334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:5263503-5263152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 16
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:15041703-15041332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 216
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:15868882-15869261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 245
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:41155282-41154892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 214
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:51528663-51528305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:52749690-52749341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
329, 64
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr13:54582647-54583017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 159
               

               
Conread position:
               
189-562
               

               
Cow position:
               
chr13:21269810-21269437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
190-311
               

               
Cow position:
               
chr13:40794565-40794447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
190-338
               

               
Cow position:
               
chr13:27146591-27146746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
190-350
               

               
Cow position:
               
chr13:17815018-17815172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
190-355
               

               
Cow position:
               
chr13:53847346-53847182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr13:23478674-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
190-370
               

               
Cow position:
               
chr13:7097360-7097541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
190-372
               

               
Cow position:
               
chr13:4790349-4790162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
190-379
               

               
Cow position:
               
chr13:17624089-17624285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
190-385
               

               
Cow position:
               
chr13:1363235-1363424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
190-458
               

               
Cow position:
               
chr13:57986160-57985891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
190-469
               

               
Cow position:
               
chr13:16020632-16020902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
190-522
               

               
Cow position:
               
chr13:13196013-13196343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
190-547
               

               
Cow position:
               
chr13:20217624-20217260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
190-558
               

               
Cow position:
               
chr13:10989299-10988936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
190-558
               

               
Cow position:
               
chr13:12449207-12448853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr13:4209031-4208678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr13:21106920-21107278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr13:34375036-34375410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr13:37818971-37818609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
191-326
               

               
Cow position:
               
chr13:58388482-58388612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
191-352
               

               
Cow position:
               
chr13:15114244-15114407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
191-375
               

               
Cow position:
               
chr13:55775138-55775319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
191-401
               

               
Cow position:
               
chr13:8637467-8637683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
191-536
               

               
Cow position:
               
chr13:19240214-19240553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
193, 65
               

               
Conread position:
               
191-556
               

               
Cow position:
               
chr13:25695992-25695631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
191-558
               

               
Cow position:
               
chr13:20497417-20497788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr13:12670677-12670308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr13:52198881-52199226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr13:10522715-10522932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr13:15069748-15069972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
192-480
               

               
Cow position:
               
chr13:18197833-18197546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 208
               

               
Conread position:
               
192-522
               

               
Cow position:
               
chr13:16038508-16038190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
192-558
               

               
Cow position:
               
chr13:44278122-44278492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
192-559
               

               
Cow position:
               
chr13:58524719-58525074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 11
               

               
Conread position:
               
193-350
               

               
Cow position:
               
chr13:4135656-4135817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
193-395
               

               
Cow position:
               
chr13:16789988-16790188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
193-425
               

               
Cow position:
               
chr13:54145705-54145467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 190
               

               
Conread position:
               
193-426
               

               
Cow position:
               
chr13:48222774-48222538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
193-544
               

               
Cow position:
               
chr13:48252191-48251859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
193-549
               

               
Cow position:
               
chr13:20466490-20466154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
193-558
               

               
Cow position:
               
chr13:26742903-26743262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
194-324
               

               
Cow position:
               
chr13:30809597-30809465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
194-352
               

               
Cow position:
               
chr13:11439246-11439091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
194-365
               

               
Cow position:
               
chr13:21955291-21955116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
194-371
               

               
Cow position:
               
chr13:20440835-20440660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr13:52177380-52177570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
183, 105
               

               
Conread position:
               
194-388
               

               
Cow position:
               
chr13:54652530-54652353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
194-437
               

               
Cow position:
               
chr13:13775475-13775224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 236
               

               
Conread position:
               
194-489
               

               
Cow position:
               
chr13:42672654-42672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 242
               

               
Conread position:
               
194-555
               

               
Cow position:
               
chr13:6848700-6849066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
194-555
               

               
Cow position:
               
chr13:17821479-17821132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
194-559
               

               
Cow position:
               
chr13:19033330-19033692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
195-335
               

               
Cow position:
               
chr13:46330159-46330017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
195-382
               

               
Cow position:
               
chr13:18215138-18215332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
195-435
               

               
Cow position:
               
chr13:40154960-40154710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
195-545
               

               
Cow position:
               
chr13:972118-971767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 167
               

               
Conread position:
               
195-555
               

               
Cow position:
               
chr13:47186009-47186360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
196-365
               

               
Cow position:
               
chr13:11231516-11231345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
196-376
               

               
Cow position:
               
chr13:20876140-20875957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
196-382
               

               
Cow position:
               
chr13:5092614-5092428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
196-404
               

               
Cow position:
               
chr13:50623031-50622824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
196-423
               

               
Cow position:
               
chr13:16907993-16908224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
196-432
               

               
Cow position:
               
chr13:9161712-9161938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
196-459
               

               
Cow position:
               
chr13:7149719-7149473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
196-517
               

               
Cow position:
               
chr13:7312941-7312601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
196-536
               

               
Cow position:
               
chr13:16247424-16247775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
196-538
               

               
Cow position:
               
chr13:49457480-49457793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
196-545
               

               
Cow position:
               
chr13:15945271-15945604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
196-548
               

               
Cow position:
               
chr13:54094607-54094940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
240, 74
               

               
Conread position:
               
196-558
               

               
Cow position:
               
chr13:21235888-21235548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr13:12989642-12989984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 60
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr13:18166512-18166870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 0
               

               
Conread position:
               
197-471
               

               
Cow position:
               
chr13:25504316-25504585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr13:626371-626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
309, 54
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr13:15233727-15234054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
198-328
               

               
Cow position:
               
chr13:4037704-4037832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
198-349
               

               
Cow position:
               
chr13:17015339-17015192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
198-350
               

               
Cow position:
               
chr13:48378739-48378596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
198-352
               

               
Cow position:
               
chr13:38395936-38396093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr13:5930529-5930356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr13:9327311-9327137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
198-369
               

               
Cow position:
               
chr13:58662023-58662204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
198-370
               

               
Cow position:
               
chr13:5175381-5175551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
198-371
               

               
Cow position:
               
chr13:32914480-32914301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
198-371
               

               
Cow position:
               
chr13:55143056-55143228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
198-375
               

               
Cow position:
               
chr13:13265346-13265520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr13:8367500-8367675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr13:20510800-20510981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
198-385
               

               
Cow position:
               
chr13:11942393-11942210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
198-385
               

               
Cow position:
               
chr13:48370518-48370330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr13:1539018-1539213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr13:22601904-22601713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr13:49283996-49283792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr13:43788066-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr13:43839905-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
198-426
               

               
Cow position:
               
chr13:43183026-43183259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
198-434
               

               
Cow position:
               
chr13:37621593-37621342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
198-478
               

               
Cow position:
               
chr13:26726828-26726545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 225
               

               
Conread position:
               
198-483
               

               
Cow position:
               
chr13:20314843-20314555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
198-501
               

               
Cow position:
               
chr13:19610784-19610483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
198-529
               

               
Cow position:
               
chr13:14967433-14967105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
198-544
               

               
Cow position:
               
chr13:35659536-35659878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 166
               

               
Conread position:
               
198-545
               

               
Cow position:
               
chr13:11201820-11202158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
198-547
               

               
Cow position:
               
chr13:18851870-18852208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 72
               

               
Conread position:
               
198-548
               

               
Cow position:
               
chr13:6973944-6974292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 116
               

               
Conread position:
               
198-551
               

               
Cow position:
               
chr13:24715031-24715376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr13:6540519-6540173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 76
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr13:19883252-19882899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr13:41806558-41806914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:607481-607125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 208
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:1155925-1155568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:1958806-1959147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:8374979-8374632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:23667039-23667395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 38
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:35526412-35526071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr13:52283689-52284045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
198-560
               

               
Cow position:
               
chr13:17159100-17158734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 238
               

               
Conread position:
               
199-344
               

               
Cow position:
               
chr13:28347865-28348011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr13:9108890-9108730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
199-375
               

               
Cow position:
               
chr13:21426036-21425871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
199-382
               

               
Cow position:
               
chr13:52249264-52249082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
199-397
               

               
Cow position:
               
chr13:54627264-54627469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 140
               

               
Conread position:
               
199-431
               

               
Cow position:
               
chr13:7046663-7046883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
199-488
               

               
Cow position:
               
chr13:14940580-14940871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
199-521
               

               
Cow position:
               
chr13:15621592-15621916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
199-537
               

               
Cow position:
               
chr13:5060521-5060863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
199-544
               

               
Cow position:
               
chr13:25817312-25817647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:4552609-4552943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
317, 20
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:15195418-15195064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 76
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:34263591-34263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:49503758-49503392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 247
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:52055810-52055459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:56686226-56686572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 30
               

               
Conread position:
               
200-375
               

               
Cow position:
               
chr13:14543919-14544094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr13:28376778-28376595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
200-390
               

               
Cow position:
               
chr13:25521140-25520941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
200-399
               

               
Cow position:
               
chr13:11565623-11565820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
200-411
               

               
Cow position:
               
chr13:21902188-21902387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
200-416
               

               
Cow position:
               
chr13:8450117-8450330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
200-419
               

               
Cow position:
               
chr13:15061706-15061478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
200-423
               

               
Cow position:
               
chr13:6486469-6486244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
200-440
               

               
Cow position:
               
chr13:47243768-47243532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
200-483
               

               
Cow position:
               
chr13:62007891-62008176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
200-521
               

               
Cow position:
               
chr13:46515843-46516162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr13:17977126-17977447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
200-547
               

               
Cow position:
               
chr13:42200404-42200746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
200-548
               

               
Cow position:
               
chr13:16014587-16014944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
200-553
               

               
Cow position:
               
chr13:12745474-12745805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
169, 28
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr13:20839364-20839703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr13:23961023-23960673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr13:36876849-36877212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 75
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr13:46525645-46525305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
201-493
               

               
Cow position:
               
chr13:20868959-20868682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
202-352
               

               
Cow position:
               
chr13:16106207-16106350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
202-369
               

               
Cow position:
               
chr13:27198700-27198861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
202-370
               

               
Cow position:
               
chr13:23399552-23399720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
202-391
               

               
Cow position:
               
chr13:22345489-22345302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
202-398
               

               
Cow position:
               
chr13:21277671-21277485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
202-475
               

               
Cow position:
               
chr13:45108615-45108356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
175, 72
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr13:13088818-13089159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 72
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr13:20174523-20174890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr13:20784380-20784728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 82
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr13:61977172-61976827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
203-315
               

               
Cow position:
               
chr13:23480790-23480683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
203-330
               

               
Cow position:
               
chr13:43577774-43577905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
203-337
               

               
Cow position:
               
chr13:19182883-19182749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-352
               

               
Cow position:
               
chr13:55007983-55007836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
203-361
               

               
Cow position:
               
chr13:56432034-56431880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
203-371
               

               
Cow position:
               
chr13:54128044-54127872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
203-371
               

               
Cow position:
               
chr13:54681880-54682058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
203-372
               

               
Cow position:
               
chr13:43576797-43576970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
203-388
               

               
Cow position:
               
chr13:6980712-6980891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
203-393
               

               
Cow position:
               
chr13:27028118-27027921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
203-396
               

               
Cow position:
               
chr13:52913663-52913853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
203-397
               

               
Cow position:
               
chr13:10711626-10711434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
203-423
               

               
Cow position:
               
chr13:7104445-7104661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
203-425
               

               
Cow position:
               
chr13:14644840-14645060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
203-425
               

               
Cow position:
               
chr13:37985961-37985735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
203-431
               

               
Cow position:
               
chr13:8232805-8233013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
203-431
               

               
Cow position:
               
chr13:24215890-24215658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 206
               

               
Conread position:
               
203-432
               

               
Cow position:
               
chr13:1462505-1462281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
203-536
               

               
Cow position:
               
chr13:57002509-57002845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 234
               

               
Conread position:
               
203-542
               

               
Cow position:
               
chr13:22085945-22085621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
203-543
               

               
Cow position:
               
chr13:39826342-39826677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
203-544
               

               
Cow position:
               
chr13:22115462-22115837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
203-553
               

               
Cow position:
               
chr13:9906515-9906867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 223
               

               
Conread position:
               
203-556
               

               
Cow position:
               
chr13:6663969-6663614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 165
               

               
Conread position:
               
203-556
               

               
Cow position:
               
chr13:20821050-20820699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 230
               

               
Conread position:
               
203-558
               

               
Cow position:
               
chr13:15193102-15192751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 173
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:2773902-2774267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 240
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:9975281-9974932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:18696610-18696982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 136
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:18989509-18989845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:21288298-21287950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:26262005-26261658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 228
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:34261022-34261372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:49823810-49824163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 184
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:55674423-55674069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 228
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr13:61188315-61188673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
204-352
               

               
Cow position:
               
chr13:5873646-5873495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
204-365
               

               
Cow position:
               
chr13:714676-714510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr13:13225684-13225843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr13:20520098-20520270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
204-376
               

               
Cow position:
               
chr13:24796671-24796838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr13:42849342-42849136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
204-425
               

               
Cow position:
               
chr13:8699955-8699728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
204-471
               

               
Cow position:
               
chr13:21171784-21171520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 225
               

               
Conread position:
               
204-474
               

               
Cow position:
               
chr13:17350131-17350408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr13:21242288-21241953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr13:45023435-45023072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
205-369
               

               
Cow position:
               
chr13:46298965-46298803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr13:26395248-26395417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr13:37723377-37723536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
205-390
               

               
Cow position:
               
chr13:17958629-17958810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr13:2776073-2776303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
205-435
               

               
Cow position:
               
chr13:19598876-19598647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
205-497
               

               
Cow position:
               
chr13:20115033-20115328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 236
               

               
Conread position:
               
205-521
               

               
Cow position:
               
chr13:24692747-24693053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr13:15257578-15257242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr13:47007924-47007590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
206-556
               

               
Cow position:
               
chr13:20288128-20288466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
206-559
               

               
Cow position:
               
chr13:27525469-27525125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
206-559
               

               
Cow position:
               
chr13:60966569-60966907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
296, 49
               

               
Conread position:
               
207-355
               

               
Cow position:
               
chr13:25313358-25313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
207-414
               

               
Cow position:
               
chr13:18093078-18092877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
207-427
               

               
Cow position:
               
chr13:6926303-6926528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
207-489
               

               
Cow position:
               
chr13:15756907-15757190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
207-519
               

               
Cow position:
               
chr13:46329812-46329504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr13:4665059-4664758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
207-542
               

               
Cow position:
               
chr13:1568725-1569046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
207-544
               

               
Cow position:
               
chr13:44201800-44202117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
207-547
               

               
Cow position:
               
chr13:59170435-59170786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 233
               

               
Conread position:
               
207-554
               

               
Cow position:
               
chr13:13320588-13320919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
207-558
               

               
Cow position:
               
chr13:37803670-37804019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 216
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr13:19022055-19022415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr13:24585839-24586181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr13:25926579-25926932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 257
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr13:48597700-48598050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 182
               

               
Conread position:
               
208-384
               

               
Cow position:
               
chr13:16525436-16525255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr13:50714938-50715121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr13:35557319-35557046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 242
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr13:1037429-1037605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-417
               

               
Cow position:
               
chr13:20795414-20795209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr13:52536364-52536567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
209-425
               

               
Cow position:
               
chr13:56958769-56958977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
209-479
               

               
Cow position:
               
chr13:12673495-12673237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
209-548
               

               
Cow position:
               
chr13:17338218-17338567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr13:52027341-52027147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
212-557
               

               
Cow position:
               
chr13:6442311-6441962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
212-559
               

               
Cow position:
               
chr13:26848035-26847680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
212-559
               

               
Cow position:
               
chr13:48375819-48375505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
215-543
               

               
Cow position:
               
chr13:52228299-52227976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
215-559
               

               
Cow position:
               
chr13:57494374-57494043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 62
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr13:57446313-57446170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr13:26109797-26109957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
216-425
               

               
Cow position:
               
chr13:4404334-4404540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr13:8667415-8667636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 173
               

               
Conread position:
               
216-512
               

               
Cow position:
               
chr13:50751252-50750961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
225, 52
               

               
Conread position:
               
216-521
               

               
Cow position:
               
chr13:49475871-49476187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 218
               

               
Conread position:
               
216-557
               

               
Cow position:
               
chr13:12206861-12207181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr13:15974418-15974754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr13:24369385-24369720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr13:48165623-48165285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 20
               

               
Conread position:
               
216-563
               

               
Cow position:
               
chr13:18929325-18929672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 141
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr13:38012140-38012325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
217-425
               

               
Cow position:
               
chr13:6465882-6465681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
217-471
               

               
Cow position:
               
chr13:20090566-20090325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
201, 82
               

               
Conread position:
               
217-493
               

               
Cow position:
               
chr13:19779054-19778775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
217-520
               

               
Cow position:
               
chr13:24155311-24155644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
217-548
               

               
Cow position:
               
chr13:20570529-20570859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
218-427
               

               
Cow position:
               
chr13:18615173-18615395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
219-520
               

               
Cow position:
               
chr13:16714463-16714161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
226-483
               

               
Cow position:
               
chr13:13211698-13211950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
232-559
               

               
Cow position:
               
chr13:43919450-43919120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 193
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr13:6976026-6975873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
236-559
               

               
Cow position:
               
chr13:547317-547625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 12
               

               
Conread position:
               
240-345
               

               
Cow position:
               
chr13:24288536-24288425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
240-393
               

               
Cow position:
               
chr13:13286547-13286401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
240-396
               

               
Cow position:
               
chr13:17716694-17716534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
240-414
               

               
Cow position:
               
chr13:38703055-38702878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
240-439
               

               
Cow position:
               
chr13:16160244-16160439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
241-508
               

               
Cow position:
               
chr13:20871218-20871478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
241-550
               

               
Cow position:
               
chr13:25547761-25547455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
241-559
               

               
Cow position:
               
chr13:23478853-23479166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 207
               

               
Conread position:
               
242-388
               

               
Cow position:
               
chr13:20531649-20531502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
242-396
               

               
Cow position:
               
chr13:9391389-9391540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
243-372
               

               
Cow position:
               
chr13:18701200-18701328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
248-487
               

               
Cow position:
               
chr13:17563573-17563804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
251-559
               

               
Cow position:
               
chr13:11381893-11381582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 224
               

               
Conread position:
               
258-468
               

               
Cow position:
               
chr13:37503744-37503532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr13:827088-827316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
261-473
               

               
Cow position:
               
chr13:51814087-51813881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
264-525
               

               
Cow position:
               
chr13:3989052-3989308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 32
               

               
Conread position:
               
264-559
               

               
Cow position:
               
chr13:1043114-1042821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
264-559
               

               
Cow position:
               
chr13:49520973-49520682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
264-560
               

               
Cow position:
               
chr13:7663574-7663283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
265-404
               

               
Cow position:
               
chr13:6962302-6962440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
266-559
               

               
Cow position:
               
chr13:10932402-10932688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
266-559
               

               
Cow position:
               
chr13:11643791-11644074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
266-559
               

               
Cow position:
               
chr13:43869262-43868976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
214, 34
               

               
Conread position:
               
266-560
               

               
Cow position:
               
chr13:20706355-20706065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
268-389
               

               
Cow position:
               
chr13:15808620-15808739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
268-530
               

               
Cow position:
               
chr13:19320382-19320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr13:40943093-40943384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
269-369
               

               
Cow position:
               
chr13:26365758-26365858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-370
               

               
Cow position:
               
chr13:19467484-19467384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
269-380
               

               
Cow position:
               
chr13:28652594-28652705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-381
               

               
Cow position:
               
chr13:20826871-20826758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
269-397
               

               
Cow position:
               
chr13:12237298-12237426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-425
               

               
Cow position:
               
chr13:19750568-19750724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
269-433
               

               
Cow position:
               
chr13:49255384-49255218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
269-490
               

               
Cow position:
               
chr13:5005853-5006063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
269-496
               

               
Cow position:
               
chr13:9981986-9981764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
269-507
               

               
Cow position:
               
chr13:42229166-42229407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
269-508
               

               
Cow position:
               
chr13:51901437-51901681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
269-514
               

               
Cow position:
               
chr13:13297532-13297769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
269-514
               

               
Cow position:
               
chr13:23525965-23526204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
269-543
               

               
Cow position:
               
chr13:37381654-37381930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
192, 150
               

               
Conread position:
               
269-547
               

               
Cow position:
               
chr13:23856064-23856340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
269-557
               

               
Cow position:
               
chr13:2413882-2414168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:4420183-4420487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 176
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:15282081-15281797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
235, 24
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:17346666-17346945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:17439915-17439630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:17799928-17800212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:18172189-18172478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:20679192-20679490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 167
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:21283851-21283570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
176, 158
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:23167248-23166956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:36771568-36771280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:37640445-37640726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:50739023-50739306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
228, 19
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:55316342-55316049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr13:60430226-60429934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
269-564
               

               
Cow position:
               
chr13:51116170-51115883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 19
               

               
Conread position:
               
270-399
               

               
Cow position:
               
chr13:1075185-1075056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-512
               

               
Cow position:
               
chr13:55727756-55727993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr13:5082505-5082790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr13:9802923-9803211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr13:12547054-12546770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
247, 149
               

               
Conread position:
               
271-481
               

               
Cow position:
               
chr13:17837806-17838011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr13:61990465-61990198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
243, 23
               

               
Conread position:
               
272-521
               

               
Cow position:
               
chr13:37528097-37527866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
231, 146
               

               
Conread position:
               
272-521
               

               
Cow position:
               
chr13:47022221-47022461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
272-559
               

               
Cow position:
               
chr13:56148377-56148677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 159
               

               
Conread position:
               
272-559
               

               
Cow position:
               
chr13:56160590-56160290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 159
               

               
Conread position:
               
273-495
               

               
Cow position:
               
chr13:15460919-15460699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
192, 168
               

               
Conread position:
               
273-548
               

               
Cow position:
               
chr13:29630717-29630984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
273-559
               

               
Cow position:
               
chr13:8839136-8838854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
273-559
               

               
Cow position:
               
chr13:10929129-10928854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
273-559
               

               
Cow position:
               
chr13:26369379-26369666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
274-437
               

               
Cow position:
               
chr13:40634722-40634892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
274-481
               

               
Cow position:
               
chr13:24110338-24110548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
274-519
               

               
Cow position:
               
chr13:50568548-50568317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
274-553
               

               
Cow position:
               
chr13:46324929-46324651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
276-523
               

               
Cow position:
               
chr13:17110085-17110323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
277-412
               

               
Cow position:
               
chr13:21294936-21295071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr13:13765651-13765900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
277-548
               

               
Cow position:
               
chr13:6389257-6389509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 76
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr13:39367820-39368095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr13:43185019-43184733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr13:52586177-52585884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 283
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr13:8478265-8478430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
278-487
               

               
Cow position:
               
chr13:60651043-60650835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 122
               

               
Conread position:
               
278-508
               

               
Cow position:
               
chr13:3211411-3211640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
157, 141
               

               
Conread position:
               
278-524
               

               
Cow position:
               
chr13:8355067-8355302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr13:8555329-8555603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
237, 7
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr13:8609685-8609411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr13:20180279-20180557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
212, 9
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr13:22887126-22886854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
279-392
               

               
Cow position:
               
chr13:11715528-11715641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 103
               

               
Conread position:
               
279-434
               

               
Cow position:
               
chr13:48465967-48465818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
279-559
               

               
Cow position:
               
chr13:53566464-53566735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
279-562
               

               
Cow position:
               
chr13:62518462-62518190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr13:32826611-32826347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
280-557
               

               
Cow position:
               
chr13:20684267-20683983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
280-559
               

               
Cow position:
               
chr13:52284681-52284949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
234, 8
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr13:8401920-8402168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
281-543
               

               
Cow position:
               
chr13:11820462-11820716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
282-547
               

               
Cow position:
               
chr13:15144498-15144244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
250, 12
               

               
Conread position:
               
282-553
               

               
Cow position:
               
chr13:54344647-54344906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 34
               

               
Conread position:
               
282-557
               

               
Cow position:
               
chr13:56155285-56155019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
269, 80
               

               
Conread position:
               
282-559
               

               
Cow position:
               
chr13:9593372-9593648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
284-544
               

               
Cow position:
               
chr13:45725754-45726021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
284-557
               

               
Cow position:
               
chr13:9644012-9643748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
234, 21
               

               
Conread position:
               
284-559
               

               
Cow position:
               
chr13:43762037-43762309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
284-559
               

               
Cow position:
               
chr13:48037491-48037761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
285-548
               

               
Cow position:
               
chr13:11591620-11591875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr13:11460502-11460761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr13:28683231-28683499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr13:43829113-43829392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 117
               

               
Conread position:
               
286-557
               

               
Cow position:
               
chr13:11060857-11061125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
286-559
               

               
Cow position:
               
chr13:21176449-21176182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
287-559
               

               
Cow position:
               
chr13:23270334-23270073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
233, 96
               

               
Conread position:
               
288-480
               

               
Cow position:
               
chr13:25428351-25428167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
288-543
               

               
Cow position:
               
chr13:37981872-37981622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
230, 75
               

               
Conread position:
               
288-558
               

               
Cow position:
               
chr13:43194041-43194311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 96
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr13:15166690-15166959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr13:15885148-15884877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr13:16343566-16343824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr13:31813747-31814011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr13:37484407-37484134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 188
               

               
Conread position:
               
288-560
               

               
Cow position:
               
chr13:14771324-14771598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
290-559
               

               
Cow position:
               
chr13:17966335-17966069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
293-506
               

               
Cow position:
               
chr13:185407-185618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 127
               

               
Conread position:
               
293-556
               

               
Cow position:
               
chr13:6153906-6153645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
225, 13
               

               
Conread position:
               
294-392
               

               
Cow position:
               
chr13:37984250-37984153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
294-434
               

               
Cow position:
               
chr13:48439668-48439529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
294-478
               

               
Cow position:
               
chr13:18181897-18181714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
294-501
               

               
Cow position:
               
chr13:11397570-11397377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
294-532
               

               
Cow position:
               
chr13:56677893-56678128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr13:12202240-12202505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr13:15110192-15110460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr13:18835082-18835332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr13:46736093-46736353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
241, 133
               

               
Conread position:
               
295-399
               

               
Cow position:
               
chr13:16156346-16156242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-423
               

               
Cow position:
               
chr13:60393663-60393791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-559
               

               
Cow position:
               
chr13:20562872-20563136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
222, 142
               

               
Conread position:
               
296-559
               

               
Cow position:
               
chr13:15902904-15903156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr13:34555947-34555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 92
               

               
Conread position:
               
299-416
               

               
Cow position:
               
chr13:18866609-18866727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:6061125-6060870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:8652559-8652298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 135
               

               
Conread position:
               
300-441
               

               
Cow position:
               
chr13:47634391-47634531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr13:31529761-31529912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
300-555
               

               
Cow position:
               
chr13:890288-890036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
300-559
               

               
Cow position:
               
chr13:17622173-17622421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
301-487
               

               
Cow position:
               
chr13:29123189-29123373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
301-559
               

               
Cow position:
               
chr13:13176535-13176790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr13:11834593-11834334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr13:15529151-15528892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr13:46181678-46181929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
216, 125
               

               
Conread position:
               
303-507
               

               
Cow position:
               
chr13:48862208-48862008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
303-556
               

               
Cow position:
               
chr13:32657913-32657659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
303-559
               

               
Cow position:
               
chr13:14717452-14717197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
305-477
               

               
Cow position:
               
chr13:19183757-19183924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
308-471
               

               
Cow position:
               
chr13:14749516-14749682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
308-559
               

               
Cow position:
               
chr13:8201591-8201346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
309-559
               

               
Cow position:
               
chr13:20650094-20649839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
314-555
               

               
Cow position:
               
chr13:8524720-8524485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
126, 113
               

               
Conread position:
               
314-558
               

               
Cow position:
               
chr13:32535555-32535798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr13:25531892-25531648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr13:46458521-46458762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
315-549
               

               
Cow position:
               
chr13:18243761-18243993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 109
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr13:34761582-34761804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
318-559
               

               
Cow position:
               
chr13:7488443-7488679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
320-551
               

               
Cow position:
               
chr13:62617726-62617955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr13:52929615-52929849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
201, 110
               

               
Conread position:
               
323-559
               

               
Cow position:
               
chr13:11955210-11954970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr13:4463920-4464143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr13:6759881-6759653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr13:17613248-17613486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
325-549
               

               
Cow position:
               
chr13:34941741-34941523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
328-557
               

               
Cow position:
               
chr13:12619204-12618975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
330-558
               

               
Cow position:
               
chr13:61166536-61166319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
188, 34
               

               
Conread position:
               
330-559
               

               
Cow position:
               
chr13:25062327-25062546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
333-559
               

               
Cow position:
               
chr13:60329676-60329890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
335-558
               

               
Cow position:
               
chr13:49507931-49507710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
189, 95
               

               
Conread position:
               
335-559
               

               
Cow position:
               
chr13:13306015-13306238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
335-559
               

               
Cow position:
               
chr13:60340725-60340950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
341-558
               

               
Cow position:
               
chr13:37795383-37795578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
344-546
               

               
Cow position:
               
chr13:41253549-41253749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
344-559
               

               
Cow position:
               
chr13:24376421-24376626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
344-559
               

               
Cow position:
               
chr13:55295698-55295483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
348-560
               

               
Cow position:
               
chr13:6455307-6455509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr13:16024522-16024716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr13:20128600-20128805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
353-557
               

               
Cow position:
               
chr13:10099051-10098853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
357-559
               

               
Cow position:
               
chr13:30693655-30693846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
187, 70
               

               
Conread position:
               
359-478
               

               
Cow position:
               
chr13:33068405-33068288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
359-559
               

               
Cow position:
               
chr13:37521433-37521240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
361-559
               

               
Cow position:
               
chr13:20440636-20440449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
361-559
               

               
Cow position:
               
chr13:33517978-33517784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
362-559
               

               
Cow position:
               
chr13:14870478-14870669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
368-559
               

               
Cow position:
               
chr13:13265759-13265947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
369-559
               

               
Cow position:
               
chr13:28652756-28652939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
370-559
               

               
Cow position:
               
chr13:52922049-52922232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
379-559
               

               
Cow position:
               
chr13:12682583-12682405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
381-559
               

               
Cow position:
               
chr13:47312882-47313059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
388-558
               

               
Cow position:
               
chr13:563172-563004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
389-558
               

               
Cow position:
               
chr13:3701411-3701576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
390-558
               

               
Cow position:
               
chr13:20864042-20863877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
395-555
               

               
Cow position:
               
chr13:6975816-6975657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
395-559
               

               
Cow position:
               
chr13:20041991-20041822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
403-559
               

               
Cow position:
               
chr13:15172427-15172271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
403-559
               

               
Cow position:
               
chr13:21189261-21189417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
413-558
               

               
Cow position:
               
chr13:55843472-55843622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
438-554
               

               
Cow position:
               
chr13:17815787-17815903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
446-559
               

               
Cow position:
               
chr13:21209887-21209998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
450-559
               

               
Cow position:
               
chr13:60393670-60393560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
454-559
               

               
Cow position:
               
chr13:22025674-22025569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
461-558
               

               
Cow position:
               
chr13:14927277-14927374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.