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Cow genome map

           
Conread name:
           
Ss1.1-rski0108_p17.5
        

               
Conread position:
               
86-547
               

               
Cow position:
               
chr14:46685028-46685483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
138-366
               

               
Cow position:
               
chr14:29011270-29011036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 225
               

               
Conread position:
               
139-418
               

               
Cow position:
               
chr14:18559271-18559002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
139-543
               

               
Cow position:
               
chr14:4203309-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 20
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr14:44751251-44751005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
141-556
               

               
Cow position:
               
chr14:19321730-19321312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 175
               

               
Conread position:
               
143-369
               

               
Cow position:
               
chr14:8036118-8036334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
144, 24
               

               
Conread position:
               
146-369
               

               
Cow position:
               
chr14:11916953-11917167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
146-537
               

               
Cow position:
               
chr14:12512099-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 21
               

               
Conread position:
               
146-559
               

               
Cow position:
               
chr14:21963925-21964318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
146-559
               

               
Cow position:
               
chr14:23962646-23963068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
149-493
               

               
Cow position:
               
chr14:16524258-16524603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
151-382
               

               
Cow position:
               
chr14:37933926-37934140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr14:29734566-29734287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
152-556
               

               
Cow position:
               
chr14:11846286-11846692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
153-548
               

               
Cow position:
               
chr14:7479802-7480204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
153-555
               

               
Cow position:
               
chr14:5222491-5222097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
154-338
               

               
Cow position:
               
chr14:5556055-5556237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
154-408
               

               
Cow position:
               
chr14:15211728-15211975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
154-558
               

               
Cow position:
               
chr14:47609798-47609394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr14:16237719-16237312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr14:43045969-43046344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr14:19988264-19988020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
155-517
               

               
Cow position:
               
chr14:30760007-30760372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
155-548
               

               
Cow position:
               
chr14:9019842-9020213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
277, 16
               

               
Conread position:
               
155-558
               

               
Cow position:
               
chr14:26628728-26628326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr14:20736408-20736644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
156-501
               

               
Cow position:
               
chr14:1708862-1708518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
157-493
               

               
Cow position:
               
chr14:12635083-12634756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
157-548
               

               
Cow position:
               
chr14:10609474-10609877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
157-559
               

               
Cow position:
               
chr14:38920752-38921146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
159-559
               

               
Cow position:
               
chr14:42155168-42154767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 134
               

               
Conread position:
               
160-272
               

               
Cow position:
               
chr14:33447704-33447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
161-322
               

               
Cow position:
               
chr14:33462010-33462163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
162-369
               

               
Cow position:
               
chr14:14104167-14104380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
162-443
               

               
Cow position:
               
chr14:7342268-7342538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
163-350
               

               
Cow position:
               
chr14:5044480-5044662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
163-372
               

               
Cow position:
               
chr14:19832588-19832380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
163-476
               

               
Cow position:
               
chr14:19827668-19827357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
224, 40
               

               
Conread position:
               
163-517
               

               
Cow position:
               
chr14:47252433-47252070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
163-521
               

               
Cow position:
               
chr14:40754438-40754086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 38
               

               
Conread position:
               
163-558
               

               
Cow position:
               
chr14:25986315-25986713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr14:10858246-10858629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
164-318
               

               
Cow position:
               
chr14:13961134-13961293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
164-416
               

               
Cow position:
               
chr14:46977798-46977550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr14:38747487-38747860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr14:18301760-18302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
166-388
               

               
Cow position:
               
chr14:31228281-31228064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
166-556
               

               
Cow position:
               
chr14:23090575-23090187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
166-557
               

               
Cow position:
               
chr14:48496343-48495954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
166-559
               

               
Cow position:
               
chr14:13845796-13846184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
166-559
               

               
Cow position:
               
chr14:14327317-14326910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
167-408
               

               
Cow position:
               
chr14:16207680-16207449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
193, 29
               

               
Conread position:
               
167-549
               

               
Cow position:
               
chr14:21357364-21357738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
167-557
               

               
Cow position:
               
chr14:35381393-35381785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
167-558
               

               
Cow position:
               
chr14:13385170-13385566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 150
               

               
Conread position:
               
168-479
               

               
Cow position:
               
chr14:48899979-48900289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr14:38144300-38143915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr14:41472168-41471771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr14:50683219-50683067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
172-414
               

               
Cow position:
               
chr14:36559412-36559171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr14:27330545-27330801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
172-559
               

               
Cow position:
               
chr14:23682076-23682458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
173-285
               

               
Cow position:
               
chr14:19644300-19644413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr14:16593190-16593372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
173-352
               

               
Cow position:
               
chr14:16770054-16769872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
173-355
               

               
Cow position:
               
chr14:39097318-39097504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr14:42578929-42578731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
173-368
               

               
Cow position:
               
chr14:16344331-16344137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
173-384
               

               
Cow position:
               
chr14:145699-145486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
173-393
               

               
Cow position:
               
chr14:3125873-3125665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
173-442
               

               
Cow position:
               
chr14:28694907-28694632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
173-484
               

               
Cow position:
               
chr14:41486457-41486138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr14:8946270-8945884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr14:17899292-17899686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
174-376
               

               
Cow position:
               
chr14:18375407-18375618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr14:33546546-33546256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
175-381
               

               
Cow position:
               
chr14:23237849-23237648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr14:41623142-41623347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
175-396
               

               
Cow position:
               
chr14:7316604-7316833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
175-492
               

               
Cow position:
               
chr14:1868977-1868668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr14:47170534-47170220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 27
               

               
Conread position:
               
175-512
               

               
Cow position:
               
chr14:7036546-7036205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 259
               

               
Conread position:
               
175-556
               

               
Cow position:
               
chr14:109665-109314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr14:14949398-14949013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr14:19851218-19850832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr14:37679171-37678805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr14:45677047-45677420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
176-285
               

               
Cow position:
               
chr14:30050134-30050023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr14:8591030-8590840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr14:31893404-31893590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr14:33618123-33618317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr14:20915163-20914960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
176-382
               

               
Cow position:
               
chr14:11472414-11472205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
176-487
               

               
Cow position:
               
chr14:15504344-15504029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
176-491
               

               
Cow position:
               
chr14:7621320-7621000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
176-549
               

               
Cow position:
               
chr14:14417686-14417310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
176-557
               

               
Cow position:
               
chr14:33774211-33773859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr14:20667190-20666827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
176-560
               

               
Cow position:
               
chr14:4877412-4877033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chr14:49555380-49555220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
177-355
               

               
Cow position:
               
chr14:12071711-12071528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
177-369
               

               
Cow position:
               
chr14:3923732-3923918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr14:37152118-37151923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr14:6360211-6360425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr14:38458419-38458634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
177-424
               

               
Cow position:
               
chr14:23078975-23078726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
177-424
               

               
Cow position:
               
chr14:24527349-24527097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
177-425
               

               
Cow position:
               
chr14:37106418-37106668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
177-426
               

               
Cow position:
               
chr14:19487132-19487362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
177-431
               

               
Cow position:
               
chr14:27999225-27998964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 231
               

               
Conread position:
               
177-435
               

               
Cow position:
               
chr14:12924119-12924378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
177-440
               

               
Cow position:
               
chr14:13928398-13928653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr14:25398891-25399179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr14:12146666-12146372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 251
               

               
Conread position:
               
177-543
               

               
Cow position:
               
chr14:47584844-47584472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
177-556
               

               
Cow position:
               
chr14:12667544-12667926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr14:8786720-8786354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 102
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr14:13042575-13042955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr14:26442528-26442145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr14:34200042-34199647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 264
               

               
Conread position:
               
178-351
               

               
Cow position:
               
chr14:12137835-12138009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr14:24880776-24880603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
178-365
               

               
Cow position:
               
chr14:9030103-9030287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr14:27303474-27303675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
178-380
               

               
Cow position:
               
chr14:20010695-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr14:4481494-4481694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr14:5668302-5668095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
178-390
               

               
Cow position:
               
chr14:18270175-18270392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
178-399
               

               
Cow position:
               
chr14:24785476-24785698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr14:35651960-35651741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
178-441
               

               
Cow position:
               
chr14:38286168-38285889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 241
               

               
Conread position:
               
178-447
               

               
Cow position:
               
chr14:20482035-20481756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
178-487
               

               
Cow position:
               
chr14:44558000-44557686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
178-512
               

               
Cow position:
               
chr14:5025095-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 245
               

               
Conread position:
               
178-530
               

               
Cow position:
               
chr14:15944851-15944501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
178-556
               

               
Cow position:
               
chr14:27338156-27338538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 229
               

               
Conread position:
               
178-557
               

               
Cow position:
               
chr14:38168522-38168876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr14:8848095-8848442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
179-280
               

               
Cow position:
               
chr14:15258786-15258884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr14:9510362-9510598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
179-431
               

               
Cow position:
               
chr14:18941468-18941214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
179-449
               

               
Cow position:
               
chr14:10851847-10852119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
179-473
               

               
Cow position:
               
chr14:25225552-25225842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
179-507
               

               
Cow position:
               
chr14:28153928-28153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
179-536
               

               
Cow position:
               
chr14:15931690-15932050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 147
               

               
Conread position:
               
179-544
               

               
Cow position:
               
chr14:33457227-33456858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr14:17755396-17755760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr14:24416716-24417081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr14:28304969-28304592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
180-323
               

               
Cow position:
               
chr14:30024843-30024983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
180-365
               

               
Cow position:
               
chr14:24746276-24746473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
180-392
               

               
Cow position:
               
chr14:47224550-47224333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
180-443
               

               
Cow position:
               
chr14:43868126-43868394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 162
               

               
Conread position:
               
180-445
               

               
Cow position:
               
chr14:28465402-28465135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 218
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr14:36443195-36442896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
180-517
               

               
Cow position:
               
chr14:23442847-23443173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
180-558
               

               
Cow position:
               
chr14:13809773-13810134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr14:20640809-20640430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 198
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr14:20712863-20712490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr14:23761712-23762076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
282, 27
               

               
Conread position:
               
181-354
               

               
Cow position:
               
chr14:6389063-6388887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
181-371
               

               
Cow position:
               
chr14:33758187-33758382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
181-425
               

               
Cow position:
               
chr14:45312618-45312858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
181-443
               

               
Cow position:
               
chr14:10937490-10937765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
181-487
               

               
Cow position:
               
chr14:48745547-48745268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
181-493
               

               
Cow position:
               
chr14:40474384-40474692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
181-521
               

               
Cow position:
               
chr14:22941918-22941563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr14:20016891-20016510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 254
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr14:1803296-1802918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr14:26859919-26859527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 250
               

               
Conread position:
               
182-369
               

               
Cow position:
               
chr14:11981284-11981477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
182-377
               

               
Cow position:
               
chr14:29282575-29282773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
182-398
               

               
Cow position:
               
chr14:41156898-41156685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
182-414
               

               
Cow position:
               
chr14:37446854-37446616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
182-415
               

               
Cow position:
               
chr14:20245346-20245113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-416
               

               
Cow position:
               
chr14:1431993-1431775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr14:4047566-4047866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 253
               

               
Conread position:
               
182-504
               

               
Cow position:
               
chr14:7636679-7636356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr14:33341576-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 29
               

               
Conread position:
               
182-555
               

               
Cow position:
               
chr14:14466639-14466285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr14:20826313-20826672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
183-303
               

               
Cow position:
               
chr14:38411128-38411246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
183-352
               

               
Cow position:
               
chr14:13516170-13515996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
183-369
               

               
Cow position:
               
chr14:11831976-11831778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr14:8949477-8949693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr14:49940833-49941074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 105
               

               
Conread position:
               
183-434
               

               
Cow position:
               
chr14:13731274-13731023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
183-450
               

               
Cow position:
               
chr14:6898893-6899162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 209
               

               
Conread position:
               
183-466
               

               
Cow position:
               
chr14:29809113-29809403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
183-518
               

               
Cow position:
               
chr14:12244561-12244226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
183-555
               

               
Cow position:
               
chr14:48492978-48492594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
183-556
               

               
Cow position:
               
chr14:34083324-34082960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
183-558
               

               
Cow position:
               
chr14:20932447-20932811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
335, 20
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr14:24921919-24922300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr14:31130555-31130186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr14:33751361-33751719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr14:36254870-36254510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr14:36289964-36289603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
184-370
               

               
Cow position:
               
chr14:40212093-40212264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
184-376
               

               
Cow position:
               
chr14:18412771-18412574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
184-381
               

               
Cow position:
               
chr14:7271433-7271228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
184-385
               

               
Cow position:
               
chr14:8083016-8083224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
184-387
               

               
Cow position:
               
chr14:27652983-27653192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr14:48829912-48829710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr14:12546731-12546507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr14:4848177-4848412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr14:31177456-31177209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
184-479
               

               
Cow position:
               
chr14:29964843-29965134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
184-514
               

               
Cow position:
               
chr14:11470328-11469996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
184-521
               

               
Cow position:
               
chr14:27823254-27823591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
184-530
               

               
Cow position:
               
chr14:48772741-48773072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
184-536
               

               
Cow position:
               
chr14:25979095-25979441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
184-544
               

               
Cow position:
               
chr14:50589566-50589201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr14:39770397-39770036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr14:47673056-47672688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
185-355
               

               
Cow position:
               
chr14:45955112-45955287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
185-364
               

               
Cow position:
               
chr14:19633071-19633233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:7357844-7358047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr14:25284823-25285030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr14:36151150-36151365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr14:30023376-30023151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chr14:20984158-20984403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
185-460
               

               
Cow position:
               
chr14:7198320-7198600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr14:23104171-23103880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 100
               

               
Conread position:
               
185-481
               

               
Cow position:
               
chr14:49713803-49714098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
185-487
               

               
Cow position:
               
chr14:12073130-12072825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
185-556
               

               
Cow position:
               
chr14:48447338-48446969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:8541382-8541013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
306, 86
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:16256600-16256963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:19618914-19618555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:24607790-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:27919910-27919540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
118, 153
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr14:32452080-32452450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 18
               

               
Conread position:
               
186-324
               

               
Cow position:
               
chr14:7782003-7781863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
186-331
               

               
Cow position:
               
chr14:24757644-24757799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
186-350
               

               
Cow position:
               
chr14:21968682-21968518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-384
               

               
Cow position:
               
chr14:10920743-10920538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
186-387
               

               
Cow position:
               
chr14:25290635-25290837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
186-418
               

               
Cow position:
               
chr14:11576896-11577127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
186-426
               

               
Cow position:
               
chr14:41267897-41267668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
186-478
               

               
Cow position:
               
chr14:3498636-3498922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
186-517
               

               
Cow position:
               
chr14:41809831-41809501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
186-557
               

               
Cow position:
               
chr14:18345898-18345539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr14:37103032-37103407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
186-560
               

               
Cow position:
               
chr14:15997927-15997569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
187-425
               

               
Cow position:
               
chr14:12033419-12033175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
187-489
               

               
Cow position:
               
chr14:38550654-38550356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
110, 134
               

               
Conread position:
               
187-556
               

               
Cow position:
               
chr14:7799744-7800107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr14:28987517-28987889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
188-350
               

               
Cow position:
               
chr14:2852978-2853141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
188-372
               

               
Cow position:
               
chr14:4491266-4491449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
188-382
               

               
Cow position:
               
chr14:11079282-11079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
188-399
               

               
Cow position:
               
chr14:4860328-4860542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr14:39918906-39918566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
189-359
               

               
Cow position:
               
chr14:11604714-11604882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
189-364
               

               
Cow position:
               
chr14:31342039-31342217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
189-366
               

               
Cow position:
               
chr14:42546732-42546546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
189-368
               

               
Cow position:
               
chr14:21593173-21592994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
189-369
               

               
Cow position:
               
chr14:40107283-40107105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 122
               

               
Conread position:
               
189-372
               

               
Cow position:
               
chr14:44713243-44713432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
189-376
               

               
Cow position:
               
chr14:35421258-35421065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr14:8027738-8027527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
189-408
               

               
Cow position:
               
chr14:16287313-16287531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
189-416
               

               
Cow position:
               
chr14:15470157-15469925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 117
               

               
Conread position:
               
189-423
               

               
Cow position:
               
chr14:22916466-22916227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
189-425
               

               
Cow position:
               
chr14:36425576-36425345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
189-426
               

               
Cow position:
               
chr14:21535474-21535240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
189-434
               

               
Cow position:
               
chr14:28923991-28924243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
189-452
               

               
Cow position:
               
chr14:15428307-15428572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
189-476
               

               
Cow position:
               
chr14:29723750-29723479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
189-490
               

               
Cow position:
               
chr14:12081297-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
189-490
               

               
Cow position:
               
chr14:19193290-19193601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
189-512
               

               
Cow position:
               
chr14:11056903-11056590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
189-517
               

               
Cow position:
               
chr14:23424094-23424412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 75
               

               
Conread position:
               
189-543
               

               
Cow position:
               
chr14:48741038-48740690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
189-544
               

               
Cow position:
               
chr14:18309472-18309117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
189-544
               

               
Cow position:
               
chr14:20010482-20010127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
189-547
               

               
Cow position:
               
chr14:46973270-46973622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
189-548
               

               
Cow position:
               
chr14:38378833-38379207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
189-548
               

               
Cow position:
               
chr14:40329266-40329630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
189-553
               

               
Cow position:
               
chr14:48838417-48838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 256
               

               
Conread position:
               
189-556
               

               
Cow position:
               
chr14:7290626-7290986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
189-557
               

               
Cow position:
               
chr14:1715558-1715927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr14:5235050-5234686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr14:5835759-5836097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr14:17554664-17554295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr14:26115887-26116257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:2959354-2959708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:6600125-6599754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:11043667-11043296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:12343015-12342622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:18485428-18485047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:20110895-20110526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 251
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:35420934-35420564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:39037066-39037433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:40230807-40230441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr14:41966054-41966437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 296
               

               
Conread position:
               
190-335
               

               
Cow position:
               
chr14:10693762-10693620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
190-355
               

               
Cow position:
               
chr14:39996440-39996606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
190-360
               

               
Cow position:
               
chr14:27364406-27364581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
190-418
               

               
Cow position:
               
chr14:40191430-40191644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
190-431
               

               
Cow position:
               
chr14:21371956-21371708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr14:11285397-11285717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
190-508
               

               
Cow position:
               
chr14:6541898-6541578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 245
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr14:20954514-20954839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
190-521
               

               
Cow position:
               
chr14:26655305-26654974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
190-542
               

               
Cow position:
               
chr14:25681754-25682111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr14:14979873-14979506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr14:41210693-41211050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
191-424
               

               
Cow position:
               
chr14:9307897-9308130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
191-484
               

               
Cow position:
               
chr14:10693428-10693137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr14:23465220-23465026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr14:33328796-33328988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr14:606817-606593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
192-557
               

               
Cow position:
               
chr14:10078086-10078462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 252
               

               
Conread position:
               
193-367
               

               
Cow position:
               
chr14:49501176-49500998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
193-385
               

               
Cow position:
               
chr14:20070896-20071097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
193-435
               

               
Cow position:
               
chr14:42513584-42513355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 21
               

               
Conread position:
               
193-477
               

               
Cow position:
               
chr14:49807008-49807284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
193-492
               

               
Cow position:
               
chr14:16352191-16352475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
193-559
               

               
Cow position:
               
chr14:4227393-4227009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
193-559
               

               
Cow position:
               
chr14:24236655-24237022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 249
               

               
Conread position:
               
194-318
               

               
Cow position:
               
chr14:45549267-45549145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
194-370
               

               
Cow position:
               
chr14:24845814-24845978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr14:20483870-20483670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
194-493
               

               
Cow position:
               
chr14:13582921-13582620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 239
               

               
Conread position:
               
194-548
               

               
Cow position:
               
chr14:15313390-15313740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 216
               

               
Conread position:
               
194-559
               

               
Cow position:
               
chr14:28378190-28378565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
195-559
               

               
Cow position:
               
chr14:15518571-15518184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 235
               

               
Conread position:
               
196-388
               

               
Cow position:
               
chr14:40347805-40347617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr14:21557189-21556980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
196-426
               

               
Cow position:
               
chr14:5959156-5958920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
196-502
               

               
Cow position:
               
chr14:40208742-40209040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
196-517
               

               
Cow position:
               
chr14:26222572-26222899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr14:6736031-6735663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr14:33247585-33247236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr14:49824778-49824429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr14:445134-445293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-430
               

               
Cow position:
               
chr14:25919686-25919924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
197-435
               

               
Cow position:
               
chr14:8688678-8688426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 91
               

               
Conread position:
               
197-476
               

               
Cow position:
               
chr14:49487801-49488072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
202, 57
               

               
Conread position:
               
197-510
               

               
Cow position:
               
chr14:41303006-41302684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 236
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr14:33714837-33714486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 133
               

               
Conread position:
               
198-326
               

               
Cow position:
               
chr14:21284491-21284619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-362
               

               
Cow position:
               
chr14:37504350-37504518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr14:40806760-40806605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
198-372
               

               
Cow position:
               
chr14:49817848-49817672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
198-375
               

               
Cow position:
               
chr14:2712168-2712007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr14:27847194-27847367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr14:49563935-49563763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr14:50519339-50519152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr14:8707395-8707589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
198-435
               

               
Cow position:
               
chr14:8923749-8923507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
198-484
               

               
Cow position:
               
chr14:39414994-39415280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 232
               

               
Conread position:
               
198-487
               

               
Cow position:
               
chr14:27504400-27504106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
198-497
               

               
Cow position:
               
chr14:21224481-21224778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 110
               

               
Conread position:
               
198-512
               

               
Cow position:
               
chr14:41253141-41252839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
245, 98
               

               
Conread position:
               
198-522
               

               
Cow position:
               
chr14:37422935-37422627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
316, 75
               

               
Conread position:
               
198-548
               

               
Cow position:
               
chr14:21933506-21933155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
198-557
               

               
Cow position:
               
chr14:24387289-24387643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr14:14622330-14621977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 72
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr14:36437651-36437290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 230
               

               
Conread position:
               
199-371
               

               
Cow position:
               
chr14:10721863-10721695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr14:12954536-12954226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
258, 69
               

               
Conread position:
               
199-558
               

               
Cow position:
               
chr14:38355047-38355381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
321, 59
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr14:2975247-2974898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 135
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr14:8101636-8101986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr14:26108491-26108830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
224, 57
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr14:28115351-28114989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr14:41749918-41749561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
200-355
               

               
Cow position:
               
chr14:19355132-19355283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr14:25912494-25912660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
200-544
               

               
Cow position:
               
chr14:44084636-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
201-369
               

               
Cow position:
               
chr14:15228386-15228550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr14:21530242-21530053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 172
               

               
Conread position:
               
201-425
               

               
Cow position:
               
chr14:20466776-20466996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
201-427
               

               
Cow position:
               
chr14:10706719-10706944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 98
               

               
Conread position:
               
201-546
               

               
Cow position:
               
chr14:14182192-14182529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
202-465
               

               
Cow position:
               
chr14:41838017-41837769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
202-521
               

               
Cow position:
               
chr14:35503205-35503523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr14:39434413-39434063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
202-560
               

               
Cow position:
               
chr14:3194715-3195046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
203-369
               

               
Cow position:
               
chr14:4838415-4838257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
203-370
               

               
Cow position:
               
chr14:40952105-40952282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
203-374
               

               
Cow position:
               
chr14:32784275-32784100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
203-399
               

               
Cow position:
               
chr14:7127703-7127898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
203-415
               

               
Cow position:
               
chr14:36775506-36775706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
202, 64
               

               
Conread position:
               
203-416
               

               
Cow position:
               
chr14:23419636-23419855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
203-423
               

               
Cow position:
               
chr14:24712791-24712560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
203-424
               

               
Cow position:
               
chr14:16749849-16749620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
203-425
               

               
Cow position:
               
chr14:12142073-12141839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
203-427
               

               
Cow position:
               
chr14:11729264-11729041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
203-465
               

               
Cow position:
               
chr14:11643403-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
203-544
               

               
Cow position:
               
chr14:45045439-45045788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
203-557
               

               
Cow position:
               
chr14:33791036-33791381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
203-558
               

               
Cow position:
               
chr14:38529822-38530162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
321, 55
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:21691414-21691076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
226, 65
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:22988878-22989229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:36166783-36167135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:42330189-42330548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 227
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:45052281-45052640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 204
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr14:50362635-50362995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
204-434
               

               
Cow position:
               
chr14:48744359-48744588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
204-439
               

               
Cow position:
               
chr14:27733452-27733681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
204-487
               

               
Cow position:
               
chr14:2038942-2038690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
204-548
               

               
Cow position:
               
chr14:42596238-42596566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr14:12324251-12324622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr14:36555286-36554958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
313, 58
               

               
Conread position:
               
205-442
               

               
Cow position:
               
chr14:12884109-12884346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 185
               

               
Conread position:
               
205-487
               

               
Cow position:
               
chr14:4282665-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
205-558
               

               
Cow position:
               
chr14:30606072-30605723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr14:19188898-19189233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr14:22231062-22230901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
206-548
               

               
Cow position:
               
chr14:24981299-24981643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr14:18112744-18112571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
207-481
               

               
Cow position:
               
chr14:1796044-1796309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
207-483
               

               
Cow position:
               
chr14:24945647-24945370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
207-522
               

               
Cow position:
               
chr14:25903379-25903687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 228
               

               
Conread position:
               
207-544
               

               
Cow position:
               
chr14:5630015-5630343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
207-553
               

               
Cow position:
               
chr14:16550147-16549813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr14:11615356-11615025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
210, 57
               

               
Conread position:
               
207-564
               

               
Cow position:
               
chr14:15492438-15492798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
208-419
               

               
Cow position:
               
chr14:11567261-11567465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
208-548
               

               
Cow position:
               
chr14:23080906-23080579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
208-558
               

               
Cow position:
               
chr14:29592868-29592527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
208-559
               

               
Cow position:
               
chr14:48426920-48427270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
209-371
               

               
Cow position:
               
chr14:42153553-42153392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
209-416
               

               
Cow position:
               
chr14:34140343-34140136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
92, 174
               

               
Conread position:
               
209-482
               

               
Cow position:
               
chr14:25227996-25228261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
261, 46
               

               
Conread position:
               
209-520
               

               
Cow position:
               
chr14:30756690-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
209-522
               

               
Cow position:
               
chr14:26796951-26796614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
209-548
               

               
Cow position:
               
chr14:19594286-19593950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
216, 79
               

               
Conread position:
               
209-548
               

               
Cow position:
               
chr14:25001881-25002220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 227
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr14:2759283-2759109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
211-487
               

               
Cow position:
               
chr14:7695115-7695392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
211-548
               

               
Cow position:
               
chr14:7959649-7959957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
231, 62
               

               
Conread position:
               
213-555
               

               
Cow position:
               
chr14:48689381-48689719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
215-425
               

               
Cow position:
               
chr14:25381295-25381490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
215-490
               

               
Cow position:
               
chr14:12127542-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
215-559
               

               
Cow position:
               
chr14:27848034-27848395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr14:19772418-19772264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr14:20035574-20035734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
216-372
               

               
Cow position:
               
chr14:20513083-20513243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
216-377
               

               
Cow position:
               
chr14:11280257-11280095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
216-416
               

               
Cow position:
               
chr14:49916534-49916727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
216-421
               

               
Cow position:
               
chr14:18351011-18350795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
216-469
               

               
Cow position:
               
chr14:37901856-37902107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr14:16760255-16760585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 197
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr14:26433393-26433047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 229
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr14:38674073-38673891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
217-559
               

               
Cow position:
               
chr14:40165286-40165616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
218-558
               

               
Cow position:
               
chr14:12520446-12520112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 204
               

               
Conread position:
               
218-559
               

               
Cow position:
               
chr14:23712553-23712884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
219-396
               

               
Cow position:
               
chr14:41191239-41191058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
219-559
               

               
Cow position:
               
chr14:1646325-1645995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
220-558
               

               
Cow position:
               
chr14:18904728-18904415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
298, 47
               

               
Conread position:
               
224-399
               

               
Cow position:
               
chr14:3173862-3173697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
228-435
               

               
Cow position:
               
chr14:2541231-2541024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
229-519
               

               
Cow position:
               
chr14:33300563-33300862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr14:16032882-16033194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr14:27076843-27077165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 264
               

               
Conread position:
               
237-558
               

               
Cow position:
               
chr14:27305026-27305349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
240-544
               

               
Cow position:
               
chr14:37447588-37447287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
240-548
               

               
Cow position:
               
chr14:41127786-41128079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
278, 48
               

               
Conread position:
               
241-559
               

               
Cow position:
               
chr14:41479782-41479463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
243-368
               

               
Cow position:
               
chr14:21538553-21538427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
248-559
               

               
Cow position:
               
chr14:43249479-43249779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 7
               

               
Conread position:
               
249-559
               

               
Cow position:
               
chr14:4990889-4991192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
251-559
               

               
Cow position:
               
chr14:39618484-39618178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 200
               

               
Conread position:
               
252-558
               

               
Cow position:
               
chr14:33830194-33830493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
255-408
               

               
Cow position:
               
chr14:15491047-15491205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
255-559
               

               
Cow position:
               
chr14:6175497-6175777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
262, 30
               

               
Conread position:
               
257-554
               

               
Cow position:
               
chr14:40283517-40283812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
258-392
               

               
Cow position:
               
chr14:28706943-28707080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
262-495
               

               
Cow position:
               
chr14:34096666-34096430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
262-517
               

               
Cow position:
               
chr14:32553401-32553155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
263-559
               

               
Cow position:
               
chr14:45605000-45605288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
264-425
               

               
Cow position:
               
chr14:24913780-24913942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
265-493
               

               
Cow position:
               
chr14:17809844-17810080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
265-559
               

               
Cow position:
               
chr14:15055087-15054792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
266-537
               

               
Cow position:
               
chr14:49021990-49021727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
250, 28
               

               
Conread position:
               
266-544
               

               
Cow position:
               
chr14:1859705-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
266-545
               

               
Cow position:
               
chr14:46654635-46654362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
268-388
               

               
Cow position:
               
chr14:16761701-16761581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
269-378
               

               
Cow position:
               
chr14:9029739-9029628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
269-389
               

               
Cow position:
               
chr14:29631844-29631961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
269-399
               

               
Cow position:
               
chr14:23663493-23663368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
269-399
               

               
Cow position:
               
chr14:42276536-42276663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
269-437
               

               
Cow position:
               
chr14:26148805-26148636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
269-442
               

               
Cow position:
               
chr14:45577182-45577009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-469
               

               
Cow position:
               
chr14:16457430-16457631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
149, 88
               

               
Conread position:
               
269-472
               

               
Cow position:
               
chr14:803598-803797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
269-475
               

               
Cow position:
               
chr14:5557210-5557006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
269-490
               

               
Cow position:
               
chr14:2833495-2833274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
189, 168
               

               
Conread position:
               
269-507
               

               
Cow position:
               
chr14:18763522-18763300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
269-511
               

               
Cow position:
               
chr14:42436935-42437174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
269-543
               

               
Cow position:
               
chr14:18657693-18657422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
269-544
               

               
Cow position:
               
chr14:10631208-10630943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
251, 38
               

               
Conread position:
               
269-544
               

               
Cow position:
               
chr14:37884006-37883733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
176, 158
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:8749987-8750272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 79
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:19129416-19129705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 160
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:22583061-22583338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:26097783-26097493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
249, 160
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:32371831-32371549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr14:39926120-39926392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
270-521
               

               
Cow position:
               
chr14:19951477-19951728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
270-541
               

               
Cow position:
               
chr14:12035322-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
248, 23
               

               
Conread position:
               
270-548
               

               
Cow position:
               
chr14:20600298-20600570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr14:9901095-9901368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr14:19394274-19394557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
248, 75
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr14:26490833-26490546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 155
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr14:37131573-37131852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr14:38338222-38337950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
271-385
               

               
Cow position:
               
chr14:23719410-23719297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr14:28003881-28004174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr14:28795584-28795870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
169, 153
               

               
Conread position:
               
272-492
               

               
Cow position:
               
chr14:34331413-34331197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
272-555
               

               
Cow position:
               
chr14:44257837-44258117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
273-512
               

               
Cow position:
               
chr14:19359801-19360044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
23, 203
               

               
Conread position:
               
274-427
               

               
Cow position:
               
chr14:25333973-25334129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
276-559
               

               
Cow position:
               
chr14:37884494-37884217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
277-425
               

               
Cow position:
               
chr14:11975814-11975670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
277-432
               

               
Cow position:
               
chr14:20349814-20349657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr14:1978153-1977885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr14:25779019-25779288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
278-419
               

               
Cow position:
               
chr14:42339091-42339225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
278-434
               

               
Cow position:
               
chr14:34449052-34448896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-440
               

               
Cow position:
               
chr14:34399879-34399718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
278-521
               

               
Cow position:
               
chr14:14316806-14317040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
278-549
               

               
Cow position:
               
chr14:9837973-9837706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr14:9308150-9308421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
279-416
               

               
Cow position:
               
chr14:2981750-2981614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
279-559
               

               
Cow position:
               
chr14:4109570-4109279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 190
               

               
Conread position:
               
282-459
               

               
Cow position:
               
chr14:3779258-3779435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
282-559
               

               
Cow position:
               
chr14:27592033-27591757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 65
               

               
Conread position:
               
282-559
               

               
Cow position:
               
chr14:29632957-29632689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
283-425
               

               
Cow position:
               
chr14:2571099-2570959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
284-505
               

               
Cow position:
               
chr14:23478752-23478963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
211, 73
               

               
Conread position:
               
284-521
               

               
Cow position:
               
chr14:27275088-27275320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr14:46997964-46998212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
284-547
               

               
Cow position:
               
chr14:19863509-19863245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
284-554
               

               
Cow position:
               
chr14:19372264-19372533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
284-559
               

               
Cow position:
               
chr14:34983792-34984058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
285-374
               

               
Cow position:
               
chr14:29239079-29239169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
285-392
               

               
Cow position:
               
chr14:24580567-24580673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
285-543
               

               
Cow position:
               
chr14:14187257-14187516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
286-395
               

               
Cow position:
               
chr14:40018216-40018320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
286-444
               

               
Cow position:
               
chr14:5355098-5354944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
287-558
               

               
Cow position:
               
chr14:10702910-10702637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
288-469
               

               
Cow position:
               
chr14:19959805-19959628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
288-494
               

               
Cow position:
               
chr14:15039684-15039477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
184, 106
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr14:16834251-16834532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr14:17841362-17841092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr14:24796505-24796230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr14:47027442-47027174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
289-413
               

               
Cow position:
               
chr14:40287522-40287646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
289-554
               

               
Cow position:
               
chr14:33309573-33309319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
229, 131
               

               
Conread position:
               
289-557
               

               
Cow position:
               
chr14:40432855-40433114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
290-557
               

               
Cow position:
               
chr14:35018822-35018560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
291-554
               

               
Cow position:
               
chr14:39778684-39778942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 128
               

               
Conread position:
               
291-559
               

               
Cow position:
               
chr14:48412950-48412683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
293-512
               

               
Cow position:
               
chr14:29698427-29698208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr14:39775115-39774857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
295-559
               

               
Cow position:
               
chr14:20385049-20384789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
208, 124
               

               
Conread position:
               
295-559
               

               
Cow position:
               
chr14:36709060-36709317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 79
               

               
Conread position:
               
297-559
               

               
Cow position:
               
chr14:33338537-33338283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
299-432
               

               
Cow position:
               
chr14:33643900-33644030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr14:25403995-25403749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr14:27791483-27791724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr14:35544564-35544321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
300-559
               

               
Cow position:
               
chr14:8784142-8784379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
300-559
               

               
Cow position:
               
chr14:40033936-40034170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
302-548
               

               
Cow position:
               
chr14:41180771-41180512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
302-558
               

               
Cow position:
               
chr14:34125240-34124983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
303-549
               

               
Cow position:
               
chr14:7582505-7582264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
303-557
               

               
Cow position:
               
chr14:23107267-23107524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 110
               

               
Conread position:
               
303-560
               

               
Cow position:
               
chr14:22459914-22459678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
304-559
               

               
Cow position:
               
chr14:12856545-12856794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
306-511
               

               
Cow position:
               
chr14:5633998-5633789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
307-559
               

               
Cow position:
               
chr14:25378546-25378297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
309-469
               

               
Cow position:
               
chr14:42480267-42480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
310-496
               

               
Cow position:
               
chr14:32018060-32018245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
178, 119
               

               
Conread position:
               
313-545
               

               
Cow position:
               
chr14:22966710-22966936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
207, 11
               

               
Conread position:
               
317-559
               

               
Cow position:
               
chr14:18449050-18448811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
319-549
               

               
Cow position:
               
chr14:26191144-26190912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
320-469
               

               
Cow position:
               
chr14:19939086-19939233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr14:3564245-3564472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr14:29029790-29030028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr14:41325486-41325243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 215
               

               
Conread position:
               
323-469
               

               
Cow position:
               
chr14:2345031-2345176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr14:3162692-3162906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
330-544
               

               
Cow position:
               
chr14:33643806-33643600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
331-559
               

               
Cow position:
               
chr14:34221031-34221252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
177, 25
               

               
Conread position:
               
333-557
               

               
Cow position:
               
chr14:47591939-47591723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
334-559
               

               
Cow position:
               
chr14:25231675-25231451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 217
               

               
Conread position:
               
341-529
               

               
Cow position:
               
chr14:17830894-17831078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
346-469
               

               
Cow position:
               
chr14:15260796-15260918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
350-548
               

               
Cow position:
               
chr14:33538945-33538734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
360-559
               

               
Cow position:
               
chr14:33828163-33828355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
364-555
               

               
Cow position:
               
chr14:33462171-33462351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
374-559
               

               
Cow position:
               
chr14:14580884-14581063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
379-559
               

               
Cow position:
               
chr14:8964568-8964737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
379-559
               

               
Cow position:
               
chr14:11820100-11819926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
385-558
               

               
Cow position:
               
chr14:49280349-49280177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
398-559
               

               
Cow position:
               
chr14:27312462-27312623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 101
               

               
Conread position:
               
411-559
               

               
Cow position:
               
chr14:15514061-15514213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
429-558
               

               
Cow position:
               
chr14:19633247-19633375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
458-559
               

               
Cow position:
               
chr14:37640331-37640432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.