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Cow genome map

           
Conread name:
           
Ss1.1-rski0108_p17.5
        

               
Conread position:
               
16-179
               

               
Cow position:
               
chr22:9129405-9129561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
122-558
               

               
Cow position:
               
chr22:11601311-11600881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
124-402
               

               
Cow position:
               
chr22:36209531-36209248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
134-417
               

               
Cow position:
               
chr22:45104003-45104286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
134-559
               

               
Cow position:
               
chr22:8412786-8412370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 23
               

               
Conread position:
               
142-559
               

               
Cow position:
               
chr22:1485122-1484704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
146-395
               

               
Cow position:
               
chr22:7518807-7518558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
146-415
               

               
Cow position:
               
chr22:26268103-26267833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
146-559
               

               
Cow position:
               
chr22:3325840-3325427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
238, 221
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr22:40120622-40121036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr22:10351214-10350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
149-559
               

               
Cow position:
               
chr22:18926615-18926197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
150-432
               

               
Cow position:
               
chr22:16235255-16235539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
150-557
               

               
Cow position:
               
chr22:16291689-16292073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr22:29954764-29955155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
151-483
               

               
Cow position:
               
chr22:21397663-21397987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
151-517
               

               
Cow position:
               
chr22:14090970-14091337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
152-469
               

               
Cow position:
               
chr22:22266571-22266242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
152-538
               

               
Cow position:
               
chr22:17193638-17193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
153-517
               

               
Cow position:
               
chr22:2123537-2123179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 126
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr22:16866283-16866047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
154-419
               

               
Cow position:
               
chr22:30253466-30253179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr22:11613673-11613266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 254
               

               
Conread position:
               
155-521
               

               
Cow position:
               
chr22:43237158-43237527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr22:16346636-16346406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
156-556
               

               
Cow position:
               
chr22:16273891-16273479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
156-559
               

               
Cow position:
               
chr22:39696539-39696133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
157-556
               

               
Cow position:
               
chr22:16053555-16053153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 267
               

               
Conread position:
               
157-559
               

               
Cow position:
               
chr22:19047592-19047977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr22:10966372-10966186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
158-425
               

               
Cow position:
               
chr22:27944335-27944051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
158-430
               

               
Cow position:
               
chr22:31195296-31195022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
158-480
               

               
Cow position:
               
chr22:28340431-28340113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr22:32661752-32661349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
159-383
               

               
Cow position:
               
chr22:9735503-9735284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
160-384
               

               
Cow position:
               
chr22:11221410-11221201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
196, 38
               

               
Conread position:
               
160-385
               

               
Cow position:
               
chr22:10468749-10468524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
160-488
               

               
Cow position:
               
chr22:17359711-17359391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
160-559
               

               
Cow position:
               
chr22:1975858-1975454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
160-559
               

               
Cow position:
               
chr22:31196258-31196658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
161-350
               

               
Cow position:
               
chr22:12586757-12586576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
161-544
               

               
Cow position:
               
chr22:11766803-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 268
               

               
Conread position:
               
161-547
               

               
Cow position:
               
chr22:27322534-27322170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
158, 6
               

               
Conread position:
               
162-425
               

               
Cow position:
               
chr22:3430429-3430162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
163-388
               

               
Cow position:
               
chr22:35902182-35902412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr22:39471918-39472153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
163-423
               

               
Cow position:
               
chr22:19645369-19645618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
163-439
               

               
Cow position:
               
chr22:8357814-8357542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 71
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr22:4583801-4583401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr22:10532729-10532344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 110
               

               
Conread position:
               
163-559
               

               
Cow position:
               
chr22:28639921-28640308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
164-382
               

               
Cow position:
               
chr22:16916697-16916915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
164-423
               

               
Cow position:
               
chr22:4736263-4735998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 243
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr22:18259446-18259066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
165-386
               

               
Cow position:
               
chr22:23630121-23630339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
165-396
               

               
Cow position:
               
chr22:33373478-33373243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
165-417
               

               
Cow position:
               
chr22:3240148-3239893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr22:13726885-13727067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr22:28569031-28568695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
166-546
               

               
Cow position:
               
chr22:530346-530723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
167-382
               

               
Cow position:
               
chr22:1384303-1384098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
167-408
               

               
Cow position:
               
chr22:24071423-24071657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
167-419
               

               
Cow position:
               
chr22:26112598-26112345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
167-425
               

               
Cow position:
               
chr22:12973929-12974195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
167-434
               

               
Cow position:
               
chr22:12188247-12188517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
167-434
               

               
Cow position:
               
chr22:12195333-12195604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr22:1501112-1500825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
167-511
               

               
Cow position:
               
chr22:47556087-47555741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
167-559
               

               
Cow position:
               
chr22:7882780-7882396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
168-493
               

               
Cow position:
               
chr22:25254405-25254083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
109, 146
               

               
Conread position:
               
169-559
               

               
Cow position:
               
chr22:16533300-16532922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
170-410
               

               
Cow position:
               
chr22:1541137-1540889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
171-559
               

               
Cow position:
               
chr22:4989936-4990326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr22:5674676-5674821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
172-371
               

               
Cow position:
               
chr22:35532999-35533209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr22:12673106-12673325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
172-419
               

               
Cow position:
               
chr22:24542594-24542341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
172-422
               

               
Cow position:
               
chr22:26233861-26233609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 231
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr22:28672360-28672082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr22:1871314-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
172-521
               

               
Cow position:
               
chr22:19891188-19890840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
172-546
               

               
Cow position:
               
chr22:40789781-40789424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
173-344
               

               
Cow position:
               
chr22:44642475-44642303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
173-350
               

               
Cow position:
               
chr22:4083832-4084012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
173-360
               

               
Cow position:
               
chr22:16639533-16639343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr22:6486197-6485988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
173-375
               

               
Cow position:
               
chr22:37140629-37140428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr22:30137075-30136824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr22:10557496-10557218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
173-487
               

               
Cow position:
               
chr22:12678191-12678506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 253
               

               
Conread position:
               
173-533
               

               
Cow position:
               
chr22:39215386-39215746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 223
               

               
Conread position:
               
173-544
               

               
Cow position:
               
chr22:34609220-34608858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
173-547
               

               
Cow position:
               
chr22:27819223-27818853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
173-556
               

               
Cow position:
               
chr22:28665508-28665130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
173-558
               

               
Cow position:
               
chr22:32892918-32892542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr22:2503051-2502677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
173-559
               

               
Cow position:
               
chr22:17764594-17764222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr22:19549068-19548884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr22:35627572-35627375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr22:43965927-43965621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
174-497
               

               
Cow position:
               
chr22:2408906-2409216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr22:8883235-8882876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
278, 200
               

               
Conread position:
               
174-547
               

               
Cow position:
               
chr22:22860686-22861055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 200
               

               
Conread position:
               
174-558
               

               
Cow position:
               
chr22:2623297-2623676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
174-558
               

               
Cow position:
               
chr22:27550586-27550198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
174-559
               

               
Cow position:
               
chr22:15154228-15153839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 231
               

               
Conread position:
               
175-282
               

               
Cow position:
               
chr22:27643978-27643870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
175-284
               

               
Cow position:
               
chr22:27645431-27645322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-350
               

               
Cow position:
               
chr22:45019429-45019598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
175-371
               

               
Cow position:
               
chr22:30713275-30713067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
175-371
               

               
Cow position:
               
chr22:36762256-36762065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr22:30615955-30615756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
175-474
               

               
Cow position:
               
chr22:23358375-23358078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
175-484
               

               
Cow position:
               
chr22:42618219-42617917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 65
               

               
Conread position:
               
175-512
               

               
Cow position:
               
chr22:23735787-23736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 192
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr22:5016713-5016354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
343, 21
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr22:6149167-6149540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr22:7913679-7913321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr22:15950166-15950537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 59
               

               
Conread position:
               
175-559
               

               
Cow position:
               
chr22:38930282-38930668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
176-324
               

               
Cow position:
               
chr22:46193366-46193221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr22:11033344-11033144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr22:30684945-30684756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
176-388
               

               
Cow position:
               
chr22:1959462-1959246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
176-393
               

               
Cow position:
               
chr22:11971485-11971702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
176-409
               

               
Cow position:
               
chr22:1821365-1821596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
176-457
               

               
Cow position:
               
chr22:2100727-2101003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
176-517
               

               
Cow position:
               
chr22:18838476-18838135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr22:9668804-9668407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
31, 150
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr22:24610859-24611238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
176-559
               

               
Cow position:
               
chr22:41854121-41853738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
177-355
               

               
Cow position:
               
chr22:12207487-12207663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr22:30362476-30362656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr22:30583881-30583690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
177-364
               

               
Cow position:
               
chr22:9075629-9075441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
177-369
               

               
Cow position:
               
chr22:43130916-43131115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
177-371
               

               
Cow position:
               
chr22:1552117-1551928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
177-371
               

               
Cow position:
               
chr22:5674028-5673838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
177-382
               

               
Cow position:
               
chr22:1991824-1991615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
177-395
               

               
Cow position:
               
chr22:29219677-29219901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 162
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr22:10402728-10402946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
177-400
               

               
Cow position:
               
chr22:45683811-45684040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
177-431
               

               
Cow position:
               
chr22:7496885-7497144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 96
               

               
Conread position:
               
177-440
               

               
Cow position:
               
chr22:25732743-25733010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
177-477
               

               
Cow position:
               
chr22:26017540-26017816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr22:37030303-37030613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
231, 26
               

               
Conread position:
               
177-496
               

               
Cow position:
               
chr22:1659389-1659067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
177-496
               

               
Cow position:
               
chr22:17652654-17652338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
177-502
               

               
Cow position:
               
chr22:33098172-33098511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
177-520
               

               
Cow position:
               
chr22:22013969-22013632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
177-532
               

               
Cow position:
               
chr22:19827639-19827996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr22:27681942-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
177-544
               

               
Cow position:
               
chr22:40387371-40387016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
177-546
               

               
Cow position:
               
chr22:41044685-41045063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
177-548
               

               
Cow position:
               
chr22:6622029-6622392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
177-554
               

               
Cow position:
               
chr22:34441411-34441784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
177-555
               

               
Cow position:
               
chr22:19173931-19173545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 267
               

               
Conread position:
               
177-557
               

               
Cow position:
               
chr22:3250760-3251147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:4156858-4157233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:7165193-7164795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:8324474-8324091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:15618829-15618456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 251
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:21568212-21567837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:32221855-32221485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr22:43131327-43131706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
178-355
               

               
Cow position:
               
chr22:11049531-11049360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
178-355
               

               
Cow position:
               
chr22:19306123-19305941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
178-369
               

               
Cow position:
               
chr22:10594831-10594637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr22:6800189-6800384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
172, 35
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr22:23801352-23801546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
178-385
               

               
Cow position:
               
chr22:20035039-20034842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
178-388
               

               
Cow position:
               
chr22:27401953-27401747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
178-402
               

               
Cow position:
               
chr22:35578553-35578782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
178-415
               

               
Cow position:
               
chr22:14488159-14487918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
178-424
               

               
Cow position:
               
chr22:24063326-24063064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr22:23372641-23372891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chr22:4656823-4657083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
178-487
               

               
Cow position:
               
chr22:39602508-39602194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 257
               

               
Conread position:
               
178-521
               

               
Cow position:
               
chr22:5837487-5837148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
178-546
               

               
Cow position:
               
chr22:23831151-23830787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
178-557
               

               
Cow position:
               
chr22:10416444-10416059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:1326642-1326263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:27577965-27577579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:32651723-32651340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:33447858-33448242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:36633419-36633072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
178-559
               

               
Cow position:
               
chr22:39472135-39472534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
179-372
               

               
Cow position:
               
chr22:1045966-1046166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
179-382
               

               
Cow position:
               
chr22:2036229-2036023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
179-409
               

               
Cow position:
               
chr22:1710754-1710518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
179-418
               

               
Cow position:
               
chr22:16840575-16840817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
179-424
               

               
Cow position:
               
chr22:1714645-1714891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
179-425
               

               
Cow position:
               
chr22:11215138-11214896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
179-519
               

               
Cow position:
               
chr22:15914823-15915160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
179-548
               

               
Cow position:
               
chr22:7154095-7153734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
338, 99
               

               
Conread position:
               
179-558
               

               
Cow position:
               
chr22:7967917-7967544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr22:30515487-30515094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr22:30999110-30998739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
179-560
               

               
Cow position:
               
chr22:10162189-10161806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
180-344
               

               
Cow position:
               
chr22:44018032-44018205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr22:16140744-16140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
180-372
               

               
Cow position:
               
chr22:38814983-38815173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
180-388
               

               
Cow position:
               
chr22:41025976-41025766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
180-398
               

               
Cow position:
               
chr22:26189091-26188870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
180-425
               

               
Cow position:
               
chr22:32514512-32514264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
180-431
               

               
Cow position:
               
chr22:33985588-33985834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
180-448
               

               
Cow position:
               
chr22:43977341-43977607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
180-476
               

               
Cow position:
               
chr22:12157631-12157918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
180-490
               

               
Cow position:
               
chr22:4533650-4533963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
187, 127
               

               
Conread position:
               
180-508
               

               
Cow position:
               
chr22:285148-285466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr22:37947939-37947610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
180-536
               

               
Cow position:
               
chr22:36562807-36563155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
180-544
               

               
Cow position:
               
chr22:6720865-6721216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
180-556
               

               
Cow position:
               
chr22:6709571-6709930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 241
               

               
Conread position:
               
180-556
               

               
Cow position:
               
chr22:10295243-10294887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 19
               

               
Conread position:
               
180-556
               

               
Cow position:
               
chr22:23115090-23115457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr22:864312-864676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr22:10122585-10122233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr22:12800895-12800505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
180-559
               

               
Cow position:
               
chr22:13286668-13286292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 200
               

               
Conread position:
               
181-362
               

               
Cow position:
               
chr22:11790201-11790019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
181-370
               

               
Cow position:
               
chr22:12637822-12637628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
181-398
               

               
Cow position:
               
chr22:45012544-45012753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr22:23265429-23265677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
181-434
               

               
Cow position:
               
chr22:38115404-38115157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
181-509
               

               
Cow position:
               
chr22:4132794-4132463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
181-547
               

               
Cow position:
               
chr22:8732346-8732703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr22:4075664-4076053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 244
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr22:36194049-36193697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
182-349
               

               
Cow position:
               
chr22:11202068-11201913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr22:2438758-2438946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
182-369
               

               
Cow position:
               
chr22:11836855-11837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
182-371
               

               
Cow position:
               
chr22:43730497-43730312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
182-375
               

               
Cow position:
               
chr22:2201950-2201763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
182-385
               

               
Cow position:
               
chr22:23209781-23209577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
182-388
               

               
Cow position:
               
chr22:7067671-7067455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
182-397
               

               
Cow position:
               
chr22:8447127-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
182-472
               

               
Cow position:
               
chr22:1350049-1349752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr22:1106288-1105985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
182-493
               

               
Cow position:
               
chr22:33522659-33522958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
182-517
               

               
Cow position:
               
chr22:12829392-12829727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
182-544
               

               
Cow position:
               
chr22:25236910-25237293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
182-556
               

               
Cow position:
               
chr22:27635695-27635321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr22:2470026-2470401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr22:36539440-36539827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
182-560
               

               
Cow position:
               
chr22:23806320-23806701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
182-560
               

               
Cow position:
               
chr22:26786575-26786198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 85
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr22:42772752-42772596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
183-365
               

               
Cow position:
               
chr22:33565879-33566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-366
               

               
Cow position:
               
chr22:30176938-30176749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
183-371
               

               
Cow position:
               
chr22:5778868-5779056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr22:18403460-18403267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr22:16129353-16129153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr22:14641639-14641872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
183-418
               

               
Cow position:
               
chr22:19413820-19414057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr22:35215765-35215521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
183-431
               

               
Cow position:
               
chr22:14545704-14545959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr22:23249522-23249800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
183-481
               

               
Cow position:
               
chr22:31810191-31810488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
183-493
               

               
Cow position:
               
chr22:11696978-11697288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr22:12749696-12750003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr22:41341728-41342059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
183-521
               

               
Cow position:
               
chr22:14142908-14143232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
183-557
               

               
Cow position:
               
chr22:25205748-25206122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
183-558
               

               
Cow position:
               
chr22:11147124-11146749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:1309520-1309886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:4108510-4108897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:9372743-9372354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 254
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:10338892-10339271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:14844758-14844416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
264, 15
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:15567804-15568172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:25943676-25943318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:26041824-26041441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
183-559
               

               
Cow position:
               
chr22:27826065-27825678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 248
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr22:3960084-3960246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
184-345
               

               
Cow position:
               
chr22:28804128-28803971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
184-350
               

               
Cow position:
               
chr22:1973606-1973773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
184-354
               

               
Cow position:
               
chr22:1625758-1625929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
116, 165
               

               
Conread position:
               
184-376
               

               
Cow position:
               
chr22:10671629-10671818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
184-381
               

               
Cow position:
               
chr22:3937277-3937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
184-381
               

               
Cow position:
               
chr22:25312729-25312526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr22:24134108-24134349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 182
               

               
Conread position:
               
184-471
               

               
Cow position:
               
chr22:21527124-21526849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
184-480
               

               
Cow position:
               
chr22:43704652-43704941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 121
               

               
Conread position:
               
184-523
               

               
Cow position:
               
chr22:12830233-12830565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
203, 17
               

               
Conread position:
               
184-530
               

               
Cow position:
               
chr22:12929062-12929404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
184-539
               

               
Cow position:
               
chr22:27619953-27619592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
184-555
               

               
Cow position:
               
chr22:26150899-26151262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
184-556
               

               
Cow position:
               
chr22:6754048-6754409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 248
               

               
Conread position:
               
184-558
               

               
Cow position:
               
chr22:5291071-5290689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 269
               

               
Conread position:
               
184-558
               

               
Cow position:
               
chr22:18193682-18193301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
184-558
               

               
Cow position:
               
chr22:46665280-46665655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr22:4563571-4563204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 94
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr22:6096801-6097183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 280
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr22:25247122-25246751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
185-406
               

               
Cow position:
               
chr22:30687231-30687016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
205, 11
               

               
Conread position:
               
185-409
               

               
Cow position:
               
chr22:1320702-1320481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
185-431
               

               
Cow position:
               
chr22:37145536-37145294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
185-442
               

               
Cow position:
               
chr22:39446509-39446247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
185-458
               

               
Cow position:
               
chr22:243315-243053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 17
               

               
Conread position:
               
185-492
               

               
Cow position:
               
chr22:34619023-34618705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
97, 256
               

               
Conread position:
               
185-548
               

               
Cow position:
               
chr22:22908382-22908044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
330, 43
               

               
Conread position:
               
185-557
               

               
Cow position:
               
chr22:10303229-10302858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
185-558
               

               
Cow position:
               
chr22:7082241-7081872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:8733130-8733486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:12313633-12313265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 88
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:16251352-16251721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:22613312-22612954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:32698973-32698602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:36432760-36433124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:38939736-38940107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr22:40374820-40374448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
185-562
               

               
Cow position:
               
chr22:23833503-23833126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr22:670919-671112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr22:21484146-21483969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr22:12777169-12777364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
186-539
               

               
Cow position:
               
chr22:27224324-27223991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
186-548
               

               
Cow position:
               
chr22:34895170-34894824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
186-552
               

               
Cow position:
               
chr22:17120665-17120318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
186-558
               

               
Cow position:
               
chr22:36560439-36560814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr22:12681587-12681955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr22:15490869-15490501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 236
               

               
Conread position:
               
187-403
               

               
Cow position:
               
chr22:43573162-43572938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
187-404
               

               
Cow position:
               
chr22:4628774-4628547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
187-504
               

               
Cow position:
               
chr22:3282618-3282924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
187-514
               

               
Cow position:
               
chr22:14006391-14006067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
187-521
               

               
Cow position:
               
chr22:31599644-31599330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
187-549
               

               
Cow position:
               
chr22:1035611-1035966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
254, 16
               

               
Conread position:
               
187-556
               

               
Cow position:
               
chr22:1563028-1563405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 189
               

               
Conread position:
               
187-556
               

               
Cow position:
               
chr22:2643326-2642958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
187-558
               

               
Cow position:
               
chr22:1653975-1654351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
187-559
               

               
Cow position:
               
chr22:5616507-5616146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
188-369
               

               
Cow position:
               
chr22:1105414-1105595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
188-369
               

               
Cow position:
               
chr22:4750927-4751115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
188-374
               

               
Cow position:
               
chr22:15695523-15695701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
188-375
               

               
Cow position:
               
chr22:18442534-18442726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
188-384
               

               
Cow position:
               
chr22:3540909-3541106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
188-419
               

               
Cow position:
               
chr22:21905679-21905451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
188-425
               

               
Cow position:
               
chr22:47562922-47562676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
188-426
               

               
Cow position:
               
chr22:12447658-12447428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
219, 10
               

               
Conread position:
               
188-427
               

               
Cow position:
               
chr22:11352235-11352481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
188-493
               

               
Cow position:
               
chr22:24903802-24903497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 224
               

               
Conread position:
               
188-537
               

               
Cow position:
               
chr22:13735070-13735401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr22:17852426-17852783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr22:27730251-27729896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr22:28071766-28071396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr22:34616526-34616146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
87, 234
               

               
Conread position:
               
189-341
               

               
Cow position:
               
chr22:29546846-29546696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr22:9983616-9983774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr22:30293902-30293742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr22:37702184-37702011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
189-369
               

               
Cow position:
               
chr22:14432357-14432542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr22:8287389-8287210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
189-381
               

               
Cow position:
               
chr22:10660087-10659898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr22:14601966-14602156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
189-385
               

               
Cow position:
               
chr22:16340067-16339868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
189-387
               

               
Cow position:
               
chr22:4718315-4718121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
189-388
               

               
Cow position:
               
chr22:45771814-45772014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
189-389
               

               
Cow position:
               
chr22:45788818-45788619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
189-396
               

               
Cow position:
               
chr22:40371574-40371378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
189-404
               

               
Cow position:
               
chr22:8327951-8327740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
189-431
               

               
Cow position:
               
chr22:26804032-26803785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
189-435
               

               
Cow position:
               
chr22:6289288-6289540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
189-444
               

               
Cow position:
               
chr22:12902646-12902890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
189-460
               

               
Cow position:
               
chr22:2075791-2076068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 195
               

               
Conread position:
               
189-465
               

               
Cow position:
               
chr22:15737437-15737168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
189-490
               

               
Cow position:
               
chr22:25690067-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
189-492
               

               
Cow position:
               
chr22:14214157-14214453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
189-495
               

               
Cow position:
               
chr22:27275676-27275370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 200
               

               
Conread position:
               
189-518
               

               
Cow position:
               
chr22:38320498-38320795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
189-543
               

               
Cow position:
               
chr22:34736057-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
189-544
               

               
Cow position:
               
chr22:6494385-6494028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 229
               

               
Conread position:
               
189-544
               

               
Cow position:
               
chr22:41970949-41971300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
189-555
               

               
Cow position:
               
chr22:4060739-4061100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
189-555
               

               
Cow position:
               
chr22:8430102-8429730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
189-556
               

               
Cow position:
               
chr22:2095769-2095397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 237
               

               
Conread position:
               
189-556
               

               
Cow position:
               
chr22:3566378-3566021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
189-556
               

               
Cow position:
               
chr22:4357293-4356939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 45
               

               
Conread position:
               
189-556
               

               
Cow position:
               
chr22:23688993-23689360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
189-557
               

               
Cow position:
               
chr22:42635220-42635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
189-557
               

               
Cow position:
               
chr22:43812232-43812575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 18
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:59823-59453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:3987731-3987359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:4162372-4162741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:4993706-4994074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
190, 46
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:32327009-32326646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
189-558
               

               
Cow position:
               
chr22:33399281-33399638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:1289320-1289673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 96
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:10983573-10983190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:11813512-11813879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 282
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:13687903-13688270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:20862554-20862916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
223, 78
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:26134009-26134389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
189-559
               

               
Cow position:
               
chr22:37202057-37201695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
190-371
               

               
Cow position:
               
chr22:3257459-3257634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
190-376
               

               
Cow position:
               
chr22:11039670-11039477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr22:13951471-13951279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr22:8571129-8570899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
190-491
               

               
Cow position:
               
chr22:1984067-1983762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 249
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr22:3301128-3301442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
190-506
               

               
Cow position:
               
chr22:3842826-3842513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr22:13222333-13222006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
190-537
               

               
Cow position:
               
chr22:44410924-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
190-545
               

               
Cow position:
               
chr22:16094698-16095045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
190-556
               

               
Cow position:
               
chr22:29642321-29641958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
190-558
               

               
Cow position:
               
chr22:12573414-12573051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 180
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr22:1651698-1651349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr22:39507831-39508198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 130
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr22:40048767-40048399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 172
               

               
Conread position:
               
190-559
               

               
Cow position:
               
chr22:44741278-44740943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
191-330
               

               
Cow position:
               
chr22:28634372-28634512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
191-355
               

               
Cow position:
               
chr22:6127971-6128134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
191-371
               

               
Cow position:
               
chr22:1074474-1074291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
191-425
               

               
Cow position:
               
chr22:4164185-4163952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
191-431
               

               
Cow position:
               
chr22:7361768-7362011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
191-483
               

               
Cow position:
               
chr22:1858530-1858251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
191-529
               

               
Cow position:
               
chr22:617328-616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
191-547
               

               
Cow position:
               
chr22:37029398-37029745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
191-558
               

               
Cow position:
               
chr22:28371139-28370793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr22:10567509-10567858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr22:13957437-13957803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 323
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr22:17949769-17950117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr22:25917251-25916884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr22:13719831-13720005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr22:17746026-17745834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr22:6106164-6106363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
192-425
               

               
Cow position:
               
chr22:3470497-3470260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr22:1065315-1065078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
192-469
               

               
Cow position:
               
chr22:6176072-6176358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 202
               

               
Conread position:
               
192-558
               

               
Cow position:
               
chr22:4044130-4043775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
192-559
               

               
Cow position:
               
chr22:33485416-33485760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
193-376
               

               
Cow position:
               
chr22:10763986-10763805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr22:24890427-24890227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 189
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr22:6372154-6372347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
193-559
               

               
Cow position:
               
chr22:40349548-40349192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
194-365
               

               
Cow position:
               
chr22:14236698-14236862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
194-371
               

               
Cow position:
               
chr22:13930486-13930307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr22:2704506-2704306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr22:27580220-27580412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
194-400
               

               
Cow position:
               
chr22:1304351-1304556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
181, 9
               

               
Conread position:
               
194-419
               

               
Cow position:
               
chr22:23077271-23077513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr22:13092986-13093272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
194-513
               

               
Cow position:
               
chr22:30697352-30697048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
194-547
               

               
Cow position:
               
chr22:2524154-2523820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
194-548
               

               
Cow position:
               
chr22:30269607-30269266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
194-557
               

               
Cow position:
               
chr22:964968-965331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
194-559
               

               
Cow position:
               
chr22:31870050-31870417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 190
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr22:26945366-26945528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr22:8540079-8539854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
195-469
               

               
Cow position:
               
chr22:2109425-2109691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
195-559
               

               
Cow position:
               
chr22:42685086-42684744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
279, 81
               

               
Conread position:
               
196-342
               

               
Cow position:
               
chr22:15753705-15753561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
196-544
               

               
Cow position:
               
chr22:6961074-6960716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
196-555
               

               
Cow position:
               
chr22:6327571-6327920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
196-555
               

               
Cow position:
               
chr22:27171066-27171409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
196-557
               

               
Cow position:
               
chr22:2404084-2403720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr22:19652787-19653143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr22:26339967-26339598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 234
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr22:18020829-18021179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr22:44717921-44717555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 10
               

               
Conread position:
               
198-317
               

               
Cow position:
               
chr22:17948168-17948290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
198-360
               

               
Cow position:
               
chr22:12446530-12446679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
198-369
               

               
Cow position:
               
chr22:16564348-16564177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
198-382
               

               
Cow position:
               
chr22:40870030-40869846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
198-413
               

               
Cow position:
               
chr22:7584042-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
198-417
               

               
Cow position:
               
chr22:23277539-23277336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
198-419
               

               
Cow position:
               
chr22:10682317-10682536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
192, 39
               

               
Conread position:
               
198-425
               

               
Cow position:
               
chr22:4156614-4156844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
198-426
               

               
Cow position:
               
chr22:4310168-4310399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
198-434
               

               
Cow position:
               
chr22:5712785-5712552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
198-435
               

               
Cow position:
               
chr22:26417481-26417248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
198-440
               

               
Cow position:
               
chr22:14141140-14141383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 233
               

               
Conread position:
               
198-475
               

               
Cow position:
               
chr22:35029460-35029191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
229, 79
               

               
Conread position:
               
198-493
               

               
Cow position:
               
chr22:18933511-18933814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr22:8800245-8800560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr22:12981524-12981826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 156
               

               
Conread position:
               
198-521
               

               
Cow position:
               
chr22:27828579-27828264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
8, 204
               

               
Conread position:
               
198-532
               

               
Cow position:
               
chr22:27581626-27581306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
224, 40
               

               
Conread position:
               
198-542
               

               
Cow position:
               
chr22:34632352-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 243
               

               
Conread position:
               
198-547
               

               
Cow position:
               
chr22:14372368-14372039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 86
               

               
Conread position:
               
198-548
               

               
Cow position:
               
chr22:22553046-22553382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
198-554
               

               
Cow position:
               
chr22:41496182-41495823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
198-556
               

               
Cow position:
               
chr22:4535120-4535479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
198-557
               

               
Cow position:
               
chr22:12803187-12803541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr22:23980006-23980370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:534690-534339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 66
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:644580-644919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
219, 37
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:1849276-1848906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:5384835-5384493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
242, 62
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:8138054-8138416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
89, 233
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:12316009-12315653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:14178631-14178985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 81
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:14690758-14691130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 246
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:23804783-23805140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:27274488-27274848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 215
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr22:41982522-41982873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
199-413
               

               
Cow position:
               
chr22:16813995-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
199-414
               

               
Cow position:
               
chr22:33948777-33948989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
199-425
               

               
Cow position:
               
chr22:17198338-17198111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
199-431
               

               
Cow position:
               
chr22:13891775-13891528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
111, 177
               

               
Conread position:
               
199-462
               

               
Cow position:
               
chr22:4054403-4054647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
242, 73
               

               
Conread position:
               
199-516
               

               
Cow position:
               
chr22:6852379-6852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 185
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:890957-891294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:3534131-3533786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:4373233-4372887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 8
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:17132205-17132568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 207
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:26166419-26166778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr22:41898250-41898604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
200-338
               

               
Cow position:
               
chr22:12059610-12059747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr22:18847772-18847976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
200-425
               

               
Cow position:
               
chr22:16806786-16806568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
200-474
               

               
Cow position:
               
chr22:26056668-26056943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
200-527
               

               
Cow position:
               
chr22:1987170-1986873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
200-548
               

               
Cow position:
               
chr22:43398198-43397866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
200-557
               

               
Cow position:
               
chr22:16823316-16822947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
200-557
               

               
Cow position:
               
chr22:38438959-38439310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
200-558
               

               
Cow position:
               
chr22:17152887-17152524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 241
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr22:21890167-21890514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
201-370
               

               
Cow position:
               
chr22:23762654-23762823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr22:48155619-48155442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
201-397
               

               
Cow position:
               
chr22:2184518-2184711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
201-559
               

               
Cow position:
               
chr22:9127596-9127248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
201-559
               

               
Cow position:
               
chr22:30699363-30699021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 87
               

               
Conread position:
               
202-368
               

               
Cow position:
               
chr22:18145732-18145566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
202-371
               

               
Cow position:
               
chr22:21041958-21042119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr22:3388925-3388766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
202-381
               

               
Cow position:
               
chr22:20472176-20472345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
202-391
               

               
Cow position:
               
chr22:2436426-2436611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
202-427
               

               
Cow position:
               
chr22:1776260-1776030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
202-548
               

               
Cow position:
               
chr22:3316290-3315964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
202-554
               

               
Cow position:
               
chr22:40072158-40071828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
202-557
               

               
Cow position:
               
chr22:6610161-6610505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:6215360-6215715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 0
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:9977991-9977665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:10684901-10685246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:11131066-11130712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 0
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:23180849-23181194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:24066047-24066392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 22
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr22:34475790-34476166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 242
               

               
Conread position:
               
203-292
               

               
Cow position:
               
chr22:9745398-9745487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-344
               

               
Cow position:
               
chr22:26775700-26775554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
203-365
               

               
Cow position:
               
chr22:8480305-8480136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
203-372
               

               
Cow position:
               
chr22:1728428-1728257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
203-372
               

               
Cow position:
               
chr22:27591397-27591220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
203-373
               

               
Cow position:
               
chr22:9326037-9325862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
203-374
               

               
Cow position:
               
chr22:12741086-12741248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
203-376
               

               
Cow position:
               
chr22:10913854-10913686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
203-392
               

               
Cow position:
               
chr22:33031005-33030804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
203-408
               

               
Cow position:
               
chr22:23780377-23780578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
203-409
               

               
Cow position:
               
chr22:30607055-30606845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
203-425
               

               
Cow position:
               
chr22:7832153-7832381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
203-431
               

               
Cow position:
               
chr22:42230325-42230555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
203-487
               

               
Cow position:
               
chr22:16541453-16541738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 228
               

               
Conread position:
               
203-493
               

               
Cow position:
               
chr22:25809085-25809362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr22:5595612-5595913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
203-544
               

               
Cow position:
               
chr22:15668286-15668617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr22:8090339-8090675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr22:25742770-25743098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 31
               

               
Conread position:
               
203-558
               

               
Cow position:
               
chr22:21746834-21746480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 61
               

               
Conread position:
               
203-558
               

               
Cow position:
               
chr22:22023100-22022733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 284
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr22:11370396-11370745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr22:19341390-19341045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr22:28357223-28356881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr22:30818405-30818053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 81
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr22:11497692-11497520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
204-422
               

               
Cow position:
               
chr22:11189225-11189008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
110, 157
               

               
Conread position:
               
204-425
               

               
Cow position:
               
chr22:18966966-18967185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
204-521
               

               
Cow position:
               
chr22:1911844-1911550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-558
               

               
Cow position:
               
chr22:8418659-8418309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
205-371
               

               
Cow position:
               
chr22:24047426-24047584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
205-392
               

               
Cow position:
               
chr22:6203145-6202955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
205-401
               

               
Cow position:
               
chr22:6359999-6360187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
205-477
               

               
Cow position:
               
chr22:1588489-1588217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 243
               

               
Conread position:
               
205-558
               

               
Cow position:
               
chr22:24583878-24584204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr22:25221709-25222057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 76
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr22:34726869-34726514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
206-390
               

               
Cow position:
               
chr22:14676881-14676693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
206-512
               

               
Cow position:
               
chr22:13866861-13866552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
69, 233
               

               
Conread position:
               
206-548
               

               
Cow position:
               
chr22:5467172-5467521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
161, 75
               

               
Conread position:
               
206-558
               

               
Cow position:
               
chr22:3909127-3908765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
206-559
               

               
Cow position:
               
chr22:32480274-32480637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 246
               

               
Conread position:
               
207-341
               

               
Cow position:
               
chr22:27462753-27462620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
207-392
               

               
Cow position:
               
chr22:1830235-1830056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
207-395
               

               
Cow position:
               
chr22:14644025-14643839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
207-401
               

               
Cow position:
               
chr22:1523414-1523215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr22:28493089-28493286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
207-423
               

               
Cow position:
               
chr22:16845201-16845429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr22:23675781-23676011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
207-498
               

               
Cow position:
               
chr22:899030-898746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
207-517
               

               
Cow position:
               
chr22:12892169-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
207-547
               

               
Cow position:
               
chr22:16621384-16621024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 254
               

               
Conread position:
               
207-555
               

               
Cow position:
               
chr22:3367388-3367037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
207-558
               

               
Cow position:
               
chr22:20627025-20626684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr22:10936657-10936987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr22:21012577-21012232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr22:25361669-25361332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
207-559
               

               
Cow position:
               
chr22:27047204-27047559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr22:21499653-21499801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
208-408
               

               
Cow position:
               
chr22:8535872-8535664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr22:17129194-17128977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
211, 26
               

               
Conread position:
               
208-477
               

               
Cow position:
               
chr22:19459853-19460127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 113
               

               
Conread position:
               
208-559
               

               
Cow position:
               
chr22:14245247-14245593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
208-559
               

               
Cow position:
               
chr22:45796535-45796185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
209-490
               

               
Cow position:
               
chr22:43321542-43321259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
209-535
               

               
Cow position:
               
chr22:10609548-10609219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
209-537
               

               
Cow position:
               
chr22:45513335-45513651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
209-553
               

               
Cow position:
               
chr22:45808019-45807688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr22:10981575-10981229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr22:12389292-12388933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 228
               

               
Conread position:
               
210-559
               

               
Cow position:
               
chr22:30094432-30094087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 84
               

               
Conread position:
               
211-388
               

               
Cow position:
               
chr22:29135143-29134968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
211-544
               

               
Cow position:
               
chr22:27267742-27267397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
212-374
               

               
Cow position:
               
chr22:15006925-15007087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
212-388
               

               
Cow position:
               
chr22:8331187-8331008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
212-548
               

               
Cow position:
               
chr22:46610590-46610927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
213-545
               

               
Cow position:
               
chr22:13669981-13670318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
214-541
               

               
Cow position:
               
chr22:21393153-21393459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr22:28146867-28146526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 254
               

               
Conread position:
               
215-478
               

               
Cow position:
               
chr22:1026087-1025810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr22:41636468-41636615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
216-374
               

               
Cow position:
               
chr22:755670-755823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
216-374
               

               
Cow position:
               
chr22:9154045-9153887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr22:1819348-1819519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-423
               

               
Cow position:
               
chr22:2644116-2643905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 190
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chr22:16724505-16724714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
216-493
               

               
Cow position:
               
chr22:9597402-9597672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
216-540
               

               
Cow position:
               
chr22:27066566-27066253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
216-555
               

               
Cow position:
               
chr22:14378509-14378833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
216-558
               

               
Cow position:
               
chr22:17126630-17126297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
302, 72
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr22:10631571-10631218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
217-368
               

               
Cow position:
               
chr22:26931043-26930891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
217-427
               

               
Cow position:
               
chr22:14600151-14600363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
217-544
               

               
Cow position:
               
chr22:28057860-28058197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
217-544
               

               
Cow position:
               
chr22:31646665-31646350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr22:30484086-30483764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 55
               

               
Conread position:
               
217-559
               

               
Cow position:
               
chr22:29014066-29013719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
218-350
               

               
Cow position:
               
chr22:18441265-18441129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
218-388
               

               
Cow position:
               
chr22:6793699-6793864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
219-374
               

               
Cow position:
               
chr22:16655560-16655714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
219-559
               

               
Cow position:
               
chr22:6574906-6574580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
220-481
               

               
Cow position:
               
chr22:9171581-9171325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
221-559
               

               
Cow position:
               
chr22:15068607-15068267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
222-542
               

               
Cow position:
               
chr22:21325559-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
299, 29
               

               
Conread position:
               
222-559
               

               
Cow position:
               
chr22:14365775-14366108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
223-555
               

               
Cow position:
               
chr22:1067737-1068067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 156
               

               
Conread position:
               
225-559
               

               
Cow position:
               
chr22:15024935-15025263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 204
               

               
Conread position:
               
226-388
               

               
Cow position:
               
chr22:7512792-7512625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
227-559
               

               
Cow position:
               
chr22:29289977-29290291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr22:26075086-26074822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
237-546
               

               
Cow position:
               
chr22:17224506-17224809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
241-493
               

               
Cow position:
               
chr22:24915997-24915745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 191
               

               
Conread position:
               
241-526
               

               
Cow position:
               
chr22:4542090-4541816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
242-378
               

               
Cow position:
               
chr22:37069200-37069335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
242-463
               

               
Cow position:
               
chr22:23440139-23440358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
242-487
               

               
Cow position:
               
chr22:24509501-24509761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
242-504
               

               
Cow position:
               
chr22:10286125-10285863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
242-559
               

               
Cow position:
               
chr22:26316611-26316311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
282, 13
               

               
Conread position:
               
243-559
               

               
Cow position:
               
chr22:4119407-4119723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 194
               

               
Conread position:
               
245-395
               

               
Cow position:
               
chr22:749261-749410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
246-491
               

               
Cow position:
               
chr22:4315787-4315538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
247-558
               

               
Cow position:
               
chr22:46567743-46568038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
250-559
               

               
Cow position:
               
chr22:7252494-7252802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
284, 182
               

               
Conread position:
               
251-559
               

               
Cow position:
               
chr22:15039036-15039340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
254-413
               

               
Cow position:
               
chr22:8710229-8710388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-493
               

               
Cow position:
               
chr22:29389920-29389682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
258-559
               

               
Cow position:
               
chr22:13769612-13769316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
259-376
               

               
Cow position:
               
chr22:10585444-10585562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
262-559
               

               
Cow position:
               
chr22:2627717-2627412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
262-559
               

               
Cow position:
               
chr22:10315214-10314917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
264-489
               

               
Cow position:
               
chr22:29185474-29185696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
265-538
               

               
Cow position:
               
chr22:17294802-17295067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
266-553
               

               
Cow position:
               
chr22:9521274-9520994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
266-559
               

               
Cow position:
               
chr22:1591155-1590865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
268-530
               

               
Cow position:
               
chr22:25387457-25387195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr22:17814363-17814066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr22:26969918-26969624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
269-371
               

               
Cow position:
               
chr22:14815978-14816081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
269-376
               

               
Cow position:
               
chr22:6138366-6138476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
269-376
               

               
Cow position:
               
chr22:41682299-41682406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-387
               

               
Cow position:
               
chr22:5411974-5411854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
269-393
               

               
Cow position:
               
chr22:31309013-31308889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-399
               

               
Cow position:
               
chr22:3997884-3997752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr22:28120853-28120694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
269-431
               

               
Cow position:
               
chr22:1977878-1977716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-435
               

               
Cow position:
               
chr22:23036296-23036127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
269-486
               

               
Cow position:
               
chr22:10553556-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr22:10533723-10533505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr22:26123023-26122809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
269-491
               

               
Cow position:
               
chr22:13878306-13878094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
269-502
               

               
Cow position:
               
chr22:34104543-34104776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 145
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr22:31154086-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 162
               

               
Conread position:
               
269-544
               

               
Cow position:
               
chr22:44180721-44180448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
269-547
               

               
Cow position:
               
chr22:3965315-3965038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 158
               

               
Conread position:
               
269-548
               

               
Cow position:
               
chr22:13841267-13840987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
249, 19
               

               
Conread position:
               
269-548
               

               
Cow position:
               
chr22:32895350-32895070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
269-555
               

               
Cow position:
               
chr22:31510249-31510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 154
               

               
Conread position:
               
269-558
               

               
Cow position:
               
chr22:4017602-4017320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
269-558
               

               
Cow position:
               
chr22:8115959-8116244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
269-558
               

               
Cow position:
               
chr22:43119600-43119885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:3317249-3316964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 64
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:3950381-3950092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:10421162-10420873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 172
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:16044287-16044579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:21295596-21295880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:27431576-27431841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
269-559
               

               
Cow position:
               
chr22:27835665-27835372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
269-560
               

               
Cow position:
               
chr22:21530230-21530510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 152
               

               
Conread position:
               
270-374
               

               
Cow position:
               
chr22:531353-531455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
270-425
               

               
Cow position:
               
chr22:1838437-1838281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
270-425
               

               
Cow position:
               
chr22:6326572-6326417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-484
               

               
Cow position:
               
chr22:26706679-26706891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
270-521
               

               
Cow position:
               
chr22:6936386-6936145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
270-546
               

               
Cow position:
               
chr22:25540125-25539846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
270-558
               

               
Cow position:
               
chr22:23855097-23854816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
270-559
               

               
Cow position:
               
chr22:23176312-23176599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
271-548
               

               
Cow position:
               
chr22:34750798-34750531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr22:877642-877357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 158
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr22:1279260-1279546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
272-402
               

               
Cow position:
               
chr22:12914740-12914610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
272-419
               

               
Cow position:
               
chr22:10324007-10323859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr22:23398280-23398429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
272-464
               

               
Cow position:
               
chr22:21235310-21235497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
272-538
               

               
Cow position:
               
chr22:27328767-27329029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
272-558
               

               
Cow position:
               
chr22:16327620-16327346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
252, 32
               

               
Conread position:
               
273-559
               

               
Cow position:
               
chr22:30049441-30049727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 164
               

               
Conread position:
               
273-559
               

               
Cow position:
               
chr22:34606714-34606425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
274-451
               

               
Cow position:
               
chr22:18941872-18941695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
274-493
               

               
Cow position:
               
chr22:23750773-23750985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
274-548
               

               
Cow position:
               
chr22:2216932-2216676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
274-556
               

               
Cow position:
               
chr22:1265800-1266085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
274-557
               

               
Cow position:
               
chr22:2912466-2912738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
244, 50
               

               
Conread position:
               
274-558
               

               
Cow position:
               
chr22:6122761-6123057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 216
               

               
Conread position:
               
274-559
               

               
Cow position:
               
chr22:8840729-8840429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
274-559
               

               
Cow position:
               
chr22:24175772-24176041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
244, 83
               

               
Conread position:
               
276-559
               

               
Cow position:
               
chr22:2148689-2148419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr22:22606346-22606216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr22:8481763-8481502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr22:26659162-26658899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr22:10919734-10920018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
241, 29
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr22:12967947-12968229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
277-559
               

               
Cow position:
               
chr22:32188733-32189006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
278-425
               

               
Cow position:
               
chr22:14381779-14381632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-427
               

               
Cow position:
               
chr22:36192585-36192438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
278-548
               

               
Cow position:
               
chr22:27741010-27740745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
235, 100
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr22:15398459-15398736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr22:23857167-23856891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr22:14924613-14924879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
279-557
               

               
Cow position:
               
chr22:7852081-7851807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
279-557
               

               
Cow position:
               
chr22:21502863-21502587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
280-392
               

               
Cow position:
               
chr22:29325534-29325646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-557
               

               
Cow position:
               
chr22:37324661-37324390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
280-559
               

               
Cow position:
               
chr22:15090860-15090582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 168
               

               
Conread position:
               
282-425
               

               
Cow position:
               
chr22:4149535-4149395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
283-369
               

               
Cow position:
               
chr22:9745590-9745676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
283-388
               

               
Cow position:
               
chr22:44263490-44263385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
283-547
               

               
Cow position:
               
chr22:590453-590193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
283-556
               

               
Cow position:
               
chr22:5337483-5337751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
283-559
               

               
Cow position:
               
chr22:24628543-24628808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
235, 84
               

               
Conread position:
               
283-559
               

               
Cow position:
               
chr22:34712840-34712559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
236, 33
               

               
Conread position:
               
284-557
               

               
Cow position:
               
chr22:35753189-35753458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
285-392
               

               
Cow position:
               
chr22:14482421-14482527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
285-417
               

               
Cow position:
               
chr22:4012629-4012500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
285-479
               

               
Cow position:
               
chr22:45505892-45506083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
285-542
               

               
Cow position:
               
chr22:24734204-24734453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
285-558
               

               
Cow position:
               
chr22:21355028-21355298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 156
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr22:10633027-10632761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr22:13861689-13861431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
285-559
               

               
Cow position:
               
chr22:23121889-23122180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 156
               

               
Conread position:
               
286-558
               

               
Cow position:
               
chr22:45846253-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
286-559
               

               
Cow position:
               
chr22:26141386-26141118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
287-559
               

               
Cow position:
               
chr22:26184050-26184320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
288-390
               

               
Cow position:
               
chr22:11174041-11174143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
288-425
               

               
Cow position:
               
chr22:11344618-11344483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-519
               

               
Cow position:
               
chr22:12341306-12341077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr22:4651287-4651023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr22:19775323-19775590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
288-559
               

               
Cow position:
               
chr22:41245364-41245087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
288-561
               

               
Cow position:
               
chr22:7102942-7102672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
203, 90
               

               
Conread position:
               
289-469
               

               
Cow position:
               
chr22:4137542-4137719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chr22:24336636-24336432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
289-521
               

               
Cow position:
               
chr22:12527013-12527245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
289-544
               

               
Cow position:
               
chr22:43743237-43743474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 6
               

               
Conread position:
               
291-559
               

               
Cow position:
               
chr22:11458922-11458670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
211, 23
               

               
Conread position:
               
291-559
               

               
Cow position:
               
chr22:23403535-23403805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr22:28704290-28704116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
293-427
               

               
Cow position:
               
chr22:34930673-34930805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
293-500
               

               
Cow position:
               
chr22:10669369-10669573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
294-397
               

               
Cow position:
               
chr22:28649615-28649718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
294-547
               

               
Cow position:
               
chr22:13300515-13300267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr22:846007-845744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
294-559
               

               
Cow position:
               
chr22:4645875-4645615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
296-559
               

               
Cow position:
               
chr22:17125684-17125424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
299-486
               

               
Cow position:
               
chr22:10929665-10929845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
299-493
               

               
Cow position:
               
chr22:18293666-18293853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
300-469
               

               
Cow position:
               
chr22:10835393-10835553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
300-476
               

               
Cow position:
               
chr22:12686588-12686754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
300-555
               

               
Cow position:
               
chr22:14638379-14638635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
300-559
               

               
Cow position:
               
chr22:9283500-9283756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 144
               

               
Conread position:
               
300-559
               

               
Cow position:
               
chr22:12946084-12946327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
218, 53
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr22:4011281-4011064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
301-559
               

               
Cow position:
               
chr22:40720197-40720442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr22:11778514-11778769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 98
               

               
Conread position:
               
303-557
               

               
Cow position:
               
chr22:15358340-15358087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
303-559
               

               
Cow position:
               
chr22:139206-139462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 34
               

               
Conread position:
               
303-559
               

               
Cow position:
               
chr22:16650104-16650357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 110
               

               
Conread position:
               
303-559
               

               
Cow position:
               
chr22:42945953-42946214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
306-559
               

               
Cow position:
               
chr22:7885082-7884833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
309-559
               

               
Cow position:
               
chr22:22160815-22160566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
310-559
               

               
Cow position:
               
chr22:43291814-43292055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr22:30577599-30577384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
314-558
               

               
Cow position:
               
chr22:42605721-42605471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr22:10598469-10598240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr22:33386426-33386662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
316-556
               

               
Cow position:
               
chr22:34398374-34398613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
316-559
               

               
Cow position:
               
chr22:11257666-11257893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
318-559
               

               
Cow position:
               
chr22:912177-911940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
319-548
               

               
Cow position:
               
chr22:30964207-30963974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
323-495
               

               
Cow position:
               
chr22:41979771-41979937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
323-559
               

               
Cow position:
               
chr22:31592781-31593014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr22:3993686-3993454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
324-559
               

               
Cow position:
               
chr22:5675107-5675332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
325-556
               

               
Cow position:
               
chr22:17992958-17993187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
328-529
               

               
Cow position:
               
chr22:15731264-15731072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
328-546
               

               
Cow position:
               
chr22:7838660-7838449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
332-547
               

               
Cow position:
               
chr22:14882050-14882255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
337-558
               

               
Cow position:
               
chr22:1874755-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
5, 95
               

               
Conread position:
               
340-543
               

               
Cow position:
               
chr22:45019786-45019978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
341-544
               

               
Cow position:
               
chr22:26097563-26097763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
341-559
               

               
Cow position:
               
chr22:15753441-15753212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 96
               

               
Conread position:
               
342-559
               

               
Cow position:
               
chr22:34597986-34597777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
344-548
               

               
Cow position:
               
chr22:10677937-10678131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
344-559
               

               
Cow position:
               
chr22:11745850-11746061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
346-559
               

               
Cow position:
               
chr22:1640248-1640463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
348-547
               

               
Cow position:
               
chr22:226404-226598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
349-556
               

               
Cow position:
               
chr22:13011219-13011424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
362-557
               

               
Cow position:
               
chr22:25629728-25629919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
364-559
               

               
Cow position:
               
chr22:27292125-27291937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
365-559
               

               
Cow position:
               
chr22:10585670-10585859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
365-559
               

               
Cow position:
               
chr22:41270968-41271157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
367-559
               

               
Cow position:
               
chr22:4974391-4974582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
374-547
               

               
Cow position:
               
chr22:11500803-11500634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
381-559
               

               
Cow position:
               
chr22:13951197-13951019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
390-559
               

               
Cow position:
               
chr22:45271591-45271424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
395-559
               

               
Cow position:
               
chr22:12599090-12598929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
403-555
               

               
Cow position:
               
chr22:45685025-45685179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
406-556
               

               
Cow position:
               
chr22:9734845-9734699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
409-556
               

               
Cow position:
               
chr22:1342727-1342580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
412-559
               

               
Cow position:
               
chr22:30689622-30689477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
425-559
               

               
Cow position:
               
chr22:8446914-8446781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
433-560
               

               
Cow position:
               
chr22:33949032-33949158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
446-547
               

               
Cow position:
               
chr22:19848440-19848541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
450-559
               

               
Cow position:
               
chr22:21526641-21526750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
466-559
               

               
Cow position:
               
chr22:34930809-34930902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.