Cow genome map
| Conread name: | Ss1.1-rski0117_a13.5 |
| Conread position: | 1-571 |
| Cow position: | chr23:789372-788816 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 47 |
| Conread position: | 315-464 |
| Cow position: | chr23:859368-859213 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 315-555 |
| Cow position: | chr23:838113-837864 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-555 |
| Cow position: | chr23:876434-876185 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-581 |
| Cow position: | chr23:823568-823293 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-581 |
| Cow position: | chr23:859665-859390 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-581 |
| Cow position: | chr23:889294-889022 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-593 |
| Cow position: | chr23:856454-856170 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 315-622 |
| Cow position: | chr23:813810-813491 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-639 |
| Cow position: | chr23:851948-851626 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 315-660 |
| Cow position: | chr23:876284-875932 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 331-639 |
| Cow position: | chr23:876493-876172 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 331-639 |
| Cow position: | chr23:882385-882064 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 333-593 |
| Cow position: | chr23:838032-837769 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 333-637 |
| Cow position: | chr23:823487-823176 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 333-654 |
| Cow position: | chr23:837798-837470 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:813729-813409 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:823370-823036 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:851720-851386 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:856406-856072 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:859467-859133 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:865023-864692 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 333-660 |
| Cow position: | chr23:882158-881824 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 333-660 |
| Cow position: | chr23:889098-888767 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 334-593 |
| Cow position: | chr23:865052-864790 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 346-579 |
| Cow position: | chr23:801059-800817 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 186 |
| Conread position: | 352-633 |
| Cow position: | chr23:782022-782297 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 358-615 |
| Cow position: | chr23:781667-781907 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 245, 24 |
| Conread position: | 358-659 |
| Cow position: | chr23:788971-788666 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 111 |
| Conread position: | 359-637 |
| Cow position: | chr23:851811-851526 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 359-660 |
| Cow position: | chr23:801076-800765 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 173 |
| Conread position: | 363-638 |
| Cow position: | chr23:789053-788789 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 442-629 |
| Cow position: | chr23:789028-788828 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 102, 168 |
| Conread position: | 447-660 |
| Cow position: | chr23:785062-784830 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 139 |
Show alignments to all cow chromosomes.