Cow genome map


           Conread name:
           Ss1.1-rski0117_a13.5
        

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 47
               

               Conread position:
               315-464
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               315-555
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-555
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-581
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-581
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-581
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-593
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 81
               

               Conread position:
               315-622
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-639
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               315-660
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 81
               

               Conread position:
               331-639
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               331-639
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               333-593
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               333-637
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               333-654
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               333-660
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               334-593
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               346-579
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 186
               

               Conread position:
               352-633
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               358-615
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               245, 24
               

               Conread position:
               358-659
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 111
               

               Conread position:
               359-637
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               359-660
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 173
               

               Conread position:
               363-638
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               442-629
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               102, 168
               

               Conread position:
               447-660
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 139
               
Show alignments to all cow chromosomes.