Cow genome map


           Conread name:
           Ss1.1-rski0135_g24.5
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 40
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               153, 158
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               134, 121
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               137, 129
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 137
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               173, 212
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               160, 211
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               173, 219
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               172, 238
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               173, 212
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               180, 211
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               182, 174
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               171, 211
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 40
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               183, 212
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               174, 212
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               131, 110
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               172, 198
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 287
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               173, 198
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 121
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               173, 211
               

               Conread position:
               1-490
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               173, 212
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               183, 366
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 127
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 151
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-495
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-503
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               155, 148
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 122
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               492, 203
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 157
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               347
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 396
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               415, 133
               

               Conread position:
               2-171
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               2-194
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               2-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               2-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               172, 215
               

               Conread position:
               2-491
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               178, 173
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               301
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               104, 99
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               303
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               4-173
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               170, 242
               

               Conread position:
               4-318
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               168, 281
               

               Conread position:
               5-173
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               5-188
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               5-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               176, 216
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               169, 208
               

               Conread position:
               14-287
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               14-318
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               14-554
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 88
               

               Conread position:
               19-264
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 234
               

               Conread position:
               245-498
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               305-523
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               192, 68
               
Show alignments to all cow chromosomes.