Cow genome map
| Conread name: | Ss1.1-rski0135_g24.5 |
| Conread position: | 1-171 |
| Cow position: | chr25:33157135-33156965 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-171 |
| Cow position: | chr25:33299153-33299323 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 1-171 |
| Cow position: | chr25:36801713-36801883 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-171 |
| Cow position: | chr25:36801797-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-173 |
| Cow position: | chr25:36801545-36801717 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-194 |
| Cow position: | chr25:34447360-34447554 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 1-254 |
| Cow position: | chr25:33299489-33299743 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 1-259 |
| Cow position: | chr25:33127888-33128147 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 1-267 |
| Cow position: | chr25:34769534-34769267 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 1-287 |
| Cow position: | chr25:33298565-33298852 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 1-288 |
| Cow position: | chr25:33127804-33128092 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 1-292 |
| Cow position: | chr25:33305878-33305592 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 276, 56 |
| Conread position: | 1-437 |
| Cow position: | chr25:33298817-33299263 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 1-437 |
| Cow position: | chr25:36800885-36801331 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 174, 384 |
| Conread position: | 1-446 |
| Cow position: | chr25:34769786-34769331 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 172, 381 |
| Conread position: | 1-447 |
| Cow position: | chr25:33298481-33298937 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 1-487 |
| Cow position: | chr25:34770038-34769542 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 181, 320 |
| Conread position: | 2-172 |
| Cow position: | chr25:23420638-23420808 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-448 |
| Cow position: | chr25:34769869-34769413 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 172, 370 |
| Conread position: | 3-340 |
| Cow position: | chr25:33305958-33305628 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 5-255 |
| Cow position: | chr25:34447448-34447699 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 14-259 |
| Cow position: | chr25:34770109-34769863 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 20-318 |
| Cow position: | chr25:33127739-33128038 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 0 |
Show alignments to all cow chromosomes.