Cow genome map

Conread name: Ss1.1-rski0137_h16.5

Conread position: 620-807
Cow position: chr11:67614923-67614742 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 94

Conread position: 624-802
Cow position: chr11:80564296-80564475 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 98

Conread position: 628-807
Cow position: chr11:20238683-20238859 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 99

Conread position: 642-809
Cow position: chr11:42064204-42064039 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 57

Conread position: 642-810
Cow position: chr11:36847188-36847355 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 68

Conread position: 642-811
Cow position: chr11:13592756-13592926 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 96

Conread position: 642-816
Cow position: chr11:32126632-32126808 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 645-803
Cow position: chr11:17721778-17721622 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 77

Conread position: 645-803
Cow position: chr11:32782860-32782695 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 645-804
Cow position: chr11:33369174-33369332 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 56

Conread position: 645-805
Cow position: chr11:40608571-40608412 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 89

Conread position: 645-807
Cow position: chr11:18509007-18508845 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 91

Conread position: 645-807
Cow position: chr11:32254193-32254033 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 645-807
Cow position: chr11:42066888-42067047 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 645-807
Cow position: chr11:43914315-43914476 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 645-807
Cow position: chr11:46314034-46314196 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 89

Conread position: 645-807
Cow position: chr11:47784798-47784963 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 645-807
Cow position: chr11:53778640-53778803 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 645-807
Cow position: chr11:60296753-60296921 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 100

Conread position: 645-807
Cow position: chr11:63999068-63998907 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 69

Conread position: 645-807
Cow position: chr11:80008044-80007879 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 55

Conread position: 645-808
Cow position: chr11:36182718-36182875 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 74

Conread position: 645-810
Cow position: chr11:26442481-26442317 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 91

Conread position: 645-810
Cow position: chr11:62889870-62889705 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 56

Conread position: 645-811
Cow position: chr11:4621407-4621248 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 69

Conread position: 645-811
Cow position: chr11:68913164-68913330 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 92

Conread position: 645-811
Cow position: chr11:79666238-79666075 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 68

Conread position: 645-813
Cow position: chr11:12555282-12555115 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 59

Conread position: 645-814
Cow position: chr11:1980244-1980075 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 61

Conread position: 645-814
Cow position: chr11:2084167-2084335 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 83

Conread position: 645-814
Cow position: chr11:5176353-5176190 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 59

Conread position: 645-814
Cow position: chr11:5201628-5201456 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 137

Conread position: 645-814
Cow position: chr11:6245338-6245511 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 645-814
Cow position: chr11:15772690-15772524 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 72

Conread position: 645-814
Cow position: chr11:38226266-38226433 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 645-814
Cow position: chr11:68570357-68570192 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 56

Conread position: 645-815
Cow position: chr11:34644678-34644848 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 71

Conread position: 646-807
Cow position: chr11:2900696-2900530 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 646-811
Cow position: chr11:21830185-21830024 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 85

Conread position: 647-803
Cow position: chr11:25620365-25620211 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 54

Conread position: 647-807
Cow position: chr11:37100147-37099989 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 85

Conread position: 647-807
Cow position: chr11:42016614-42016456 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 86

Conread position: 647-810
Cow position: chr11:78381039-78380883 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 66

Conread position: 647-811
Cow position: chr11:5559307-5559470 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 89

Conread position: 647-812
Cow position: chr11:86895402-86895560 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 66

Conread position: 647-813
Cow position: chr11:41986020-41985859 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 67

Conread position: 647-814
Cow position: chr11:36361617-36361451 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 67

Conread position: 648-807
Cow position: chr11:42206448-42206599 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 648-807
Cow position: chr11:50152787-50152630 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 648-807
Cow position: chr11:62789157-62789310 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 648-810
Cow position: chr11:21885860-21886016 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 648-816
Cow position: chr11:15382476-15382303 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 649-803
Cow position: chr11:30485679-30485836 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 649-814
Cow position: chr11:41213076-41213242 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 75

Conread position: 650-814
Cow position: chr11:41278214-41278377 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 51

Conread position: 650-816
Cow position: chr11:66188288-66188129 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 32

Conread position: 652-806
Cow position: chr11:25119901-25119754 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 652-807
Cow position: chr11:30986669-30986819 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 62

Conread position: 652-810
Cow position: chr11:44016274-44016431 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 84

Conread position: 652-814
Cow position: chr11:62620407-62620565 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 62

Conread position: 653-807
Cow position: chr11:35352009-35351850 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 653-807
Cow position: chr11:65157376-65157222 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 78

Conread position: 653-814
Cow position: chr11:26057619-26057457 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 653-814
Cow position: chr11:87172045-87171887 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 59

Conread position: 655-795
Cow position: chr11:34144891-34144748 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 655-807
Cow position: chr11:12768432-12768579 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 656-814
Cow position: chr11:33271465-33271619 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 59

Show alignments to all cow chromosomes.