Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 623-807 |
| Cow position: | chr12:14986730-14986908 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 644-815 |
| Cow position: | chr12:42749439-42749612 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 645-802 |
| Cow position: | chr12:29762247-29762087 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-803 |
| Cow position: | chr12:25814156-25814314 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 645-806 |
| Cow position: | chr12:4014430-4014262 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 645-807 |
| Cow position: | chr12:3454697-3454858 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 130 |
| Conread position: | 645-807 |
| Cow position: | chr12:9482302-9482141 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 645-807 |
| Cow position: | chr12:26749949-26749789 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 645-807 |
| Cow position: | chr12:35241102-35240942 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 645-807 |
| Cow position: | chr12:43619283-43619444 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 645-807 |
| Cow position: | chr12:43974292-43974453 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 645-814 |
| Cow position: | chr12:19261198-19261363 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 645-814 |
| Cow position: | chr12:29731317-29731479 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-814 |
| Cow position: | chr12:43551219-43551048 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 645-816 |
| Cow position: | chr12:34877833-34878007 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 646-810 |
| Cow position: | chr12:10942291-10942458 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 646-813 |
| Cow position: | chr12:15050619-15050458 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 646-814 |
| Cow position: | chr12:38774239-38774077 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 647-807 |
| Cow position: | chr12:42602238-42602076 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 647-810 |
| Cow position: | chr12:22047926-22048088 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 647-814 |
| Cow position: | chr12:6188109-6187941 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 647-814 |
| Cow position: | chr12:10827790-10827954 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 648-806 |
| Cow position: | chr12:3057093-3057249 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 648-807 |
| Cow position: | chr12:44622354-44622521 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 649-807 |
| Cow position: | chr12:2835410-2835566 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 652-807 |
| Cow position: | chr12:7884671-7884519 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 652-814 |
| Cow position: | chr12:13995788-13995626 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 654-813 |
| Cow position: | chr12:583498-583337 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 655-810 |
| Cow position: | chr12:27663980-27663826 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 81 |
Show alignments to all cow chromosomes.