Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 605-811 |
| Cow position: | chr14:11643209-11643407 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 615-813 |
| Cow position: | chr14:36559195-36559389 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 617-807 |
| Cow position: | chr14:19774192-19774374 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 622-812 |
| Cow position: | chr14:22989058-22988873 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 622-814 |
| Cow position: | chr14:48838619-48838427 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 114 |
| Conread position: | 641-814 |
| Cow position: | chr14:15518395-15518567 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 642-807 |
| Cow position: | chr14:10937677-10937513 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 102 |
| Conread position: | 642-810 |
| Cow position: | chr14:11079456-11079295 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 642-810 |
| Cow position: | chr14:40107111-40107272 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 642-811 |
| Cow position: | chr14:19832389-19832554 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 642-814 |
| Cow position: | chr14:145507-145675 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 132, 91 |
| Conread position: | 642-814 |
| Cow position: | chr14:26116066-26115895 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 643-810 |
| Cow position: | chr14:28304780-28304947 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 645-793 |
| Cow position: | chr14:27848186-27848036 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 645-803 |
| Cow position: | chr14:25903532-25903379 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 645-804 |
| Cow position: | chr14:11470147-11470304 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 645-806 |
| Cow position: | chr14:18941285-18941443 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 645-807 |
| Cow position: | chr14:7271249-7271415 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 645-807 |
| Cow position: | chr14:20640628-20640786 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 645-807 |
| Cow position: | chr14:27653165-27653004 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 645-807 |
| Cow position: | chr14:36443017-36443174 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 645-809 |
| Cow position: | chr14:50362795-50362633 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 645-810 |
| Cow position: | chr14:8027559-8027727 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-811 |
| Cow position: | chr14:10609681-10609518 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 645-812 |
| Cow position: | chr14:20914976-20915143 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 645-813 |
| Cow position: | chr14:5668117-5668285 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 645-813 |
| Cow position: | chr14:21357559-21357394 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 645-813 |
| Cow position: | chr14:29965020-29964854 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 645-814 |
| Cow position: | chr14:8949651-8949486 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 68 |
| Conread position: | 645-814 |
| Cow position: | chr14:13385369-13385202 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-814 |
| Cow position: | chr14:15428479-15428315 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 645-814 |
| Cow position: | chr14:18270362-18270196 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-814 |
| Cow position: | chr14:27364581-27364413 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 645-814 |
| Cow position: | chr14:30023196-30023364 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 645-814 |
| Cow position: | chr14:49817684-49817849 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-815 |
| Cow position: | chr14:31342213-31342046 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 645-816 |
| Cow position: | chr14:10706877-10706712 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 166, 68 |
| Conread position: | 645-816 |
| Cow position: | chr14:15469980-15470152 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 647-806 |
| Cow position: | chr14:1708657-1708815 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 647-807 |
| Cow position: | chr14:26655135-26655294 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 647-814 |
| Cow position: | chr14:7198497-7198331 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 647-814 |
| Cow position: | chr14:21593004-21593165 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 648-806 |
| Cow position: | chr14:11604880-11604728 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 648-807 |
| Cow position: | chr14:10078266-10078097 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 648-807 |
| Cow position: | chr14:21530075-21530240 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 648-807 |
| Cow position: | chr14:24746464-24746299 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 648-807 |
| Cow position: | chr14:47224367-47224529 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 648-808 |
| Cow position: | chr14:36151323-36151166 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 648-814 |
| Cow position: | chr14:20110724-20110886 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 648-814 |
| Cow position: | chr14:32784117-32784282 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 649-803 |
| Cow position: | chr14:2853147-2852997 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 649-811 |
| Cow position: | chr14:38747675-38747518 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 652-811 |
| Cow position: | chr14:12071530-12071688 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 653-814 |
| Cow position: | chr14:19321514-19321674 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 88 |
Show alignments to all cow chromosomes.