Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 622-807 |
| Cow position: | chr22:1304537-1304359 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 5 |
| Conread position: | 622-807 |
| Cow position: | chr22:3250979-3250784 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 622-814 |
| Cow position: | chr22:26188885-26189075 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 622-814 |
| Cow position: | chr22:30818228-30818412 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 628-802 |
| Cow position: | chr22:4163999-4164170 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 86 |
| Conread position: | 628-803 |
| Cow position: | chr22:1523239-1523414 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 33 |
| Conread position: | 628-807 |
| Cow position: | chr22:11613445-11613622 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 107 |
| Conread position: | 642-807 |
| Cow position: | chr22:4132610-4132773 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 642-810 |
| Cow position: | chr22:7497075-7496908 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 642-811 |
| Cow position: | chr22:8418496-8418664 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 642-811 |
| Cow position: | chr22:33373274-33373443 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 644-807 |
| Cow position: | chr22:10594645-10594806 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 644-814 |
| Cow position: | chr22:22860875-22860708 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 645-793 |
| Cow position: | chr22:14378658-14378510 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 645-793 |
| Cow position: | chr22:28146714-28146864 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-805 |
| Cow position: | chr22:11790021-11790180 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 645-806 |
| Cow position: | chr22:12902817-12902661 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr22:12188443-12188278 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 645-807 |
| Cow position: | chr22:12195530-12195364 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 645-807 |
| Cow position: | chr22:17852598-17852442 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 645-807 |
| Cow position: | chr22:24134288-24134127 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr22:39215577-39215416 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-811 |
| Cow position: | chr22:6709753-6709590 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 645-811 |
| Cow position: | chr22:12829571-12829409 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 154, 57 |
| Conread position: | 645-811 |
| Cow position: | chr22:33030836-33031009 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-812 |
| Cow position: | chr22:1991637-1991804 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 141, 53 |
| Conread position: | 645-813 |
| Cow position: | chr22:1074302-1074469 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 645-814 |
| Cow position: | chr22:1106105-1106273 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 645-814 |
| Cow position: | chr22:2632884-2633051 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 645-814 |
| Cow position: | chr22:2704336-2704502 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 645-814 |
| Cow position: | chr22:2876760-2876594 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 645-814 |
| Cow position: | chr22:4736061-4736229 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-814 |
| Cow position: | chr22:6754229-6754061 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 645-814 |
| Cow position: | chr22:8883049-8883213 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-814 |
| Cow position: | chr22:10339081-10338902 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 645-814 |
| Cow position: | chr22:11497532-11497700 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 645-814 |
| Cow position: | chr22:12637638-12637804 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 645-814 |
| Cow position: | chr22:15490692-15490858 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 645-814 |
| Cow position: | chr22:25809238-25809078 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 645-814 |
| Cow position: | chr22:27681759-27681928 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 645-814 |
| Cow position: | chr22:35627386-35627554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 645-814 |
| Cow position: | chr22:39602320-39602488 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 645-814 |
| Cow position: | chr22:47820476-47820642 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 645-816 |
| Cow position: | chr22:5595773-5595602 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 645-816 |
| Cow position: | chr22:13930318-13930484 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 645-816 |
| Cow position: | chr22:23209602-23209772 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 646-796 |
| Cow position: | chr22:12389138-12389287 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 646-807 |
| Cow position: | chr22:6852545-6852385 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 646-811 |
| Cow position: | chr22:30615769-30615931 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 646-814 |
| Cow position: | chr22:11767011-11766845 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 646-814 |
| Cow position: | chr22:27577779-27577947 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 646-814 |
| Cow position: | chr22:39446330-39446497 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 647-797 |
| Cow position: | chr22:1046152-1046002 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 647-807 |
| Cow position: | chr22:23372824-23372663 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 647-807 |
| Cow position: | chr22:33448041-33447882 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 647-810 |
| Cow position: | chr22:37702018-37702173 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 647-814 |
| Cow position: | chr22:9075447-9075614 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 647-814 |
| Cow position: | chr22:9372561-9372729 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 647-814 |
| Cow position: | chr22:19305938-19306104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 648-803 |
| Cow position: | chr22:39507999-39507848 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 648-807 |
| Cow position: | chr22:16813839-16813991 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 648-814 |
| Cow position: | chr22:6176245-6176079 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 649-805 |
| Cow position: | chr22:16639346-16639502 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 649-807 |
| Cow position: | chr22:3486736-3486567 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 649-810 |
| Cow position: | chr22:12673293-12673133 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 649-811 |
| Cow position: | chr22:16533116-16533272 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 649-814 |
| Cow position: | chr22:17652477-17652635 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 652-810 |
| Cow position: | chr22:16541607-16541450 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 652-814 |
| Cow position: | chr22:1776104-1776266 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 652-814 |
| Cow position: | chr22:4156772-4156613 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 656-809 |
| Cow position: | chr22:31870208-31870057 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 666-807 |
| Cow position: | chr22:29546698-29546833 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.