Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 610-805 |
| Cow position: | chr23:1877887-1877697 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 105 |
| Conread position: | 612-807 |
| Cow position: | chr23:16744558-16744745 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 621-807 |
| Cow position: | chr23:24718782-24718601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 93 |
| Conread position: | 622-806 |
| Cow position: | chr23:27849017-27849194 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 622-807 |
| Cow position: | chr23:40501077-40500894 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 182, 102 |
| Conread position: | 623-807 |
| Cow position: | chr23:5426455-5426639 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 623-811 |
| Cow position: | chr23:33232680-33232495 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 623-816 |
| Cow position: | chr23:1194470-1194284 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 635-807 |
| Cow position: | chr23:35656441-35656611 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 641-807 |
| Cow position: | chr23:39108972-39109137 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 642-810 |
| Cow position: | chr23:29330348-29330515 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 95 |
| Conread position: | 645-797 |
| Cow position: | chr23:32479974-32479825 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 645-807 |
| Cow position: | chr23:2395554-2395396 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 645-807 |
| Cow position: | chr23:4291398-4291559 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 645-807 |
| Cow position: | chr23:4521841-4521679 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 645-807 |
| Cow position: | chr23:5617617-5617777 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 80 |
| Conread position: | 645-807 |
| Cow position: | chr23:9726498-9726337 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr23:24685288-24685442 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 645-811 |
| Cow position: | chr23:13410712-13410555 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 645-811 |
| Cow position: | chr23:18739421-18739253 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 69 |
| Conread position: | 645-811 |
| Cow position: | chr23:40348601-40348440 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 645-813 |
| Cow position: | chr23:164803-164962 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 645-814 |
| Cow position: | chr23:307499-307667 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-814 |
| Cow position: | chr23:1655938-1656103 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 645-814 |
| Cow position: | chr23:4416244-4416076 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 645-814 |
| Cow position: | chr23:5436959-5436792 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 645-814 |
| Cow position: | chr23:19739522-19739353 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 645-814 |
| Cow position: | chr23:20744549-20744374 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 645-814 |
| Cow position: | chr23:26986227-26986064 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 645-814 |
| Cow position: | chr23:35239395-35239559 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 645-814 |
| Cow position: | chr23:35527123-35527290 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 645-814 |
| Cow position: | chr23:40737975-40737805 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 645-815 |
| Cow position: | chr23:5436599-5436430 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 646-807 |
| Cow position: | chr23:10888319-10888470 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 646-814 |
| Cow position: | chr23:27526629-27526794 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 648-806 |
| Cow position: | chr23:12363571-12363418 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 648-807 |
| Cow position: | chr23:8698467-8698627 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 648-807 |
| Cow position: | chr23:23104441-23104288 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 648-810 |
| Cow position: | chr23:809552-809712 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 648-814 |
| Cow position: | chr23:39778448-39778606 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 652-807 |
| Cow position: | chr23:39813550-39813704 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 652-810 |
| Cow position: | chr23:3270349-3270504 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 652-810 |
| Cow position: | chr23:6672585-6672423 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 652-814 |
| Cow position: | chr23:16664351-16664194 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 653-797 |
| Cow position: | chr23:26975413-26975275 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 653-810 |
| Cow position: | chr23:24809385-24809232 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 655-807 |
| Cow position: | chr23:534281-534428 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 51, 59 |
| Conread position: | 658-801 |
| Cow position: | chr23:4504868-4505008 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 658-814 |
| Cow position: | chr23:3890518-3890363 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 666-807 |
| Cow position: | chr23:4090479-4090623 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.