Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 | 
| Conread position: | 622-805 | 
| Cow position: | chr3:79196753-79196936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 76, 101 | 
| Conread position: | 622-811 | 
| Cow position: | chr3:23132175-23131989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 84, 100 | 
| Conread position: | 623-815 | 
| Cow position: | chr3:55189759-55189567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 30, 122 | 
| Conread position: | 638-806 | 
| Cow position: | chr3:68156732-68156901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 19, 102 | 
| Conread position: | 641-807 | 
| Cow position: | chr3:22868707-22868541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 19, 84 | 
| Conread position: | 641-811 | 
| Cow position: | chr3:78258742-78258571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 641-814 | 
| Cow position: | chr3:72342258-72342430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 65, 96 | 
| Conread position: | 642-807 | 
| Cow position: | chr3:2392955-2392794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 26, 47 | 
| Conread position: | 642-814 | 
| Cow position: | chr3:53604732-53604562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 67, 95 | 
| Conread position: | 644-807 | 
| Cow position: | chr3:3556561-3556723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 48, 57 | 
| Conread position: | 644-807 | 
| Cow position: | chr3:8523138-8522979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 62, 50 | 
| Conread position: | 645-797 | 
| Cow position: | chr3:47417555-47417406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 61, 86 | 
| Conread position: | 645-805 | 
| Cow position: | chr3:54506724-54506879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 61, 69 | 
| Conread position: | 645-806 | 
| Cow position: | chr3:74515321-74515162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 61, 82 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:562777-562614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 45, 109 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:15443712-15443551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 56, 91 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:21694241-21694402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 58, 68 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:45881915-45882074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 62, 72 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:48900316-48900155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 61, 69 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:55177729-55177576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 61, 74 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:66885013-66884855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 62, 70 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:75966767-75966607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 50, 75 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:76168615-76168454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 61, 92 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:76267958-76267798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 58, 69 | 
| Conread position: | 645-807 | 
| Cow position: | chr3:83474762-83474929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 645-810 | 
| Cow position: | chr3:11281783-11281947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 645-811 | 
| Cow position: | chr3:3453596-3453762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 61, 72 | 
| Conread position: | 645-811 | 
| Cow position: | chr3:4931824-4931651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 645-811 | 
| Cow position: | chr3:25702325-25702152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 645-811 | 
| Cow position: | chr3:25735889-25735724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 645-811 | 
| Cow position: | chr3:29234664-29234499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 48, 56 | 
| Conread position: | 645-813 | 
| Cow position: | chr3:22676093-22675926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:2675046-2675215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 61, 91 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:3656531-3656697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 48, 85 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:7381816-7381650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 56, 69 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:18700094-18699926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 48, 56 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:22165399-22165232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 24, 20 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:31309337-31309172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 59, 91 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:34871584-34871749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 56, 26 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:44782356-44782520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:55318880-55318716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:55730452-55730284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 61, 69 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:59317719-59317882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:60370999-60371166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 45, 56 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:64910079-64909913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 58, 90 | 
| Conread position: | 645-814 | 
| Cow position: | chr3:76056268-76056107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 61, 69 | 
| Conread position: | 645-816 | 
| Cow position: | chr3:63069349-63069178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 48, 56 | 
| Conread position: | 646-807 | 
| Cow position: | chr3:23037491-23037333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 68, 90 | 
| Conread position: | 646-807 | 
| Cow position: | chr3:49787576-49787731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 47, 55 | 
| Conread position: | 646-807 | 
| Cow position: | chr3:58929517-58929357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 79, 90 | 
| Conread position: | 646-807 | 
| Cow position: | chr3:59681886-59681732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 60, 71 | 
| Conread position: | 646-810 | 
| Cow position: | chr3:35055956-35055798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 66, 42 | 
| Conread position: | 646-814 | 
| Cow position: | chr3:15153709-15153870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 57, 67 | 
| Conread position: | 646-814 | 
| Cow position: | chr3:47199109-47198944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 57, 67 | 
| Conread position: | 646-816 | 
| Cow position: | chr3:62186169-62186342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 647-792 | 
| Cow position: | chr3:23203212-23203069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 56, 29 | 
| Conread position: | 647-807 | 
| Cow position: | chr3:1011505-1011667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 9, 92 | 
| Conread position: | 647-807 | 
| Cow position: | chr3:45314363-45314527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 49, 41 | 
| Conread position: | 647-807 | 
| Cow position: | chr3:68303333-68303493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 56, 66 | 
| Conread position: | 647-810 | 
| Cow position: | chr3:9663153-9662991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 58, 89 | 
| Conread position: | 647-810 | 
| Cow position: | chr3:12090692-12090855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 647-811 | 
| Cow position: | chr3:62789936-62789770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 647-811 | 
| Cow position: | chr3:68648193-68648356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 45, 53 | 
| Conread position: | 647-812 | 
| Cow position: | chr3:621453-621621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 647-812 | 
| Cow position: | chr3:23920410-23920246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 58, 79 | 
| Conread position: | 647-812 | 
| Cow position: | chr3:37641345-37641506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 59, 64 | 
| Conread position: | 647-813 | 
| Cow position: | chr3:4071752-4071588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 58, 32 | 
| Conread position: | 647-814 | 
| Cow position: | chr3:986033-986197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 69, 52 | 
| Conread position: | 647-814 | 
| Cow position: | chr3:57577716-57577878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 56, 41 | 
| Conread position: | 647-814 | 
| Cow position: | chr3:59947684-59947850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 58, 89 | 
| Conread position: | 647-814 | 
| Cow position: | chr3:80958492-80958328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 647-815 | 
| Cow position: | chr3:18479279-18479113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 46, 32 | 
| Conread position: | 647-815 | 
| Cow position: | chr3:79271692-79271526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 77, 72 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:2636969-2637120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 58, 66 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:41510596-41510753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 25, 62 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:59604863-59605017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 58, 73 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:59610698-59610544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 56, 69 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:75107794-75107947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 58, 65 | 
| Conread position: | 648-807 | 
| Cow position: | chr3:77098803-77098649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 50, 66 | 
| Conread position: | 648-811 | 
| Cow position: | chr3:26393280-26393120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 58 | 
| Conread position: | 648-811 | 
| Cow position: | chr3:49996701-49996538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 58, 86 | 
| Conread position: | 648-814 | 
| Cow position: | chr3:71231415-71231580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 63, 88 | 
| Conread position: | 649-807 | 
| Cow position: | chr3:22078096-22078253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 57, 65 | 
| Conread position: | 649-807 | 
| Cow position: | chr3:61024002-61023846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 57, 65 | 
| Conread position: | 652-814 | 
| Cow position: | chr3:44218789-44218950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 54, 62 | 
| Conread position: | 652-814 | 
| Cow position: | chr3:49363133-49363290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 52, 68 | 
| Conread position: | 652-814 | 
| Cow position: | chr3:74127485-74127318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 44, 36 | 
| Conread position: | 653-810 | 
| Cow position: | chr3:43389103-43388947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 52, 83 | 
| Conread position: | 654-807 | 
| Cow position: | chr3:67407340-67407192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 52, 60 | 
| Conread position: | 655-807 | 
| Cow position: | chr3:19682724-19682881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 657-807 | 
| Cow position: | chr3:27274557-27274702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 49, 58 | 
Show alignments to all cow chromosomes.
