Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 622-807 |
| Cow position: | chr7:6469681-6469867 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 622-814 |
| Cow position: | chr7:47513624-47513439 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 623-803 |
| Cow position: | chr7:8658576-8658751 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 623-814 |
| Cow position: | chr7:42335387-42335568 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 628-805 |
| Cow position: | chr7:31523611-31523785 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 86 |
| Conread position: | 642-805 |
| Cow position: | chr7:62603257-62603421 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 642-810 |
| Cow position: | chr7:8888372-8888539 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 642-810 |
| Cow position: | chr7:11444066-11444233 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 644-807 |
| Cow position: | chr7:66748457-66748291 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 644-814 |
| Cow position: | chr7:38347766-38347598 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 644-814 |
| Cow position: | chr7:49068759-49068590 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 644-815 |
| Cow position: | chr7:28109662-28109831 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 645-796 |
| Cow position: | chr7:48616292-48616138 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 645-802 |
| Cow position: | chr7:44094638-44094477 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 645-803 |
| Cow position: | chr7:10441885-10441732 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 645-803 |
| Cow position: | chr7:48721820-48721668 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 645-804 |
| Cow position: | chr7:9068517-9068357 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 645-804 |
| Cow position: | chr7:37394381-37394537 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-805 |
| Cow position: | chr7:36534107-36534265 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 645-807 |
| Cow position: | chr7:249422-249264 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 645-807 |
| Cow position: | chr7:12330143-12329985 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr7:17000809-17000970 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 645-807 |
| Cow position: | chr7:17750759-17750600 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr7:23671835-23671994 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 645-807 |
| Cow position: | chr7:25415477-25415638 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 645-807 |
| Cow position: | chr7:26309586-26309425 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 645-807 |
| Cow position: | chr7:27290416-27290255 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 645-807 |
| Cow position: | chr7:36665408-36665568 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 645-807 |
| Cow position: | chr7:38458458-38458626 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-807 |
| Cow position: | chr7:39415993-39416147 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 645-807 |
| Cow position: | chr7:41315353-41315184 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-807 |
| Cow position: | chr7:44942640-44942797 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 645-807 |
| Cow position: | chr7:54712504-54712657 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 645-810 |
| Cow position: | chr7:31885676-31885839 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 645-811 |
| Cow position: | chr7:23609460-23609626 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 645-811 |
| Cow position: | chr7:37651579-37651745 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 645-814 |
| Cow position: | chr7:5914314-5914476 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 645-814 |
| Cow position: | chr7:9077727-9077560 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 645-814 |
| Cow position: | chr7:11784961-11784795 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 645-814 |
| Cow position: | chr7:13606536-13606707 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 645-814 |
| Cow position: | chr7:17782610-17782444 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 645-814 |
| Cow position: | chr7:29479610-29479768 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-814 |
| Cow position: | chr7:34216292-34216450 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 645-814 |
| Cow position: | chr7:39093843-39093675 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 645-814 |
| Cow position: | chr7:49942048-49941884 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 645-814 |
| Cow position: | chr7:51685097-51685262 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 645-815 |
| Cow position: | chr7:37697888-37698057 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 646-806 |
| Cow position: | chr7:13067241-13067400 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 646-806 |
| Cow position: | chr7:25263452-25263610 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 646-814 |
| Cow position: | chr7:54054672-54054845 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 647-806 |
| Cow position: | chr7:19797844-19797686 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 647-813 |
| Cow position: | chr7:8523695-8523535 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 647-813 |
| Cow position: | chr7:8809890-8810055 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 647-814 |
| Cow position: | chr7:63300281-63300447 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 647-816 |
| Cow position: | chr7:53834506-53834339 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 648-807 |
| Cow position: | chr7:12918494-12918341 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 648-814 |
| Cow position: | chr7:26909676-26909517 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 648-814 |
| Cow position: | chr7:48553030-48552860 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 649-807 |
| Cow position: | chr7:15570125-15570278 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 649-807 |
| Cow position: | chr7:35088744-35088901 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 649-810 |
| Cow position: | chr7:53791504-53791350 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 651-796 |
| Cow position: | chr7:35651641-35651496 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 653-811 |
| Cow position: | chr7:9128967-9128810 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 653-814 |
| Cow position: | chr7:30290854-30290696 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 655-811 |
| Cow position: | chr7:21174906-21175068 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 662-816 |
| Cow position: | chr7:7462019-7461867 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 52 |
Show alignments to all cow chromosomes.