Cow genome map
| Conread name: | Ss1.1-rski0137_h16.5 |
| Conread position: | 622-807 |
| Cow position: | chr8:50682131-50682312 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 622-814 |
| Cow position: | chr8:34820289-34820098 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 623-803 |
| Cow position: | chr8:24905495-24905684 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 623-808 |
| Cow position: | chr8:49305720-49305537 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 628-807 |
| Cow position: | chr8:5437800-5437971 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 93 |
| Conread position: | 629-814 |
| Cow position: | chr8:2375985-2375801 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 107 |
| Conread position: | 642-796 |
| Cow position: | chr8:3423053-3423205 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 642-810 |
| Cow position: | chr8:38643460-38643295 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 642-811 |
| Cow position: | chr8:55454715-55454876 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 644-808 |
| Cow position: | chr8:35817068-35816905 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 644-810 |
| Cow position: | chr8:5665643-5665475 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 644-810 |
| Cow position: | chr8:28383036-28382871 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 645-797 |
| Cow position: | chr8:8097215-8097065 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 645-803 |
| Cow position: | chr8:13922690-13922845 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 645-804 |
| Cow position: | chr8:16144182-16144340 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 645-804 |
| Cow position: | chr8:45167581-45167423 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 96 |
| Conread position: | 645-805 |
| Cow position: | chr8:38572217-38572062 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 645-807 |
| Cow position: | chr8:5468039-5467873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-807 |
| Cow position: | chr8:26625920-26626081 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-807 |
| Cow position: | chr8:47169996-47170155 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-807 |
| Cow position: | chr8:54306406-54306563 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 645-807 |
| Cow position: | chr8:55885025-55885182 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 645-809 |
| Cow position: | chr8:19784910-19785071 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 159, 89 |
| Conread position: | 645-809 |
| Cow position: | chr8:31767983-31767824 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 645-810 |
| Cow position: | chr8:11124514-11124353 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 645-810 |
| Cow position: | chr8:37148362-37148526 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 645-810 |
| Cow position: | chr8:37571652-37571490 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 645-810 |
| Cow position: | chr8:60746692-60746857 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 645-811 |
| Cow position: | chr8:1024011-1024174 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 645-811 |
| Cow position: | chr8:3914643-3914812 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 645-811 |
| Cow position: | chr8:20107739-20107580 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 645-811 |
| Cow position: | chr8:37292038-37291872 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 645-811 |
| Cow position: | chr8:50281928-50282095 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 645-813 |
| Cow position: | chr8:8767086-8766917 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 99 |
| Conread position: | 645-814 |
| Cow position: | chr8:10832382-10832212 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 645-814 |
| Cow position: | chr8:15426796-15426967 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 645-814 |
| Cow position: | chr8:20783212-20783045 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 645-814 |
| Cow position: | chr8:21600498-21600670 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 645-814 |
| Cow position: | chr8:27138743-27138581 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 645-814 |
| Cow position: | chr8:32303980-32304155 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 171 |
| Conread position: | 645-814 |
| Cow position: | chr8:37298529-37298695 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 645-814 |
| Cow position: | chr8:38860613-38860788 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 645-815 |
| Cow position: | chr8:20897397-20897566 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 645-815 |
| Cow position: | chr8:45859860-45860030 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 646-814 |
| Cow position: | chr8:28378714-28378548 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 91 |
| Conread position: | 646-814 |
| Cow position: | chr8:48182555-48182721 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 647-807 |
| Cow position: | chr8:34556218-34556377 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 647-810 |
| Cow position: | chr8:20105820-20105658 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 647-810 |
| Cow position: | chr8:26881774-26881614 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 647-811 |
| Cow position: | chr8:43052023-43052188 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 647-814 |
| Cow position: | chr8:19223605-19223444 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 647-814 |
| Cow position: | chr8:20926577-20926409 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 647-814 |
| Cow position: | chr8:28322024-28322190 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 647-814 |
| Cow position: | chr8:47057610-47057446 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 647-815 |
| Cow position: | chr8:17199378-17199212 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 648-802 |
| Cow position: | chr8:20617335-20617491 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 648-811 |
| Cow position: | chr8:51501231-51501073 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 648-814 |
| Cow position: | chr8:1303961-1304124 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 648-816 |
| Cow position: | chr8:39358056-39357885 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 649-810 |
| Cow position: | chr8:19642524-19642680 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 649-814 |
| Cow position: | chr8:8773022-8772857 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 649-814 |
| Cow position: | chr8:24363583-24363420 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 89 |
| Conread position: | 649-814 |
| Cow position: | chr8:39475587-39475757 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 652-807 |
| Cow position: | chr8:22273919-22274073 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 652-807 |
| Cow position: | chr8:26305807-26305653 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 652-807 |
| Cow position: | chr8:40280741-40280897 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 652-816 |
| Cow position: | chr8:61848668-61848509 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 655-810 |
| Cow position: | chr8:27731099-27731253 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 655-813 |
| Cow position: | chr8:32332412-32332255 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 655-814 |
| Cow position: | chr8:37635932-37635779 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 59 |
| Conread position: | 657-814 |
| Cow position: | chr8:25554765-25554610 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 667-807 |
| Cow position: | chr8:10194138-10194277 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 70 |
Show alignments to all cow chromosomes.