Cow genome map

Conread name: Ss1.1-rski0137_h16.5

Conread position: 622-806
Cow position: chr9:34286810-34286629 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 92

Conread position: 628-807
Cow position: chr9:34024704-34024529 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 85

Conread position: 633-793
Cow position: chr9:11199937-11200096 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 642-810
Cow position: chr9:19656985-19657147 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 82

Conread position: 642-811
Cow position: chr9:41470107-41470275 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 99

Conread position: 642-814
Cow position: chr9:15215696-15215866 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 59

Conread position: 643-797
Cow position: chr9:14357405-14357252 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 93

Conread position: 643-807
Cow position: chr9:48016970-48016819 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 644-807
Cow position: chr9:12786484-12786646 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 70

Conread position: 644-816
Cow position: chr9:9459973-9459810 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 645-793
Cow position: chr9:30402437-30402585 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 57

Conread position: 645-796
Cow position: chr9:37955183-37955333 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 645-803
Cow position: chr9:36490911-36491070 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 72

Conread position: 645-803
Cow position: chr9:41283003-41282846 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 69

Conread position: 645-803
Cow position: chr9:60741196-60741349 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 55

Conread position: 645-807
Cow position: chr9:13169675-13169835 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 645-807
Cow position: chr9:19067771-19067599 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 38

Conread position: 645-807
Cow position: chr9:23840406-23840575 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 645-807
Cow position: chr9:23955992-23956147 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 69

Conread position: 645-807
Cow position: chr9:24887194-24887035 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 75

Conread position: 645-807
Cow position: chr9:26279181-26279343 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 68

Conread position: 645-807
Cow position: chr9:28747532-28747688 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 69

Conread position: 645-807
Cow position: chr9:33114334-33114169 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 645-807
Cow position: chr9:35932826-35932984 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 76

Conread position: 645-807
Cow position: chr9:47214557-47214720 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 92

Conread position: 645-807
Cow position: chr9:51620433-51620274 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 75

Conread position: 645-810
Cow position: chr9:28315417-28315251 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 56

Conread position: 645-810
Cow position: chr9:28773127-28772968 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 69

Conread position: 645-810
Cow position: chr9:61022611-61022446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 156, 65

Conread position: 645-811
Cow position: chr9:31344619-31344784 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 69

Conread position: 645-811
Cow position: chr9:60395060-60395223 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 72

Conread position: 645-814
Cow position: chr9:9091117-9091284 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 91

Conread position: 645-814
Cow position: chr9:17769306-17769145 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 69

Conread position: 645-814
Cow position: chr9:21460163-21460331 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 69

Conread position: 645-814
Cow position: chr9:34423609-34423442 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 68

Conread position: 645-814
Cow position: chr9:34760376-34760542 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 79

Conread position: 645-814
Cow position: chr9:36457987-36457819 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 68

Conread position: 645-814
Cow position: chr9:55013344-55013518 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 8

Conread position: 645-816
Cow position: chr9:8645254-8645085 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 69

Conread position: 645-816
Cow position: chr9:61019374-61019544 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 88

Conread position: 646-811
Cow position: chr9:27345597-27345763 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 86

Conread position: 646-812
Cow position: chr9:33940592-33940422 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 149

Conread position: 646-814
Cow position: chr9:11447821-11447984 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 646-814
Cow position: chr9:13743943-13744111 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 67

Conread position: 646-814
Cow position: chr9:26477203-26477035 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 91

Conread position: 647-811
Cow position: chr9:52754864-52755026 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 67

Conread position: 647-814
Cow position: chr9:20828892-20828727 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 54

Conread position: 647-814
Cow position: chr9:35028179-35028345 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 67

Conread position: 648-803
Cow position: chr9:6192475-6192623 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 648-807
Cow position: chr9:33584700-33584854 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 65

Conread position: 648-809
Cow position: chr9:2037426-2037264 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 648-812
Cow position: chr9:40984490-40984329 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 69

Conread position: 649-807
Cow position: chr9:55256568-55256719 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 68

Conread position: 649-807
Cow position: chr9:59897577-59897426 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 65

Conread position: 649-816
Cow position: chr9:53323800-53323966 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 87

Conread position: 652-807
Cow position: chr9:30194992-30194841 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 69

Conread position: 653-811
Cow position: chr9:54598653-54598499 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 83

Conread position: 653-813
Cow position: chr9:44822344-44822498 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 61

Show alignments to all cow chromosomes.