Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 443-600 |
| Cow position: | chr10:38132987-38133149 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 443-618 |
| Cow position: | chr10:36945770-36945596 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 445-578 |
| Cow position: | chr10:4329965-4329830 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 445-581 |
| Cow position: | chr10:15383359-15383496 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-587 |
| Cow position: | chr10:54776578-54776718 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 445-590 |
| Cow position: | chr10:6489904-6490053 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 445-590 |
| Cow position: | chr10:28571431-28571577 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 445-590 |
| Cow position: | chr10:61509911-61509772 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 445-594 |
| Cow position: | chr10:19238849-19238700 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-597 |
| Cow position: | chr10:52152827-52152979 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 445-599 |
| Cow position: | chr10:5108823-5108668 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 445-599 |
| Cow position: | chr10:55122839-55122993 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 96 |
| Conread position: | 445-600 |
| Cow position: | chr10:34674050-34674199 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 445-600 |
| Cow position: | chr10:34705309-34705463 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 445-600 |
| Cow position: | chr10:41626627-41626777 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 445-600 |
| Cow position: | chr10:45871547-45871702 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 135 |
| Conread position: | 445-605 |
| Cow position: | chr10:38799870-38800030 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-607 |
| Cow position: | chr10:27136656-27136493 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-608 |
| Cow position: | chr10:13350177-13350015 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 115 |
| Conread position: | 445-608 |
| Cow position: | chr10:15602149-15601986 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-608 |
| Cow position: | chr10:16598721-16598884 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-609 |
| Cow position: | chr10:37014666-37014833 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 105 |
| Conread position: | 445-610 |
| Cow position: | chr10:6719006-6719176 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 445-610 |
| Cow position: | chr10:9959248-9959416 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 445-610 |
| Cow position: | chr10:36531697-36531528 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 445-610 |
| Cow position: | chr10:46934749-46934585 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 118, 151 |
| Conread position: | 445-613 |
| Cow position: | chr10:16830354-16830186 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 445-613 |
| Cow position: | chr10:49142475-49142307 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 445-616 |
| Cow position: | chr10:36856099-36855921 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 445-616 |
| Cow position: | chr10:39124165-39124333 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 446-590 |
| Cow position: | chr10:1978638-1978497 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 446-590 |
| Cow position: | chr10:22390630-22390772 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 446-596 |
| Cow position: | chr10:48316914-48316763 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 446-598 |
| Cow position: | chr10:19503250-19503097 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 446-618 |
| Cow position: | chr10:45371089-45371259 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 446-622 |
| Cow position: | chr10:60240186-60240013 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 447-600 |
| Cow position: | chr10:44730444-44730289 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 447-616 |
| Cow position: | chr10:28223247-28223421 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 449-600 |
| Cow position: | chr10:32440236-32440387 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 452-598 |
| Cow position: | chr10:35772765-35772618 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 457-598 |
| Cow position: | chr10:17518804-17518662 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 458-590 |
| Cow position: | chr10:25142492-25142361 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 476-599 |
| Cow position: | chr10:52364856-52364981 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 484-600 |
| Cow position: | chr10:5477094-5476975 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.