Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 442-610 |
| Cow position: | chr11:16314908-16315076 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 151 |
| Conread position: | 445-573 |
| Cow position: | chr11:62889855-62889726 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-576 |
| Cow position: | chr11:2835897-2836029 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr11:1625185-1625039 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 445-590 |
| Cow position: | chr11:12768437-12768579 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 445-593 |
| Cow position: | chr11:5328824-5328971 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 445-597 |
| Cow position: | chr11:2830695-2830846 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 445-598 |
| Cow position: | chr11:33369189-33369342 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 445-599 |
| Cow position: | chr11:5201613-5201454 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 445-599 |
| Cow position: | chr11:26823148-26823304 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-599 |
| Cow position: | chr11:62789169-62789321 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-600 |
| Cow position: | chr11:1980229-1980072 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-600 |
| Cow position: | chr11:36361604-36361448 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-600 |
| Cow position: | chr11:41278224-41278380 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr11:38657145-38656988 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 135 |
| Conread position: | 445-601 |
| Cow position: | chr11:63999053-63998893 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 445-608 |
| Cow position: | chr11:15772675-15772513 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-608 |
| Cow position: | chr11:63435559-63435723 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-610 |
| Cow position: | chr11:6320094-6319927 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-610 |
| Cow position: | chr11:21590424-21590593 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-610 |
| Cow position: | chr11:24551429-24551594 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 445-610 |
| Cow position: | chr11:25968816-25968651 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-610 |
| Cow position: | chr11:87172038-87171873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 83 |
| Conread position: | 445-611 |
| Cow position: | chr11:37435949-37435785 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 152, 67 |
| Conread position: | 445-611 |
| Cow position: | chr11:42066903-42067065 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 445-611 |
| Cow position: | chr11:63475634-63475471 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 445-611 |
| Cow position: | chr11:64781125-64781292 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-613 |
| Cow position: | chr11:62620415-62620582 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 445-614 |
| Cow position: | chr11:26057612-26057440 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-616 |
| Cow position: | chr11:33271469-33271636 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-623 |
| Cow position: | chr11:36847206-36847389 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 445-644 |
| Cow position: | chr11:7874177-7874379 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 446-590 |
| Cow position: | chr11:30986678-30986819 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 446-613 |
| Cow position: | chr11:62102408-62102242 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 120, 150 |
| Conread position: | 447-601 |
| Cow position: | chr11:50472357-50472512 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 449-608 |
| Cow position: | chr11:2084186-2084346 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 451-610 |
| Cow position: | chr11:66939548-66939387 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 457-610 |
| Cow position: | chr11:12555255-12555101 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 457-610 |
| Cow position: | chr11:65939812-65939660 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 463-589 |
| Cow position: | chr11:73637910-73638037 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 464-624 |
| Cow position: | chr11:68592075-68592237 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.