Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 215-310 |
| Cow position: | chr15:6300264-6300169 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-590 |
| Cow position: | chr15:41348417-41348260 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 444-610 |
| Cow position: | chr15:2968371-2968205 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 122, 139 |
| Conread position: | 444-634 |
| Cow position: | chr15:4284408-4284222 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 445-565 |
| Cow position: | chr15:32300410-32300290 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-586 |
| Cow position: | chr15:16667462-16667604 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-586 |
| Cow position: | chr15:20459275-20459417 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-586 |
| Cow position: | chr15:50333014-50332869 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 445-590 |
| Cow position: | chr15:2931534-2931681 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 445-594 |
| Cow position: | chr15:32324172-32324321 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 140 |
| Conread position: | 445-598 |
| Cow position: | chr15:44089130-44089282 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 445-600 |
| Cow position: | chr15:16415330-16415176 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-600 |
| Cow position: | chr15:17124435-17124591 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-600 |
| Cow position: | chr15:19553891-19554046 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-600 |
| Cow position: | chr15:20534417-20534572 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 445-600 |
| Cow position: | chr15:27657138-27656981 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 445-606 |
| Cow position: | chr15:20566164-20566003 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-616 |
| Cow position: | chr15:22443951-22444121 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 151 |
| Conread position: | 445-616 |
| Cow position: | chr15:25667189-25667362 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 445-617 |
| Cow position: | chr15:23572653-23572827 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-623 |
| Cow position: | chr15:26380711-26380893 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-625 |
| Cow position: | chr15:35642047-35641869 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 446-599 |
| Cow position: | chr15:26617971-26617816 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 446-601 |
| Cow position: | chr15:30956291-30956447 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 447-599 |
| Cow position: | chr15:29026849-29027003 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 447-610 |
| Cow position: | chr15:14760606-14760769 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 131 |
| Conread position: | 447-611 |
| Cow position: | chr15:11908915-11909078 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 62 |
| Conread position: | 450-600 |
| Cow position: | chr15:25366033-25366185 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 450-600 |
| Cow position: | chr15:36846156-36846306 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 143 |
| Conread position: | 457-600 |
| Cow position: | chr15:17084230-17084086 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 463-610 |
| Cow position: | chr15:26896679-26896828 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 132 |
| Conread position: | 465-621 |
| Cow position: | chr15:16492468-16492316 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 474-600 |
| Cow position: | chr15:42142880-42142753 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.