Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 445-581 |
| Cow position: | chr16:7812747-7812884 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr16:2751031-2751174 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 445-590 |
| Cow position: | chr16:3049097-3048952 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-590 |
| Cow position: | chr16:12324512-12324654 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 445-590 |
| Cow position: | chr16:44138436-44138291 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 445-593 |
| Cow position: | chr16:47274670-47274521 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-598 |
| Cow position: | chr16:10032919-10033073 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-599 |
| Cow position: | chr16:15824386-15824232 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 445-600 |
| Cow position: | chr16:3938954-3938802 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 445-600 |
| Cow position: | chr16:11467657-11467813 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 445-600 |
| Cow position: | chr16:24672806-24672650 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 445-600 |
| Cow position: | chr16:29311580-29311738 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-600 |
| Cow position: | chr16:56082308-56082152 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 445-600 |
| Cow position: | chr16:56615446-56615292 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 445-601 |
| Cow position: | chr16:33290441-33290598 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-603 |
| Cow position: | chr16:12275736-12275578 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-604 |
| Cow position: | chr16:56595333-56595173 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-606 |
| Cow position: | chr16:7928328-7928164 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-606 |
| Cow position: | chr16:21442554-21442394 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 445-607 |
| Cow position: | chr16:46548212-46548045 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 445-608 |
| Cow position: | chr16:8522333-8522174 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 445-608 |
| Cow position: | chr16:22984810-22984967 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-608 |
| Cow position: | chr16:27117361-27117528 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 445-609 |
| Cow position: | chr16:55683355-55683515 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 445-610 |
| Cow position: | chr16:2223340-2223175 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 140 |
| Conread position: | 445-610 |
| Cow position: | chr16:8738122-8738287 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-610 |
| Cow position: | chr16:13306815-13306651 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 445-610 |
| Cow position: | chr16:19282062-19282230 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 91 |
| Conread position: | 445-610 |
| Cow position: | chr16:50442605-50442772 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 445-611 |
| Cow position: | chr16:38244563-38244399 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 445-613 |
| Cow position: | chr16:7665694-7665862 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 445-613 |
| Cow position: | chr16:10011796-10011627 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 82, 161 |
| Conread position: | 445-613 |
| Cow position: | chr16:29037972-29038137 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 445-618 |
| Cow position: | chr16:45193752-45193579 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 445-619 |
| Cow position: | chr16:42107686-42107854 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 445-621 |
| Cow position: | chr16:40446318-40446496 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 445-622 |
| Cow position: | chr16:27327068-27326889 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-622 |
| Cow position: | chr16:38663654-38663477 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 121, 171 |
| Conread position: | 445-623 |
| Cow position: | chr16:9097080-9097258 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 122, 138 |
| Conread position: | 446-645 |
| Cow position: | chr16:16232114-16232312 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 120, 147 |
| Conread position: | 447-593 |
| Cow position: | chr16:17617304-17617158 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 136 |
| Conread position: | 447-598 |
| Cow position: | chr16:23033886-23034036 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 447-599 |
| Cow position: | chr16:13996137-13995987 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 448-613 |
| Cow position: | chr16:30368766-30368602 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 451-605 |
| Cow position: | chr16:31149440-31149594 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 451-614 |
| Cow position: | chr16:11584342-11584178 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 463-601 |
| Cow position: | chr16:9730131-9729995 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 474-586 |
| Cow position: | chr16:35297487-35297598 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 45 |
Show alignments to all cow chromosomes.