Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 432-600 |
| Cow position: | chr17:12249154-12248983 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 444-600 |
| Cow position: | chr17:1463235-1463078 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 445-574 |
| Cow position: | chr17:14025813-14025683 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr17:24587721-24587863 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 445-590 |
| Cow position: | chr17:32332994-32332852 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 445-590 |
| Cow position: | chr17:32419019-32418877 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 445-597 |
| Cow position: | chr17:32027355-32027200 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 445-598 |
| Cow position: | chr17:10222113-10221959 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 445-600 |
| Cow position: | chr17:5048027-5048180 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-600 |
| Cow position: | chr17:15883768-15883925 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-600 |
| Cow position: | chr17:20157704-20157858 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 445-600 |
| Cow position: | chr17:24559387-24559544 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-600 |
| Cow position: | chr17:25467079-25467242 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-600 |
| Cow position: | chr17:39963974-39964127 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 445-601 |
| Cow position: | chr17:6767164-6767008 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 149 |
| Conread position: | 445-601 |
| Cow position: | chr17:11921068-11920913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-601 |
| Cow position: | chr17:18673943-18673786 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-602 |
| Cow position: | chr17:1081301-1081460 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 445-604 |
| Cow position: | chr17:26183441-26183602 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 445-604 |
| Cow position: | chr17:30713442-30713600 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 445-605 |
| Cow position: | chr17:24895170-24895336 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 445-607 |
| Cow position: | chr17:14668599-14668763 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-608 |
| Cow position: | chr17:17222437-17222601 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 445-608 |
| Cow position: | chr17:21039654-21039812 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 72 |
| Conread position: | 445-609 |
| Cow position: | chr17:9260515-9260352 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 445-609 |
| Cow position: | chr17:9509899-9509733 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 113 |
| Conread position: | 445-609 |
| Cow position: | chr17:21718900-21718737 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 445-610 |
| Cow position: | chr17:6787033-6787198 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 445-610 |
| Cow position: | chr17:11618681-11618848 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-610 |
| Cow position: | chr17:19544134-19543972 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 445-610 |
| Cow position: | chr17:21236619-21236784 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 148 |
| Conread position: | 445-611 |
| Cow position: | chr17:25117981-25118148 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 445-612 |
| Cow position: | chr17:4817624-4817794 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-612 |
| Cow position: | chr17:32989573-32989735 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 445-612 |
| Cow position: | chr17:32993527-32993364 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 135, 61 |
| Conread position: | 445-615 |
| Cow position: | chr17:25584338-25584508 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-618 |
| Cow position: | chr17:3387814-3387986 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-618 |
| Cow position: | chr17:12289312-12289146 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 445-620 |
| Cow position: | chr17:36814458-36814634 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 160 |
| Conread position: | 446-598 |
| Cow position: | chr17:7571201-7571356 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 447-599 |
| Cow position: | chr17:25608421-25608267 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 463-590 |
| Cow position: | chr17:25473165-25473041 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 463-610 |
| Cow position: | chr17:7959295-7959442 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 51 |
Show alignments to all cow chromosomes.