Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 444-611 |
| Cow position: | chr2:16751823-16751653 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 445-564 |
| Cow position: | chr2:80235298-80235178 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-576 |
| Cow position: | chr2:1422405-1422537 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-576 |
| Cow position: | chr2:16669525-16669656 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 445-579 |
| Cow position: | chr2:46204573-46204708 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-585 |
| Cow position: | chr2:67595963-67595823 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 122, 136 |
| Conread position: | 445-588 |
| Cow position: | chr2:39483540-39483684 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr2:6039070-6039215 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 445-590 |
| Cow position: | chr2:12950108-12949964 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-590 |
| Cow position: | chr2:59396997-59396851 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-594 |
| Cow position: | chr2:68328796-68328648 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 445-594 |
| Cow position: | chr2:78249793-78249943 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-596 |
| Cow position: | chr2:56937737-56937881 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 445-599 |
| Cow position: | chr2:485633-485785 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 445-599 |
| Cow position: | chr2:11656947-11657098 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 445-599 |
| Cow position: | chr2:26694664-26694819 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-599 |
| Cow position: | chr2:74198274-74198118 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-600 |
| Cow position: | chr2:57776404-57776561 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 150 |
| Conread position: | 445-600 |
| Cow position: | chr2:63568767-63568918 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-600 |
| Cow position: | chr2:66959732-66959888 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 445-600 |
| Cow position: | chr2:73981689-73981840 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 445-601 |
| Cow position: | chr2:13369711-13369868 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr2:45597037-45597189 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-604 |
| Cow position: | chr2:65554747-65554586 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 99 |
| Conread position: | 445-607 |
| Cow position: | chr2:7194265-7194425 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 445-607 |
| Cow position: | chr2:75227260-75227421 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 445-608 |
| Cow position: | chr2:32988624-32988786 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 445-609 |
| Cow position: | chr2:22677249-22677414 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-610 |
| Cow position: | chr2:12139491-12139321 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 445-610 |
| Cow position: | chr2:15348450-15348615 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-610 |
| Cow position: | chr2:72359578-72359407 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 445-611 |
| Cow position: | chr2:36124490-36124658 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 445-611 |
| Cow position: | chr2:67810985-67810818 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 445-613 |
| Cow position: | chr2:1923828-1923658 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 445-613 |
| Cow position: | chr2:43131152-43131319 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 151 |
| Conread position: | 445-616 |
| Cow position: | chr2:13468272-13468441 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 445-616 |
| Cow position: | chr2:46033392-46033560 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 445-616 |
| Cow position: | chr2:80961909-80961736 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-618 |
| Cow position: | chr2:36963579-36963750 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 121, 109 |
| Conread position: | 445-618 |
| Cow position: | chr2:60181975-60181803 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 151 |
| Conread position: | 445-620 |
| Cow position: | chr2:78116306-78116130 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-622 |
| Cow position: | chr2:42897722-42897901 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-623 |
| Cow position: | chr2:29394952-29394772 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-623 |
| Cow position: | chr2:56350860-56350683 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 150 |
| Conread position: | 446-590 |
| Cow position: | chr2:3739787-3739642 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 446-597 |
| Cow position: | chr2:31749911-31749760 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 446-599 |
| Cow position: | chr2:44063718-44063569 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 39 |
| Conread position: | 446-608 |
| Cow position: | chr2:44022748-44022587 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 147 |
| Conread position: | 446-610 |
| Cow position: | chr2:69579621-69579456 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 447-590 |
| Cow position: | chr2:58153763-58153903 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 447-600 |
| Cow position: | chr2:50106164-50106319 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 447-601 |
| Cow position: | chr2:45499143-45498993 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 447-608 |
| Cow position: | chr2:67302075-67302236 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 48 |
| Conread position: | 448-611 |
| Cow position: | chr2:35934940-35935110 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 451-600 |
| Cow position: | chr2:32660240-32660394 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 452-608 |
| Cow position: | chr2:84480437-84480282 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 457-590 |
| Cow position: | chr2:56021380-56021515 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 463-609 |
| Cow position: | chr2:85794897-85794749 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 487-599 |
| Cow position: | chr2:73094707-73094596 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 15 |
Show alignments to all cow chromosomes.