Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 444-609 |
| Cow position: | chr21:10004767-10004599 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-583 |
| Cow position: | chr21:20160796-20160934 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 115 |
| Conread position: | 445-585 |
| Cow position: | chr21:17193629-17193490 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-586 |
| Cow position: | chr21:11353180-11353323 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-589 |
| Cow position: | chr21:29069206-29069061 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr21:27744145-27744292 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 445-593 |
| Cow position: | chr21:41621245-41621393 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 445-594 |
| Cow position: | chr21:15444965-15444815 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-594 |
| Cow position: | chr21:20153076-20153224 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 445-600 |
| Cow position: | chr21:27810507-27810665 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-600 |
| Cow position: | chr21:28882301-28882456 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 56 |
| Conread position: | 445-601 |
| Cow position: | chr21:4108895-4109051 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 445-601 |
| Cow position: | chr21:37706295-37706137 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 445-608 |
| Cow position: | chr21:18568519-18568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-608 |
| Cow position: | chr21:38918318-38918483 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-610 |
| Cow position: | chr21:5344998-5345165 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-611 |
| Cow position: | chr21:13656516-13656349 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 445-614 |
| Cow position: | chr21:44251723-44251555 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 445-616 |
| Cow position: | chr21:27521220-27521053 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 445-619 |
| Cow position: | chr21:3135749-3135575 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 113 |
| Conread position: | 445-620 |
| Cow position: | chr21:18449872-18450050 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 445-621 |
| Cow position: | chr21:12348885-12349063 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-621 |
| Cow position: | chr21:23535829-23536006 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 445-622 |
| Cow position: | chr21:27677600-27677775 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 446-610 |
| Cow position: | chr21:25344982-25345147 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 450-610 |
| Cow position: | chr21:31760100-31759943 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 452-610 |
| Cow position: | chr21:40821767-40821609 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 6 |
| Conread position: | 458-616 |
| Cow position: | chr21:12310605-12310764 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 79 |
| Conread position: | 460-614 |
| Cow position: | chr21:34727336-34727493 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 463-608 |
| Cow position: | chr21:37479455-37479311 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 130 |
| Conread position: | 485-613 |
| Cow position: | chr21:31278345-31278473 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 108 |
Show alignments to all cow chromosomes.