Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 445-576 |
| Cow position: | chr4:44772994-44772862 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-586 |
| Cow position: | chr4:28854226-28854089 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 445-588 |
| Cow position: | chr4:19708988-19709132 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-590 |
| Cow position: | chr4:19463593-19463739 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 445-590 |
| Cow position: | chr4:22138172-22138025 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 445-590 |
| Cow position: | chr4:26659348-26659491 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 65 |
| Conread position: | 445-590 |
| Cow position: | chr4:59002091-59001947 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 63 |
| Conread position: | 445-590 |
| Cow position: | chr4:67393140-67393286 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-593 |
| Cow position: | chr4:17076230-17076083 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 6 |
| Conread position: | 445-594 |
| Cow position: | chr4:25197446-25197296 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 445-594 |
| Cow position: | chr4:26959920-26959771 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 445-598 |
| Cow position: | chr4:19199238-19199084 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-598 |
| Cow position: | chr4:47305126-47305280 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-599 |
| Cow position: | chr4:68590820-68590969 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-600 |
| Cow position: | chr4:4085062-4084907 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 74 |
| Conread position: | 445-600 |
| Cow position: | chr4:53050041-53050195 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 445-600 |
| Cow position: | chr4:56755903-56756059 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr4:35291069-35291227 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 445-605 |
| Cow position: | chr4:60527229-60527388 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 445-607 |
| Cow position: | chr4:27521601-27521767 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 445-607 |
| Cow position: | chr4:50494820-50494987 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 445-610 |
| Cow position: | chr4:4647448-4647611 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 97 |
| Conread position: | 445-610 |
| Cow position: | chr4:40995779-40995943 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 151 |
| Conread position: | 445-611 |
| Cow position: | chr4:5250236-5250403 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-611 |
| Cow position: | chr4:5790691-5790861 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-615 |
| Cow position: | chr4:47748460-47748631 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-659 |
| Cow position: | chr4:68456872-68456657 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 446-598 |
| Cow position: | chr4:8182587-8182436 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 446-599 |
| Cow position: | chr4:12245259-12245412 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 447-610 |
| Cow position: | chr4:3519472-3519629 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 447-611 |
| Cow position: | chr4:42347535-42347699 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 48 |
| Conread position: | 447-616 |
| Cow position: | chr4:56746040-56746210 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 450-610 |
| Cow position: | chr4:34919220-34919061 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 464-599 |
| Cow position: | chr4:43436330-43436467 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 464-606 |
| Cow position: | chr4:51851280-51851418 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 464-647 |
| Cow position: | chr4:45629979-45629794 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 84 |
| Conread position: | 498-609 |
| Cow position: | chr4:64336180-64336068 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.