Cow genome map

Conread name: Ss1.1-rski0137_n4.5

Conread position: 438-617
Cow position: chr6:23381580-23381400 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 445-581
Cow position: chr6:48379518-48379381 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 445-590
Cow position: chr6:3936878-3937026 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 445-590
Cow position: chr6:57546133-57545990 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 445-594
Cow position: chr6:5445762-5445911 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 50

Conread position: 445-598
Cow position: chr6:16411706-16411860 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 445-599
Cow position: chr6:18447422-18447267 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 445-600
Cow position: chr6:36809109-36808953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 40

Conread position: 445-604
Cow position: chr6:32006359-32006205 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 62

Conread position: 445-605
Cow position: chr6:54406704-54406551 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 445-607
Cow position: chr6:43906588-43906425 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 445-608
Cow position: chr6:16137675-16137510 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 445-608
Cow position: chr6:49685913-49686076 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 148

Conread position: 445-609
Cow position: chr6:8369517-8369681 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 158

Conread position: 445-609
Cow position: chr6:16016129-16016296 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 46

Conread position: 445-609
Cow position: chr6:22876835-22876671 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 148

Conread position: 445-609
Cow position: chr6:54840412-54840242 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 445-610
Cow position: chr6:15587499-15587333 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 134

Conread position: 445-610
Cow position: chr6:28559633-28559800 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 445-610
Cow position: chr6:31928732-31928897 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 136

Conread position: 445-611
Cow position: chr6:19936474-19936308 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 38

Conread position: 445-613
Cow position: chr6:12761375-12761545 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 6

Conread position: 445-618
Cow position: chr6:3952614-3952787 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 158

Conread position: 445-619
Cow position: chr6:54828227-54828051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 445-624
Cow position: chr6:51530092-51529915 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 113

Conread position: 445-625
Cow position: chr6:21004772-21004948 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 149

Conread position: 445-648
Cow position: chr6:5330508-5330704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 38

Conread position: 446-576
Cow position: chr6:68816263-68816395 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 123

Conread position: 446-598
Cow position: chr6:57079520-57079673 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 446-607
Cow position: chr6:8187093-8186929 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 446-618
Cow position: chr6:35985040-35984867 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 57

Conread position: 447-607
Cow position: chr6:50771265-50771104 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 0

Conread position: 447-610
Cow position: chr6:30123072-30122908 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 44

Conread position: 447-651
Cow position: chr6:33302492-33302696 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 73

Conread position: 450-599
Cow position: chr6:37827848-37827701 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 33

Conread position: 452-620
Cow position: chr6:57143594-57143424 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 43

Conread position: 462-598
Cow position: chr6:29775724-29775866 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 464-617
Cow position: chr6:694029-693876 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 31

Conread position: 467-596
Cow position: chr6:65831478-65831608 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 470-609
Cow position: chr6:456831-456691 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Show alignments to all cow chromosomes.