Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 438-617 |
| Cow position: | chr6:23381580-23381400 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 445-581 |
| Cow position: | chr6:48379518-48379381 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr6:3936878-3937026 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 445-590 |
| Cow position: | chr6:57546133-57545990 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 445-594 |
| Cow position: | chr6:5445762-5445911 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 50 |
| Conread position: | 445-598 |
| Cow position: | chr6:16411706-16411860 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-599 |
| Cow position: | chr6:18447422-18447267 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-600 |
| Cow position: | chr6:36809109-36808953 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 445-604 |
| Cow position: | chr6:32006359-32006205 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 445-605 |
| Cow position: | chr6:54406704-54406551 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 445-607 |
| Cow position: | chr6:43906588-43906425 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-608 |
| Cow position: | chr6:16137675-16137510 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 445-608 |
| Cow position: | chr6:49685913-49686076 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 148 |
| Conread position: | 445-609 |
| Cow position: | chr6:8369517-8369681 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 120, 158 |
| Conread position: | 445-609 |
| Cow position: | chr6:16016129-16016296 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 445-609 |
| Cow position: | chr6:22876835-22876671 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-609 |
| Cow position: | chr6:54840412-54840242 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 445-610 |
| Cow position: | chr6:15587499-15587333 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 134 |
| Conread position: | 445-610 |
| Cow position: | chr6:28559633-28559800 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-610 |
| Cow position: | chr6:31928732-31928897 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 445-611 |
| Cow position: | chr6:19936474-19936308 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 445-613 |
| Cow position: | chr6:12761375-12761545 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 6 |
| Conread position: | 445-618 |
| Cow position: | chr6:3952614-3952787 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 158 |
| Conread position: | 445-619 |
| Cow position: | chr6:54828227-54828051 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-624 |
| Cow position: | chr6:51530092-51529915 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 140, 113 |
| Conread position: | 445-625 |
| Cow position: | chr6:21004772-21004948 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 445-648 |
| Cow position: | chr6:5330508-5330704 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 446-576 |
| Cow position: | chr6:68816263-68816395 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 123 |
| Conread position: | 446-598 |
| Cow position: | chr6:57079520-57079673 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 446-607 |
| Cow position: | chr6:8187093-8186929 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 446-618 |
| Cow position: | chr6:35985040-35984867 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 447-607 |
| Cow position: | chr6:50771265-50771104 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 447-610 |
| Cow position: | chr6:30123072-30122908 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 447-651 |
| Cow position: | chr6:33302492-33302696 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 450-599 |
| Cow position: | chr6:37827848-37827701 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 452-620 |
| Cow position: | chr6:57143594-57143424 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 462-598 |
| Cow position: | chr6:29775724-29775866 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 464-617 |
| Cow position: | chr6:694029-693876 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 467-596 |
| Cow position: | chr6:65831478-65831608 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 470-609 |
| Cow position: | chr6:456831-456691 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
Show alignments to all cow chromosomes.