Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 444-612 |
| Cow position: | chr7:49068744-49068572 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-585 |
| Cow position: | chr7:20411427-20411288 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 445-593 |
| Cow position: | chr7:31885691-31885839 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-594 |
| Cow position: | chr7:9128960-9128810 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-594 |
| Cow position: | chr7:37651594-37651745 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 445-597 |
| Cow position: | chr7:37697903-37698056 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-598 |
| Cow position: | chr7:28109678-28109830 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 445-599 |
| Cow position: | chr7:30290847-30290694 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-600 |
| Cow position: | chr7:49942033-49941881 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 445-600 |
| Cow position: | chr7:53834493-53834337 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr7:15548131-15548282 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 445-601 |
| Cow position: | chr7:17000824-17000981 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr7:27290401-27290244 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr7:52591905-52591748 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-603 |
| Cow position: | chr7:19797831-19797675 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 136 |
| Conread position: | 445-606 |
| Cow position: | chr7:16285479-16285319 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 445-608 |
| Cow position: | chr7:9238911-9238747 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-608 |
| Cow position: | chr7:63300294-63300456 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 151 |
| Conread position: | 445-609 |
| Cow position: | chr7:47931698-47931528 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 445-609 |
| Cow position: | chr7:58800267-58800428 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 445-610 |
| Cow position: | chr7:39093828-39093661 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-611 |
| Cow position: | chr7:40008927-40009090 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 445-613 |
| Cow position: | chr7:9070553-9070717 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 445-613 |
| Cow position: | chr7:33370490-33370652 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 445-616 |
| Cow position: | chr7:18958443-18958274 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 445-618 |
| Cow position: | chr7:10945445-10945618 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 445-618 |
| Cow position: | chr7:15559785-15559950 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 445-619 |
| Cow position: | chr7:14497379-14497551 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 445-620 |
| Cow position: | chr7:15570136-15570306 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 445-622 |
| Cow position: | chr7:43450639-43450816 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-623 |
| Cow position: | chr7:25263466-25263646 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 91 |
| Conread position: | 445-624 |
| Cow position: | chr7:3304675-3304851 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 445-624 |
| Cow position: | chr7:9068502-9068321 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 176 |
| Conread position: | 445-624 |
| Cow position: | chr7:18388301-18388120 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 126, 140 |
| Conread position: | 445-628 |
| Cow position: | chr7:48616277-48616083 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 446-590 |
| Cow position: | chr7:32549311-32549167 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 5 |
| Conread position: | 446-590 |
| Cow position: | chr7:40361750-40361894 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 446-598 |
| Cow position: | chr7:51685113-51685263 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 446-633 |
| Cow position: | chr7:35651631-35651446 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 447-590 |
| Cow position: | chr7:17750742-17750600 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 61 |
| Conread position: | 447-600 |
| Cow position: | chr7:35088757-35088913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 447-605 |
| Cow position: | chr7:7462019-7461860 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 447-610 |
| Cow position: | chr7:35096925-35096761 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 448-598 |
| Cow position: | chr7:47513584-47513438 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 124, 71 |
| Conread position: | 448-644 |
| Cow position: | chr7:51039532-51039727 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 185, 117 |
| Conread position: | 450-597 |
| Cow position: | chr7:9744842-9744694 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 457-599 |
| Cow position: | chr7:12342886-12342743 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 123 |
| Conread position: | 465-590 |
| Cow position: | chr7:36665439-36665568 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 467-608 |
| Cow position: | chr7:12468968-12469113 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 485-631 |
| Cow position: | chr7:23615818-23615671 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 108 |
Show alignments to all cow chromosomes.