Cow genome map
| Conread name: | Ss1.1-rski0137_n4.5 |
| Conread position: | 441-618 |
| Cow position: | chr8:59092822-59092647 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 445-565 |
| Cow position: | chr8:32278282-32278161 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 445-577 |
| Cow position: | chr8:1999696-1999829 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-585 |
| Cow position: | chr8:3423071-3423210 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-587 |
| Cow position: | chr8:16144197-16144340 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-590 |
| Cow position: | chr8:22273927-22274073 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-590 |
| Cow position: | chr8:38790021-38790167 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 445-590 |
| Cow position: | chr8:40280749-40280897 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 445-590 |
| Cow position: | chr8:47170011-47170155 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 445-591 |
| Cow position: | chr8:49305683-49305537 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 445-592 |
| Cow position: | chr8:31767968-31767824 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-593 |
| Cow position: | chr8:11124499-11124353 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-593 |
| Cow position: | chr8:37148377-37148526 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-597 |
| Cow position: | chr8:17199365-17199213 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 445-597 |
| Cow position: | chr8:37635927-37635779 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 445-598 |
| Cow position: | chr8:20926564-20926408 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 445-598 |
| Cow position: | chr8:25554762-25554609 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-598 |
| Cow position: | chr8:48182569-48182722 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 445-599 |
| Cow position: | chr8:3056907-3057062 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 445-600 |
| Cow position: | chr8:5477784-5477633 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-600 |
| Cow position: | chr8:26625935-26626090 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 445-600 |
| Cow position: | chr8:38696328-38696171 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 445-600 |
| Cow position: | chr8:47057597-47057443 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 445-601 |
| Cow position: | chr8:1651657-1651815 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-601 |
| Cow position: | chr8:55885040-55885192 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-602 |
| Cow position: | chr8:10293369-10293216 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 445-604 |
| Cow position: | chr8:20107724-20107569 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 445-607 |
| Cow position: | chr8:2375954-2375791 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 445-608 |
| Cow position: | chr8:32332407-32332243 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-608 |
| Cow position: | chr8:48210908-48210745 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 445-609 |
| Cow position: | chr8:5665627-5665457 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 445-609 |
| Cow position: | chr8:27731104-27731269 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-609 |
| Cow position: | chr8:39592655-39592820 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-609 |
| Cow position: | chr8:50024898-50024733 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-610 |
| Cow position: | chr8:8767071-8766904 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 445-610 |
| Cow position: | chr8:20897412-20897581 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-612 |
| Cow position: | chr8:45859875-45860046 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 445-617 |
| Cow position: | chr8:51443634-51443458 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 445-618 |
| Cow position: | chr8:39968215-39968046 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 445-619 |
| Cow position: | chr8:60746708-60746883 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 445-620 |
| Cow position: | chr8:28322037-28322211 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 445-625 |
| Cow position: | chr8:37571637-37571457 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 445-628 |
| Cow position: | chr8:24363572-24363385 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 445-631 |
| Cow position: | chr8:35817052-35816867 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 445-633 |
| Cow position: | chr8:51511790-51511606 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 446-609 |
| Cow position: | chr8:4992616-4992781 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 120, 58 |
| Conread position: | 446-612 |
| Cow position: | chr8:51524073-51524240 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 446-615 |
| Cow position: | chr8:5173217-5173045 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 447-590 |
| Cow position: | chr8:35452641-35452783 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 61 |
| Conread position: | 447-597 |
| Cow position: | chr8:10832365-10832212 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 447-598 |
| Cow position: | chr8:20783195-20783044 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 72 |
| Conread position: | 447-609 |
| Cow position: | chr8:25083243-25083402 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 146 |
| Conread position: | 448-610 |
| Cow position: | chr8:12105617-12105778 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 118, 122 |
| Conread position: | 451-593 |
| Cow position: | chr8:28383014-28382871 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 457-601 |
| Cow position: | chr8:20112510-20112656 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 466-601 |
| Cow position: | chr8:45352163-45352024 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.