Cow genome map

Conread name: Ss1.1-rspc001_h9.5

Conread position: 270-513
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 282-513
Cow position:
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 11

Conread position: 286-514
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 287-513
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 37

Conread position: 293-496
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 44

Conread position: 294-514
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 23

Conread position: 303-514
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 10

Conread position: 308-513
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 59

Conread position: 310-513
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 42

Conread position: 310-514
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 28

Conread position: 318-514
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 321-512
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 38

Conread position: 321-514
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 15, 67

Conread position: 323-513
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 34

Conread position: 325-513
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 107

Conread position: 325-514
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 62

Conread position: 328-513
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 329-513
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 330-513
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 74

Conread position: 331-512
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 84

Conread position: 331-513
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 78

Conread position: 333-513
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 334-513
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 103

Conread position: 335-514
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 71

Conread position: 336-496
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 336-511
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 338-496
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 20

Conread position: 338-510
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 338-511
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 338-513
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 339-511
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 19

Conread position: 339-512
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 339-513
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 339-513
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 70

Conread position: 340-512
Cow position:
Alignm length: 173
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 341-492
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 113

Conread position: 341-511
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 341-511
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 341-512
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 68

Conread position: 341-512
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 341-513
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 38

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 341-513
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 68

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 67

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 341-513
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 107, 163

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 341-513
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 341-513
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 109

Conread position: 341-513
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 59

Conread position: 341-514
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 59

Conread position: 341-514
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 341-514
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 341-514
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 341-514
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 341-516
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 342-510
Cow position:
Alignm length: 169
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 342-511
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 342-512
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 342-513
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 342-513
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 156, 0

Conread position: 342-513
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 342-513
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 342-514
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 139, 44

Conread position: 343-512
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 343-513
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 344-514
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 346-511
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 63

Conread position: 346-514
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 40

Conread position: 346-514
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 347-489
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 347-509
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 68

Conread position: 347-509
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 347-511
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 77

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 347-513
Cow position:
Alignm length: 167
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 348-513
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 22

Conread position: 348-513
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 348-513
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 348-514
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 56

Conread position: 349-513
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 349-514
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 57

Conread position: 350-513
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 147, 0

Conread position: 350-514
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 351-494
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 351-500
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 351-506
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 351-511
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 351-513
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 139

Conread position: 351-514
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 145, 0

Conread position: 352-492
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 57

Conread position: 352-509
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 352-510
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 352-513
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 352-513
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 352-514
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 86

Conread position: 352-514
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 144

Conread position: 354-513
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 46

Conread position: 356-512
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 356-512
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 32

Conread position: 357-510
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 29

Conread position: 357-513
Cow position:
Alignm length: 157
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 357-513
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 357-513
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 358-499
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 358-510
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 358-512
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 358-513
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 358-513
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 358-514
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 47

Conread position: 360-513
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 77

Conread position: 360-516
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 361-513
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 361-513
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 361-514
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 362-513
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 363-512
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 42

Conread position: 369-513
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 369-513
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 375-510
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 375-511
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 375-513
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 375-514
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 379-511
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 395-513
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 405-513
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.