Cow genome map

Conread name: Ss1.1-rspc001_h9.5

Conread position: 270-511
Cow position: chr3:7566492-7566259 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 54

Conread position: 278-514
Cow position: chr3:22889082-22888849 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 17

Conread position: 281-513
Cow position: chr3:31309425-31309190 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 221

Conread position: 284-513
Cow position: chr3:29334477-29334246 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 286-494
Cow position: chr3:56949145-56948948 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 8

Conread position: 286-510
Cow position: chr3:81234330-81234549 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 286-512
Cow position: chr3:3656456-3656678 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 134, 7

Conread position: 286-513
Cow position: chr3:65019924-65019689 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 38

Conread position: 286-514
Cow position: chr3:4319652-4319884 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 145, 54

Conread position: 288-493
Cow position: chr3:37041362-37041565 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 288-513
Cow position: chr3:65969110-65969338 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 53

Conread position: 289-508
Cow position: chr3:54373920-54373698 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 289-514
Cow position: chr3:2648566-2648343 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 289-514
Cow position: chr3:13241136-13240908 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 293-477
Cow position: chr3:28898275-28898091 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 23

Conread position: 293-492
Cow position: chr3:5305746-5305951 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 146, 48

Conread position: 293-513
Cow position: chr3:49996775-49996553 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 294-510
Cow position: chr3:70334746-70334531 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 30

Conread position: 295-514
Cow position: chr3:75183253-75183484 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 208

Conread position: 296-513
Cow position: chr3:2637877-2638097 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 144, 45

Conread position: 300-513
Cow position: chr3:72027589-72027803 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 75

Conread position: 301-513
Cow position: chr3:59040521-59040734 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 118

Conread position: 303-510
Cow position: chr3:15153649-15153849 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 303-511
Cow position: chr3:18059660-18059866 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 21

Conread position: 303-512
Cow position: chr3:19793632-19793427 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 303-513
Cow position: chr3:7661814-7662021 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 14

Conread position: 303-513
Cow position: chr3:22221286-22221490 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 21

Conread position: 303-513
Cow position: chr3:51234136-51233940 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 303-514
Cow position: chr3:28902805-28902597 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 125

Conread position: 303-514
Cow position: chr3:71497180-71496964 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 136, 38

Conread position: 307-510
Cow position: chr3:83199473-83199674 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 308-495
Cow position: chr3:72391045-72391234 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 33

Conread position: 308-514
Cow position: chr3:35056015-35055811 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 100

Conread position: 318-494
Cow position: chr3:30940778-30940955 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 56

Conread position: 318-513
Cow position: chr3:54782032-54781829 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 83

Conread position: 321-514
Cow position: chr3:44594597-44594789 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 31

Conread position: 321-514
Cow position: chr3:82425105-82424915 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 17

Conread position: 322-513
Cow position: chr3:52845532-52845719 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 0

Conread position: 323-513
Cow position: chr3:49363085-49363271 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 88

Conread position: 323-514
Cow position: chr3:9117003-9117199 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 31

Conread position: 324-494
Cow position: chr3:73820392-73820217 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 324-513
Cow position: chr3:10668902-10668715 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 33

Conread position: 324-513
Cow position: chr3:16710825-16710632 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 97

Conread position: 324-513
Cow position: chr3:45314321-45314516 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 324-513
Cow position: chr3:45881875-45882063 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 14

Conread position: 324-513
Cow position: chr3:80958533-80958345 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 325-509
Cow position: chr3:53910087-53910266 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 325-510
Cow position: chr3:68587001-68587179 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 41

Conread position: 325-513
Cow position: chr3:8147544-8147359 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 13

Conread position: 325-513
Cow position: chr3:33252911-33252728 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 12, 130

Conread position: 326-513
Cow position: chr3:76300750-76300938 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 327-497
Cow position: chr3:25060309-25060476 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 116, 14

Conread position: 327-508
Cow position: chr3:14212003-14211827 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 122

Conread position: 327-511
Cow position: chr3:68624199-68624381 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 31

Conread position: 328-511
Cow position: chr3:27246976-27246805 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 13

Conread position: 328-514
Cow position: chr3:35883953-35883767 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 328-514
Cow position: chr3:73395098-73395280 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 329-513
Cow position: chr3:68303296-68303482 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 330-509
Cow position: chr3:5737736-5737906 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 14

Conread position: 330-512
Cow position: chr3:62999007-62998832 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 330-513
Cow position: chr3:635162-635342 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 330-513
Cow position: chr3:79196743-79196927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 70

Conread position: 331-513
Cow position: chr3:4931857-4931666 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 331-513
Cow position: chr3:22165430-22165251 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 29

Conread position: 331-513
Cow position: chr3:76269877-76270052 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 332-509
Cow position: chr3:37848872-37848696 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 20

Conread position: 332-513
Cow position: chr3:32247999-32248178 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 333-495
Cow position: chr3:19788845-19788685 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 78

Conread position: 333-513
Cow position: chr3:15795206-15795385 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 334-513
Cow position: chr3:19044778-19044604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 335-511
Cow position: chr3:70333232-70333067 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 335-514
Cow position: chr3:44782329-44782503 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 15

Conread position: 336-475
Cow position: chr3:3164120-3163979 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 81

Conread position: 336-513
Cow position: chr3:15859389-15859218 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 76

Conread position: 337-509
Cow position: chr3:16752267-16752094 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 24

Conread position: 337-512
Cow position: chr3:1028659-1028484 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 89

Conread position: 337-514
Cow position: chr3:6579476-6579645 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 5

Conread position: 338-512
Cow position: chr3:59828401-59828225 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 338-513
Cow position: chr3:23037517-23037344 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 338-513
Cow position: chr3:31361417-31361587 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 91

Conread position: 338-514
Cow position: chr3:2506486-2506311 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 339-485
Cow position: chr3:69650896-69650753 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 61

Conread position: 339-489
Cow position: chr3:53572759-53572609 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 339-502
Cow position: chr3:56678356-56678194 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 339-511
Cow position: chr3:3883822-3883658 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 70

Conread position: 339-511
Cow position: chr3:9663179-9663007 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 339-511
Cow position: chr3:59610725-59610557 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 339-512
Cow position: chr3:11027267-11027440 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 339-512
Cow position: chr3:53270823-53270996 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 339-513
Cow position: chr3:30180079-30180247 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 339-513
Cow position: chr3:49482723-49482550 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 163

Conread position: 339-513
Cow position: chr3:53384287-53384116 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 339-513
Cow position: chr3:53428924-53428754 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 339-513
Cow position: chr3:55189761-55189586 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 62

Conread position: 339-513
Cow position: chr3:55318904-55318734 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 339-513
Cow position: chr3:62789963-62789786 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 339-513
Cow position: chr3:65022287-65022467 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 339-513
Cow position: chr3:67407373-67407203 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 71

Conread position: 339-513
Cow position: chr3:76168639-76168465 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 339-514
Cow position: chr3:22868727-22868551 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 73

Conread position: 339-514
Cow position: chr3:75687939-75687764 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 339-514
Cow position: chr3:78092518-78092346 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 340-487
Cow position: chr3:24596429-24596286 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 340-514
Cow position: chr3:46792379-46792548 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 158, 98

Conread position: 340-514
Cow position: chr3:51609192-51609019 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 341-486
Cow position: chr3:6689995-6690140 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 341-487
Cow position: chr3:26982053-26982196 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 341-494
Cow position: chr3:83988528-83988682 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 45

Conread position: 341-496
Cow position: chr3:75050622-75050474 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 341-505
Cow position: chr3:44207883-44207720 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 157, 44

Conread position: 341-506
Cow position: chr3:8814118-8813944 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 341-509
Cow position: chr3:12978622-12978455 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 341-509
Cow position: chr3:17531743-17531576 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 68

Conread position: 341-510
Cow position: chr3:210314-210483 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 341-510
Cow position: chr3:13882526-13882357 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 39

Conread position: 341-511
Cow position: chr3:9026091-9025920 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 40

Conread position: 341-511
Cow position: chr3:15973561-15973732 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 341-511
Cow position: chr3:23132174-23132006 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 68

Conread position: 341-511
Cow position: chr3:24468390-24468222 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 341-511
Cow position: chr3:58101674-58101837 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 341-511
Cow position: chr3:76155982-76156148 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 68

Conread position: 341-511
Cow position: chr3:79884491-79884318 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 341-512
Cow position: chr3:26603557-26603383 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 68

Conread position: 341-512
Cow position: chr3:40213039-40212872 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 341-512
Cow position: chr3:51578326-51578161 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 341-512
Cow position: chr3:66631357-66631180 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 144

Conread position: 341-512
Cow position: chr3:79893503-79893333 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 341-513
Cow position: chr3:1517517-1517349 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 341-513
Cow position: chr3:2025193-2025367 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 341-513
Cow position: chr3:5040312-5040139 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 17

Conread position: 341-513
Cow position: chr3:11281761-11281933 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 63

Conread position: 341-513
Cow position: chr3:15443734-15443562 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:17058551-17058383 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 341-513
Cow position: chr3:17222147-17221969 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 341-513
Cow position: chr3:20841878-20841715 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 95

Conread position: 341-513
Cow position: chr3:23105367-23105201 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 341-513
Cow position: chr3:25735911-25735739 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:28897027-28896857 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 341-513
Cow position: chr3:28904965-28905137 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:30463177-30463012 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 341-513
Cow position: chr3:34871562-34871732 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 341-513
Cow position: chr3:41366715-41366536 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 341-513
Cow position: chr3:41863620-41863786 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 341-513
Cow position: chr3:43389133-43388961 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:45667351-45667179 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 85

Conread position: 341-513
Cow position: chr3:48459334-48459165 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 341-513
Cow position: chr3:48483173-48483342 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 341-513
Cow position: chr3:51150123-51150294 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 155

Conread position: 341-513
Cow position: chr3:53150326-53150497 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 341-513
Cow position: chr3:53875770-53875598 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:55177751-55177587 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 341-513
Cow position: chr3:55730474-55730302 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:55970502-55970679 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 83

Conread position: 341-513
Cow position: chr3:56943931-56943766 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 341-513
Cow position: chr3:59317697-59317864 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 66

Conread position: 341-513
Cow position: chr3:59474117-59474284 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 341-513
Cow position: chr3:59604841-59605006 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 59, 15

Conread position: 341-513
Cow position: chr3:59947660-59947832 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:61024028-61023856 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:62186146-62186322 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 341-513
Cow position: chr3:63860616-63860446 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 341-513
Cow position: chr3:64196821-64196989 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 68

Conread position: 341-513
Cow position: chr3:70333970-70333805 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 341-513
Cow position: chr3:71474409-71474243 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 68

Conread position: 341-513
Cow position: chr3:72342240-72342412 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 341-513
Cow position: chr3:78071796-78071628 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 341-513
Cow position: chr3:82195481-82195648 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 341-513
Cow position: chr3:83215257-83215433 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 341-513
Cow position: chr3:84137820-84137650 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 341-514
Cow position: chr3:986009-986180 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 341-514
Cow position: chr3:9120840-9121007 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 15

Conread position: 341-514
Cow position: chr3:11229370-11229206 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 341-514
Cow position: chr3:14546997-14547164 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 341-514
Cow position: chr3:14552870-14553037 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 59

Conread position: 341-514
Cow position: chr3:15950918-15950752 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 149, 87

Conread position: 341-514
Cow position: chr3:27286513-27286680 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 341-514
Cow position: chr3:35074873-35075037 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 341-514
Cow position: chr3:37641320-37641491 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 90

Conread position: 341-514
Cow position: chr3:38331617-38331445 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 341-514
Cow position: chr3:45183838-45183656 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 341-514
Cow position: chr3:48810650-48810473 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 341-514
Cow position: chr3:58317953-58317778 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 341-514
Cow position: chr3:60597539-60597702 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 15

Conread position: 341-514
Cow position: chr3:74644552-74644725 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 341-514
Cow position: chr3:81666794-81666962 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 341-515
Cow position: chr3:40145459-40145633 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 341-516
Cow position: chr3:19711343-19711170 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 44

Conread position: 341-516
Cow position: chr3:26338025-26337849 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 342-494
Cow position: chr3:15388215-15388367 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 342-503
Cow position: chr3:80910591-80910751 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 342-507
Cow position: chr3:11640729-11640894 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 342-508
Cow position: chr3:1890113-1889947 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 342-509
Cow position: chr3:11987325-11987488 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 342-509
Cow position: chr3:28884165-28884002 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 342-509
Cow position: chr3:84807332-84807166 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 148, 0

Conread position: 342-510
Cow position: chr3:6299452-6299619 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 0

Conread position: 342-511
Cow position: chr3:17456272-17456105 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 82

Conread position: 342-512
Cow position: chr3:9718256-9718086 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 342-512
Cow position: chr3:74079640-74079475 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 342-513
Cow position: chr3:6265781-6265954 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 342-513
Cow position: chr3:20021265-20021432 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 58

Conread position: 342-513
Cow position: chr3:24304629-24304461 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 44

Conread position: 342-513
Cow position: chr3:31793888-31793717 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 342-513
Cow position: chr3:35802945-35802772 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 342-513
Cow position: chr3:38035594-38035424 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 66

Conread position: 342-513
Cow position: chr3:54067790-54067958 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 154, 0

Conread position: 342-513
Cow position: chr3:59597174-59597337 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 58

Conread position: 342-513
Cow position: chr3:64800554-64800383 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 342-513
Cow position: chr3:65058694-65058863 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 161, 95

Conread position: 342-513
Cow position: chr3:69205014-69205180 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 342-513
Cow position: chr3:74234182-74234345 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 67

Conread position: 342-513
Cow position: chr3:77171311-77171482 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 342-513
Cow position: chr3:78258759-78258586 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 342-513
Cow position: chr3:83671851-83672019 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 342-514
Cow position: chr3:7763652-7763823 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 342-514
Cow position: chr3:10841809-10841981 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 342-515
Cow position: chr3:41510572-41510744 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 100

Conread position: 342-516
Cow position: chr3:12178052-12178228 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 30

Conread position: 343-511
Cow position: chr3:18686903-18687063 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 343-513
Cow position: chr3:16333794-16333968 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 343-513
Cow position: chr3:54506704-54506870 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 344-489
Cow position: chr3:58010831-58010688 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 344-513
Cow position: chr3:5707215-5707046 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 346-512
Cow position: chr3:3316815-3316645 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 25

Conread position: 346-512
Cow position: chr3:47316379-47316215 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 89

Conread position: 346-513
Cow position: chr3:8974844-8975011 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 346-513
Cow position: chr3:48468173-48468340 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 347-490
Cow position: chr3:35582840-35582982 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 95

Conread position: 347-494
Cow position: chr3:14801745-14801892 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 347-494
Cow position: chr3:38283563-38283416 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 80

Conread position: 347-496
Cow position: chr3:36412087-36411936 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 347-496
Cow position: chr3:45279467-45279616 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 347-497
Cow position: chr3:38783607-38783756 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 347-499
Cow position: chr3:8591371-8591218 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 347-499
Cow position: chr3:59035041-59035193 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 347-499
Cow position: chr3:63201920-63202072 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 347-499
Cow position: chr3:80709866-80709714 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 347-503
Cow position: chr3:25945094-25945250 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 126

Conread position: 347-503
Cow position: chr3:79730517-79730674 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 52

Conread position: 347-507
Cow position: chr3:35624544-35624385 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 347-510
Cow position: chr3:1011487-1011653 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 79

Conread position: 347-510
Cow position: chr3:21014957-21014795 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 140

Conread position: 347-510
Cow position: chr3:45211302-45211465 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 151, 159

Conread position: 347-510
Cow position: chr3:56704320-56704149 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 53

Conread position: 347-510
Cow position: chr3:84174302-84174465 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 347-511
Cow position: chr3:84928104-84928269 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 347-512
Cow position: chr3:20066153-20065984 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 347-512
Cow position: chr3:45743907-45744073 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 43

Conread position: 347-512
Cow position: chr3:46259711-46259875 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 347-512
Cow position: chr3:46559714-46559553 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 80

Conread position: 347-513
Cow position: chr3:3556546-3556712 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:5044812-5044646 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:7581716-7581554 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 52

Conread position: 347-513
Cow position: chr3:7860252-7860086 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:8523154-8522990 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 59

Conread position: 347-513
Cow position: chr3:11254167-11254001 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:13301849-13301685 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 347-513
Cow position: chr3:15160521-15160681 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 347-513
Cow position: chr3:28903920-28903754 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 132

Conread position: 347-513
Cow position: chr3:31419693-31419859 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:32317830-32317665 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 347-513
Cow position: chr3:32376814-32376976 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 347-513
Cow position: chr3:36189891-36190063 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 140

Conread position: 347-513
Cow position: chr3:36375539-36375374 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 151, 106

Conread position: 347-513
Cow position: chr3:41873906-41874071 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 347-513
Cow position: chr3:44959943-44960109 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:47199126-47198962 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 347-513
Cow position: chr3:52487615-52487793 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 347-513
Cow position: chr3:54100725-54100549 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 347-513
Cow position: chr3:58134685-58134520 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 347-513
Cow position: chr3:61680318-61680481 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 347-513
Cow position: chr3:62312797-62312962 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 347-513
Cow position: chr3:62370056-62370221 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 347-513
Cow position: chr3:65308453-65308289 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 347-513
Cow position: chr3:68648175-68648341 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 62

Conread position: 347-513
Cow position: chr3:72255418-72255254 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 347-513
Cow position: chr3:73525237-73525071 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 347-513
Cow position: chr3:76056284-76056124 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 347-513
Cow position: chr3:79271710-79271545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 347-513
Cow position: chr3:81616452-81616286 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 39

Conread position: 347-513
Cow position: chr3:83934726-83934888 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 347-514
Cow position: chr3:2016436-2016597 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 347-514
Cow position: chr3:5703179-5703341 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 347-514
Cow position: chr3:23471458-23471298 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 110

Conread position: 347-514
Cow position: chr3:33329818-33329999 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 347-514
Cow position: chr3:54050030-54049864 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 347-514
Cow position: chr3:57754475-57754310 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 347-514
Cow position: chr3:59392117-59391960 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 347-514
Cow position: chr3:60186146-60186316 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 24

Conread position: 347-514
Cow position: chr3:76267974-76267809 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 347-514
Cow position: chr3:80733852-80733685 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 347-515
Cow position: chr3:66900732-66900561 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 162

Conread position: 348-496
Cow position: chr3:83770733-83770881 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 348-502
Cow position: chr3:27976522-27976369 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 348-509
Cow position: chr3:53222015-53222172 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 62

Conread position: 348-513
Cow position: chr3:17695003-17694838 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 349-513
Cow position: chr3:43896057-43895899 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 51

Conread position: 349-514
Cow position: chr3:42589101-42589264 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 145

Conread position: 351-492
Cow position: chr3:37851501-37851642 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 115

Conread position: 351-495
Cow position: chr3:65413273-65413128 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 49

Conread position: 351-495
Cow position: chr3:77365285-77365141 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 49

Conread position: 351-496
Cow position: chr3:17039617-17039764 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 351-509
Cow position: chr3:70756637-70756479 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 351-510
Cow position: chr3:72745558-72745394 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 351-511
Cow position: chr3:77188443-77188602 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 351-512
Cow position: chr3:75238462-75238623 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 351-513
Cow position: chr3:6728325-6728157 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 351-513
Cow position: chr3:21694229-21694391 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 120

Conread position: 351-513
Cow position: chr3:21867033-21866874 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 351-513
Cow position: chr3:21959664-21959829 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 49

Conread position: 351-513
Cow position: chr3:29946392-29946551 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 351-513
Cow position: chr3:42796515-42796354 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 351-513
Cow position: chr3:51033371-51033536 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 143

Conread position: 351-513
Cow position: chr3:58614461-58614628 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 351-513
Cow position: chr3:63069361-63069197 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 351-513
Cow position: chr3:67942531-67942369 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 351-513
Cow position: chr3:68289681-68289847 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 53

Conread position: 351-513
Cow position: chr3:71231401-71231562 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 351-514
Cow position: chr3:1830572-1830408 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 351-514
Cow position: chr3:2675034-2675197 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 351-514
Cow position: chr3:18700106-18699943 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 351-514
Cow position: chr3:53318406-53318575 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 55

Conread position: 351-514
Cow position: chr3:59681899-59681742 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 351-514
Cow position: chr3:60370987-60371149 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 0

Conread position: 351-516
Cow position: chr3:57577702-57577863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 352-513
Cow position: chr3:38248658-38248820 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 352-513
Cow position: chr3:51153051-51153208 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 352-513
Cow position: chr3:75966779-75966618 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 101

Conread position: 352-513
Cow position: chr3:81087634-81087472 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 352-513
Cow position: chr3:82366129-82366293 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 103

Conread position: 352-514
Cow position: chr3:7381827-7381667 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 63

Conread position: 352-516
Cow position: chr3:59702173-59702341 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 353-513
Cow position: chr3:53604739-53604580 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 354-512
Cow position: chr3:74787434-74787588 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 46

Conread position: 354-514
Cow position: chr3:22734250-22734096 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 356-513
Cow position: chr3:58929525-58929368 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 357-511
Cow position: chr3:34142700-34142550 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 357-512
Cow position: chr3:10115309-10115458 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 357-512
Cow position: chr3:17134345-17134494 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 357-512
Cow position: chr3:57706746-57706589 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 357-513
Cow position: chr3:2538251-2538401 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 357-513
Cow position: chr3:3453590-3453746 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 357-513
Cow position: chr3:12090684-12090841 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 29

Conread position: 357-514
Cow position: chr3:4071760-4071604 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 358-487
Cow position: chr3:14601692-14601565 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 358-499
Cow position: chr3:35079496-35079355 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 358-503
Cow position: chr3:49733041-49732896 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 46

Conread position: 358-508
Cow position: chr3:83889258-83889408 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 358-510
Cow position: chr3:5003645-5003793 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 358-510
Cow position: chr3:58452059-58452206 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 358-512
Cow position: chr3:53046651-53046495 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 358-512
Cow position: chr3:73589759-73589603 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 358-513
Cow position: chr3:18067144-18067294 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 358-513
Cow position: chr3:39812059-39812223 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 150

Conread position: 358-513
Cow position: chr3:44534523-44534370 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 7

Conread position: 358-513
Cow position: chr3:47417560-47417407 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 358-513
Cow position: chr3:48900321-48900166 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 358-513
Cow position: chr3:59271843-59271995 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 358-513
Cow position: chr3:77098811-77098660 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 358-514
Cow position: chr3:3262822-3262658 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 358-514
Cow position: chr3:23203219-23203064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 358-514
Cow position: chr3:23804517-23804667 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 358-514
Cow position: chr3:52652073-52651915 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 47

Conread position: 359-510
Cow position: chr3:79398155-79398306 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 359-512
Cow position: chr3:59699638-59699488 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 60

Conread position: 360-490
Cow position: chr3:20911396-20911266 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 360-510
Cow position: chr3:74515324-74515175 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 95

Conread position: 360-511
Cow position: chr3:13380261-13380116 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 360-512
Cow position: chr3:49787572-49787719 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 360-513
Cow position: chr3:4518169-4518020 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 360-513
Cow position: chr3:29234667-29234514 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 146

Conread position: 360-513
Cow position: chr3:55106135-55105982 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 360-513
Cow position: chr3:56754519-56754371 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 360-513
Cow position: chr3:64910082-64909931 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 77

Conread position: 360-514
Cow position: chr3:20802617-20802475 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 361-503
Cow position: chr3:70319790-70319647 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 361-512
Cow position: chr3:3011161-3011308 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 110

Conread position: 361-513
Cow position: chr3:2636964-2637109 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 48

Conread position: 361-513
Cow position: chr3:18479283-18479132 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 361-513
Cow position: chr3:25702327-25702167 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 361-514
Cow position: chr3:71238169-71238315 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 362-511
Cow position: chr3:3032423-3032571 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 94

Conread position: 362-511
Cow position: chr3:11029894-11029742 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 362-511
Cow position: chr3:29891393-29891244 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 362-513
Cow position: chr3:2392953-2392805 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 81

Conread position: 362-513
Cow position: chr3:4268560-4268410 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 362-513
Cow position: chr3:33460593-33460435 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 362-513
Cow position: chr3:39996872-39996729 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 363-511
Cow position: chr3:83705521-83705373 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 364-513
Cow position: chr3:2636912-2636770 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 365-511
Cow position: chr3:621453-621603 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 365-513
Cow position: chr3:42483945-42484091 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 122

Conread position: 365-513
Cow position: chr3:48537381-48537530 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 365-514
Cow position: chr3:23920410-23920261 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 365-514
Cow position: chr3:58527401-58527542 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 365-514
Cow position: chr3:58558298-58558447 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 367-511
Cow position: chr3:22078096-22078240 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 367-513
Cow position: chr3:18764122-18764269 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 367-513
Cow position: chr3:19641079-19641229 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 367-514
Cow position: chr3:39969841-39969698 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 367-516
Cow position: chr3:22899712-22899564 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 368-511
Cow position: chr3:14589212-14589068 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 58

Conread position: 368-511
Cow position: chr3:74127487-74127338 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 368-513
Cow position: chr3:44218787-44218932 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 36

Conread position: 368-513
Cow position: chr3:51543456-51543603 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 368-513
Cow position: chr3:58562715-58562865 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 74

Conread position: 371-493
Cow position: chr3:61171344-61171220 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 372-508
Cow position: chr3:6547449-6547585 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 376-511
Cow position: chr3:58497687-58497822 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 26

Conread position: 376-512
Cow position: chr3:78115563-78115427 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 376-513
Cow position: chr3:73410316-73410447 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 378-516
Cow position: chr3:29943888-29944027 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 388-516
Cow position: chr3:72626704-72626575 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 392-513
Cow position: chr3:42355710-42355828 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 393-513
Cow position: chr3:70632191-70632311 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 394-513
Cow position: chr3:42933528-42933647 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 395-512
Cow position: chr3:44415526-44415408 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 395-513
Cow position: chr3:29385916-29386033 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 401-513
Cow position: chr3:66563839-66563949 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.