Cow genome map
| Conread name: | Ss1.1-rspc003_o5.5 |
| Conread position: | 184-340 |
| Cow position: | chr11:4609811-4609974 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 186-340 |
| Cow position: | chr11:46473667-46473823 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 187-336 |
| Cow position: | chr11:66265620-66265462 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 187-340 |
| Cow position: | chr11:41104310-41104465 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 187-340 |
| Cow position: | chr11:42519761-42519600 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 187-340 |
| Cow position: | chr11:51745376-51745214 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 187-340 |
| Cow position: | chr11:65988251-65988088 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 187-340 |
| Cow position: | chr11:70399874-70399720 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 187-348 |
| Cow position: | chr11:25331718-25331889 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 187-348 |
| Cow position: | chr11:68423091-68422926 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 187-350 |
| Cow position: | chr11:23047737-23047892 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 188-331 |
| Cow position: | chr11:29802564-29802703 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 188-340 |
| Cow position: | chr11:76395798-76395639 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 191-352 |
| Cow position: | chr11:48983145-48982974 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 162 |
| Conread position: | 193-340 |
| Cow position: | chr11:19269065-19269215 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 194-394 |
| Cow position: | chr11:37372325-37372117 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 195-340 |
| Cow position: | chr11:67940701-67940557 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 198-345 |
| Cow position: | chr11:63156906-63157055 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 105 |
| Conread position: | 198-345 |
| Cow position: | chr11:63508426-63508284 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 199-340 |
| Cow position: | chr11:48650791-48650654 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 203-344 |
| Cow position: | chr11:64845645-64845502 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 234-340 |
| Cow position: | chr11:20491535-20491430 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 245-340 |
| Cow position: | chr11:46399079-46398984 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 245-340 |
| Cow position: | chr11:78543889-78543794 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 245-345 |
| Cow position: | chr11:11460447-11460345 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.