Cow genome map


           Conread name:
           Ss1.1-rspc003_o5.5
        

               Conread position:
               158-361
               

               Cow position:
               chr24:20861912-20862126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 191
               

               Conread position:
               187-333
               

               Cow position:
               chr24:40091560-40091715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               187-340
               

               Cow position:
               chr24:25678044-25677890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               187-348
               

               Cow position:
               chr24:35529928-35529768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               191-336
               

               Cow position:
               chr24:27683440-27683582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               194-340
               

               Cow position:
               chr24:30860646-30860489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               198-340
               

               Cow position:
               chr24:28279630-28279495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               198-394
               

               Cow position:
               chr24:16055506-16055697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               185, 37
               

               Conread position:
               203-340
               

               Cow position:
               chr24:39500293-39500426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               220-340
               

               Cow position:
               chr24:43733942-43733823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               232-348
               

               Cow position:
               chr24:6061441-6061554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               243-335
               

               Cow position:
               chr24:29691341-29691434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               59, 0
               
Show alignments to all cow chromosomes.