Cow genome map
| Conread name: | Ss1.1-rspc003_o5.5 |
| Conread position: | 168-340 |
| Cow position: | chrX:38840970-38840793 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 186-339 |
| Cow position: | chrX:33590787-33590632 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 186-340 |
| Cow position: | chrX:6480050-6479900 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 186-340 |
| Cow position: | chrX:33802935-33803105 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 186-341 |
| Cow position: | chrX:12725803-12725640 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 186-361 |
| Cow position: | chrX:9161648-9161468 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 187-340 |
| Cow position: | chrX:6563591-6563424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 187-340 |
| Cow position: | chrX:6656454-6656290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 129 |
| Conread position: | 187-340 |
| Cow position: | chrX:17042754-17042596 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 187-340 |
| Cow position: | chrX:40789279-40789113 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 141 |
| Conread position: | 187-341 |
| Cow position: | chrX:32743605-32743437 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 188-335 |
| Cow position: | chrX:18216337-18216194 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 188-340 |
| Cow position: | chrX:25388171-25388329 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 188-340 |
| Cow position: | chrX:29032481-29032313 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 189-345 |
| Cow position: | chrX:28787419-28787252 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 165 |
| Conread position: | 198-340 |
| Cow position: | chrX:630253-630402 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 198-340 |
| Cow position: | chrX:25338244-25338087 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 198-340 |
| Cow position: | chrX:25440942-25441087 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 221-340 |
| Cow position: | chrX:31273263-31273148 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 232-335 |
| Cow position: | chrX:18456411-18456308 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 15 |
Show alignments to all cow chromosomes.