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Cow genome map

           
Conread name:
           
Ss1.1-rspc008_d12.5
        

               
Conread position:
               
219-482
               

               
Cow position:
               
chr17:9713057-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
224-510
               

               
Cow position:
               
chr17:21325603-21325330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
203, 91
               

               
Conread position:
               
227-364
               

               
Cow position:
               
chr17:10234549-10234686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
228-429
               

               
Cow position:
               
chr17:40332034-40331841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr17:4472258-4472477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 124
               

               
Conread position:
               
228-510
               

               
Cow position:
               
chr17:3097388-3097654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
228-516
               

               
Cow position:
               
chr17:39715442-39715151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
229-432
               

               
Cow position:
               
chr17:11179819-11179626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chr17:12088594-12088370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 184
               

               
Conread position:
               
229-445
               

               
Cow position:
               
chr17:20856263-20856480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 171
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr17:28888308-28888521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
229-457
               

               
Cow position:
               
chr17:21372763-21372540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
229-483
               

               
Cow position:
               
chr17:7137256-7137007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
229-492
               

               
Cow position:
               
chr17:25193242-25193508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 178
               

               
Conread position:
               
229-499
               

               
Cow position:
               
chr17:8544582-8544316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
229-501
               

               
Cow position:
               
chr17:6270018-6269761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
229-504
               

               
Cow position:
               
chr17:31480779-31481038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
229, 18
               

               
Conread position:
               
229-506
               

               
Cow position:
               
chr17:22016812-22017081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
229-511
               

               
Cow position:
               
chr17:21788391-21788657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:9117934-9117640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:21604711-21604407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
11, 238
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:21738613-21738882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
265, 16
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:21806194-21806458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:21959430-21959693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr17:27058295-27058562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
263, 88
               

               
Conread position:
               
230-458
               

               
Cow position:
               
chr17:3387972-3387767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
230-459
               

               
Cow position:
               
chr17:19899153-19898936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 86
               

               
Conread position:
               
230-516
               

               
Cow position:
               
chr17:7698298-7698045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
265, 45
               

               
Conread position:
               
230-516
               

               
Cow position:
               
chr17:20780778-20780504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
191, 63
               

               
Conread position:
               
231-503
               

               
Cow position:
               
chr17:40394271-40394015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
186, 78
               

               
Conread position:
               
231-512
               

               
Cow position:
               
chr17:36275590-36275334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
233-447
               

               
Cow position:
               
chr17:11920915-11921106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
233-449
               

               
Cow position:
               
chr17:25139522-25139320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr17:20884774-20884517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
263, 15
               

               
Conread position:
               
233-516
               

               
Cow position:
               
chr17:21972860-21973140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
234-346
               

               
Cow position:
               
chr17:4813881-4813993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-377
               

               
Cow position:
               
chr17:14714811-14714676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr17:4286303-4286120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
234-445
               

               
Cow position:
               
chr17:18928684-18928877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
234-451
               

               
Cow position:
               
chr17:21298713-21298498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
234-499
               

               
Cow position:
               
chr17:26072511-26072749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr17:7590208-7590466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr17:21292790-21293051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
235-449
               

               
Cow position:
               
chr17:9077966-9078164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
235-489
               

               
Cow position:
               
chr17:20929492-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr17:18766733-18766986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr17:32138168-32138414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
235-506
               

               
Cow position:
               
chr17:15299603-15299867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr17:3067588-3067863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr17:25718388-25718099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr17:28468373-28468120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr17:21363629-21363444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr17:25490795-25491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr17:26225276-26225084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
236-450
               

               
Cow position:
               
chr17:15215820-15216031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
236-502
               

               
Cow position:
               
chr17:26802680-26802926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
250, 78
               

               
Conread position:
               
236-513
               

               
Cow position:
               
chr17:9935558-9935808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
237-498
               

               
Cow position:
               
chr17:27639782-27640035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
137, 85
               

               
Conread position:
               
237-506
               

               
Cow position:
               
chr17:11280845-11281096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
237-516
               

               
Cow position:
               
chr17:40741902-40741642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
238-449
               

               
Cow position:
               
chr17:42697572-42697351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 172
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr17:5250317-5250532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr17:15702623-15702376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 161
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr17:22074233-22074478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chr17:24554267-24554005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 164
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr17:12929283-12929543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
238-516
               

               
Cow position:
               
chr17:18202006-18201749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
239-423
               

               
Cow position:
               
chr17:25352449-25352280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr17:20306576-20306387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
239-448
               

               
Cow position:
               
chr17:14336381-14336179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
171, 57
               

               
Conread position:
               
239-495
               

               
Cow position:
               
chr17:35457574-35457830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
239-501
               

               
Cow position:
               
chr17:28814225-28814483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
239-502
               

               
Cow position:
               
chr17:40355505-40355267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
239-503
               

               
Cow position:
               
chr17:4833271-4833522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
254, 31
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr17:17410544-17410284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
255, 61
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr17:20992794-20993046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
253, 73
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr17:21681037-21680772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr17:22056772-22057029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
256, 26
               

               
Conread position:
               
240-511
               

               
Cow position:
               
chr17:37340788-37341036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
240-514
               

               
Cow position:
               
chr17:4214001-4213740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr17:24841940-24841691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
240-516
               

               
Cow position:
               
chr17:17193733-17193487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
241-364
               

               
Cow position:
               
chr17:41912857-41912737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
241-396
               

               
Cow position:
               
chr17:6529796-6529639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
241-459
               

               
Cow position:
               
chr17:25141820-25141591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
241-500
               

               
Cow position:
               
chr17:26807162-26806909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr17:31585681-31585412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
241-516
               

               
Cow position:
               
chr17:8079587-8079310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
242-429
               

               
Cow position:
               
chr17:5685856-5686038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
172, 80
               

               
Conread position:
               
242-516
               

               
Cow position:
               
chr17:21757878-21758145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
244-516
               

               
Cow position:
               
chr17:26231204-26230944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
246-463
               

               
Cow position:
               
chr17:5344856-5344659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
204, 28
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr17:7132187-7132426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
246-512
               

               
Cow position:
               
chr17:6566721-6566475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
248, 67
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr17:9306044-9306282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr17:5900617-5900382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
247-512
               

               
Cow position:
               
chr17:32553814-32554042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr17:15340489-15340760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr17:40288739-40289003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr17:5720133-5719879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
249-447
               

               
Cow position:
               
chr17:1364844-1364655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
163, 60
               

               
Conread position:
               
249-501
               

               
Cow position:
               
chr17:6849060-6848807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
251-469
               

               
Cow position:
               
chr17:969142-968917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
251-498
               

               
Cow position:
               
chr17:11224343-11224116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
254-445
               

               
Cow position:
               
chr17:9487548-9487354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr17:4714418-4714671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 20
               

               
Conread position:
               
255-449
               

               
Cow position:
               
chr17:35541921-35542113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
255-476
               

               
Cow position:
               
chr17:21359273-21359054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
255-516
               

               
Cow position:
               
chr17:10431736-10431983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
157, 67
               

               
Conread position:
               
258-474
               

               
Cow position:
               
chr17:21335326-21335533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 55
               

               
Conread position:
               
259-516
               

               
Cow position:
               
chr17:5012844-5013084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
262-479
               

               
Cow position:
               
chr17:3291311-3291104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
262-515
               

               
Cow position:
               
chr17:8823544-8823303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
227, 60
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr17:37430261-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
263-501
               

               
Cow position:
               
chr17:30168989-30169226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
282-429
               

               
Cow position:
               
chr17:27613443-27613296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
289-516
               

               
Cow position:
               
chr17:21922417-21922640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr17:34751206-34751412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
301-442
               

               
Cow position:
               
chr17:19544029-19544168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
303-461
               

               
Cow position:
               
chr17:10508231-10508390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
303-462
               

               
Cow position:
               
chr17:1875847-1876000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
303-496
               

               
Cow position:
               
chr17:23702831-23702639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:18818763-18818581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr17:20904906-20905089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-502
               

               
Cow position:
               
chr17:24862656-24862467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:2810835-2810619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:5349922-5350132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:10458733-10458944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:24077597-24077397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:25097654-25097456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:25126545-25126345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:27795856-27795640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr17:30728707-30728500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr17:2275664-2275483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
307-452
               

               
Cow position:
               
chr17:25122048-25122190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
309-484
               

               
Cow position:
               
chr17:5743094-5743264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
309-502
               

               
Cow position:
               
chr17:18882695-18882510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
310-516
               

               
Cow position:
               
chr17:38833237-38833036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr17:11215036-11215238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr17:21489430-21489630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
312-516
               

               
Cow position:
               
chr17:2662614-2662418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
192, 15
               

               
Conread position:
               
313-487
               

               
Cow position:
               
chr17:1634300-1634468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr17:21039748-21039565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr17:22128115-22127922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
314-516
               

               
Cow position:
               
chr17:9056507-9056707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
316-498
               

               
Cow position:
               
chr17:27440363-27440189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr17:20874583-20874390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr17:27202862-27203050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
322-507
               

               
Cow position:
               
chr17:22564366-22564193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
322-516
               

               
Cow position:
               
chr17:9746697-9746508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr17:11831934-11832105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
325-449
               

               
Cow position:
               
chr17:8723256-8723377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr17:23883088-23883271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
326-462
               

               
Cow position:
               
chr17:10803054-10802924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
326-489
               

               
Cow position:
               
chr17:8108179-8108332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
326-510
               

               
Cow position:
               
chr17:24163214-24163041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
327-506
               

               
Cow position:
               
chr17:37816018-37816188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
327-515
               

               
Cow position:
               
chr17:1492972-1493156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 18
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr17:1466240-1466436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr17:14025733-14025919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr17:12342306-12342469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
331-484
               

               
Cow position:
               
chr17:9824841-9824696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
331-490
               

               
Cow position:
               
chr17:27292282-27292436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
331-500
               

               
Cow position:
               
chr17:32273512-32273678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr17:11839895-11839709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr17:24883398-24883574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr17:25342568-25342746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr17:31856844-31856664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 26
               

               
Conread position:
               
332-494
               

               
Cow position:
               
chr17:31991102-31990950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
332-501
               

               
Cow position:
               
chr17:9940868-9940701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
332-503
               

               
Cow position:
               
chr17:25930366-25930529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
333-445
               

               
Cow position:
               
chr17:10650283-10650174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
334-449
               

               
Cow position:
               
chr17:11985706-11985821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
334-487
               

               
Cow position:
               
chr17:21777895-21777743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
334-498
               

               
Cow position:
               
chr17:5012008-5011851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
334-501
               

               
Cow position:
               
chr17:32993452-32993615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
334-502
               

               
Cow position:
               
chr17:43957830-43957670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
334-513
               

               
Cow position:
               
chr17:18720277-18720453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr17:29472636-29472459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
335-477
               

               
Cow position:
               
chr17:18776017-18776156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
335-511
               

               
Cow position:
               
chr17:15684681-15684512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
335-512
               

               
Cow position:
               
chr17:32349237-32349066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr17:9911928-9911750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr17:27048327-27048151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr17:27303798-27303965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
336-515
               

               
Cow position:
               
chr17:40312874-40312700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
338-516
               

               
Cow position:
               
chr17:20848691-20848515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
339-511
               

               
Cow position:
               
chr17:14003992-14003818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
339-516
               

               
Cow position:
               
chr17:1469540-1469369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
339-516
               

               
Cow position:
               
chr17:7143027-7142856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
340-449
               

               
Cow position:
               
chr17:20234375-20234268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr17:20932495-20932323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
341-516
               

               
Cow position:
               
chr17:16158652-16158484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
341-516
               

               
Cow position:
               
chr17:38263326-38263500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
343-510
               

               
Cow position:
               
chr17:30718255-30718415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
347-448
               

               
Cow position:
               
chr17:10825638-10825538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
347-514
               

               
Cow position:
               
chr17:33275592-33275754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
347-515
               

               
Cow position:
               
chr17:25032324-25032487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr17:24580137-24580303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr17:29356082-29356242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr17:34836329-34836163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr17:39857543-39857382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
349-516
               

               
Cow position:
               
chr17:14848392-14848550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr17:11156340-11156498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
352-516
               

               
Cow position:
               
chr17:36864783-36864620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 46
               
Show alignments to all cow chromosomes.