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Cow genome map

           
Conread name:
           
Ss1.1-rspc008_d12.5
        

               
Conread position:
               
111-445
               

               
Cow position:
               
chr18:42157782-42158112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 103
               

               
Conread position:
               
219-443
               

               
Cow position:
               
chr18:25647030-25647259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
222-390
               

               
Cow position:
               
chr18:21608652-21608810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr18:1581697-1581910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
225-416
               

               
Cow position:
               
chr18:8390393-8390206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
225-424
               

               
Cow position:
               
chr18:19881972-19882169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
227-459
               

               
Cow position:
               
chr18:49161114-49161331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
227-515
               

               
Cow position:
               
chr18:39022461-39022180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
227-516
               

               
Cow position:
               
chr18:22274625-22274916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
228-397
               

               
Cow position:
               
chr18:24705631-24705465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
228-407
               

               
Cow position:
               
chr18:35059358-35059175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
228-445
               

               
Cow position:
               
chr18:31724698-31724902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
228-492
               

               
Cow position:
               
chr18:1954399-1954644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr18:35950224-35950018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
229-453
               

               
Cow position:
               
chr18:23921515-23921723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
229-492
               

               
Cow position:
               
chr18:11233602-11233361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
229-497
               

               
Cow position:
               
chr18:52251676-52251917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
229-498
               

               
Cow position:
               
chr18:21707923-21708188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
229-501
               

               
Cow position:
               
chr18:24529658-24529932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
229-504
               

               
Cow position:
               
chr18:51178533-51178792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr18:10656635-10656354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
230-346
               

               
Cow position:
               
chr18:40475999-40476115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
230-498
               

               
Cow position:
               
chr18:3044635-3044388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
230-516
               

               
Cow position:
               
chr18:43555333-43555605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
231-499
               

               
Cow position:
               
chr18:28768568-28768304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
233-449
               

               
Cow position:
               
chr18:53039025-53038813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr18:51867340-51867614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 174
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr18:27109079-27109374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
233-516
               

               
Cow position:
               
chr18:45104256-45104525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
234-346
               

               
Cow position:
               
chr18:40356770-40356881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
234-380
               

               
Cow position:
               
chr18:39190295-39190443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
234-421
               

               
Cow position:
               
chr18:35454479-35454658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
234-445
               

               
Cow position:
               
chr18:47963816-47963612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr18:11672229-11672026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
234-501
               

               
Cow position:
               
chr18:31556980-31557223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
234-503
               

               
Cow position:
               
chr18:42751413-42751676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
216, 86
               

               
Conread position:
               
234-511
               

               
Cow position:
               
chr18:37023364-37023622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr18:18369171-18369443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
235-435
               

               
Cow position:
               
chr18:18320376-18320563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
235-435
               

               
Cow position:
               
chr18:42978458-42978648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
235-449
               

               
Cow position:
               
chr18:16379116-16378906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
235-483
               

               
Cow position:
               
chr18:41950388-41950163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr18:2773213-2773447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
235-501
               

               
Cow position:
               
chr18:52414141-52413901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
225, 33
               

               
Conread position:
               
235-511
               

               
Cow position:
               
chr18:27388770-27388507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr18:39623977-39623720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr18:33607165-33606950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 170
               

               
Conread position:
               
236-514
               

               
Cow position:
               
chr18:24343036-24342766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr18:5701435-5701168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 9
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr18:6609674-6609938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr18:12270684-12270501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr18:19961964-19962156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr18:6129865-6130063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:18699335-18699094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 155
               

               
Conread position:
               
238-504
               

               
Cow position:
               
chr18:39875074-39875334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr18:3158411-3158670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr18:27637683-27637479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr18:14091171-14090964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr18:49040436-49040633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr18:2619036-2619293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
254, 31
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr18:22055689-22055956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr18:39662951-39662699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
257, 60
               

               
Conread position:
               
240-444
               

               
Cow position:
               
chr18:4489732-4489920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
240-449
               

               
Cow position:
               
chr18:30921401-30921198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
190, 47
               

               
Conread position:
               
240-502
               

               
Cow position:
               
chr18:35888919-35889162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
253, 57
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr18:35693044-35692782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 82
               

               
Conread position:
               
241-448
               

               
Cow position:
               
chr18:56150296-56150491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
241-496
               

               
Cow position:
               
chr18:15025871-15025614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr18:23163061-23162813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
251, 59
               

               
Conread position:
               
244-504
               

               
Cow position:
               
chr18:6399458-6399698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
246-417
               

               
Cow position:
               
chr18:49543784-49543605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
246-445
               

               
Cow position:
               
chr18:50612353-50612544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
246-449
               

               
Cow position:
               
chr18:3097862-3098049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
246-516
               

               
Cow position:
               
chr18:36459115-36458853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr18:35077443-35077227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr18:40759383-40759126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
248-492
               

               
Cow position:
               
chr18:23652952-23653178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
248-515
               

               
Cow position:
               
chr18:4556003-4556245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
248, 60
               

               
Conread position:
               
253-516
               

               
Cow position:
               
chr18:19896268-19896535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
254-434
               

               
Cow position:
               
chr18:29402358-29402186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
254-449
               

               
Cow position:
               
chr18:4466812-4467003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr18:33008239-33007980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
205, 33
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr18:55128141-55127941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
255-501
               

               
Cow position:
               
chr18:56157905-56157648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
255-516
               

               
Cow position:
               
chr18:42747752-42747512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
247, 67
               

               
Conread position:
               
257-408
               

               
Cow position:
               
chr18:35478679-35478531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
257-444
               

               
Cow position:
               
chr18:11263019-11262825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr18:50974138-50974349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
263-514
               

               
Cow position:
               
chr18:52245368-52245114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
264-501
               

               
Cow position:
               
chr18:4534861-4535087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
166, 58
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr18:4673467-4673225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
229, 84
               

               
Conread position:
               
273-420
               

               
Cow position:
               
chr18:2509869-2510022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 131
               

               
Conread position:
               
281-515
               

               
Cow position:
               
chr18:51392496-51392720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
282-504
               

               
Cow position:
               
chr18:46072608-46072397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
301-489
               

               
Cow position:
               
chr18:19433892-19433712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
302-516
               

               
Cow position:
               
chr18:21266640-21266423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
303-461
               

               
Cow position:
               
chr18:23821702-23821862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
303-483
               

               
Cow position:
               
chr18:44917881-44917711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr18:42427743-42427568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr18:11754260-11754071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr18:47920876-47920679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr18:40047377-40047560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr18:56181332-56181525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
303-503
               

               
Cow position:
               
chr18:8208296-8208503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
303-506
               

               
Cow position:
               
chr18:48828646-48828843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr18:11867465-11867257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:2042362-2042577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:3180537-3180334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:18918836-18919037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:24759532-24759736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
193, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:46048881-46048679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:51691337-51691544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
190, 31
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr18:55499197-55498988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
305-516
               

               
Cow position:
               
chr18:46647038-46647230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
307-515
               

               
Cow position:
               
chr18:11322721-11322516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
309-449
               

               
Cow position:
               
chr18:49982851-49982713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
309-452
               

               
Cow position:
               
chr18:52625340-52625484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr18:22214611-22214424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr18:19272977-19273182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr18:21102646-21102852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
314-473
               

               
Cow position:
               
chr18:19809565-19809723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
314-492
               

               
Cow position:
               
chr18:51192627-51192795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
315-445
               

               
Cow position:
               
chr18:45985511-45985638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
315-462
               

               
Cow position:
               
chr18:34490398-34490249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr18:38757718-38757891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr18:4872177-4871993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
320-491
               

               
Cow position:
               
chr18:6075285-6075449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr18:12273767-12273577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
184, 14
               

               
Conread position:
               
325-459
               

               
Cow position:
               
chr18:19158218-19158352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr18:4757930-4758096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr18:7359851-7359664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr18:51675985-51676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
326-459
               

               
Cow position:
               
chr18:21768717-21768587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
326-516
               

               
Cow position:
               
chr18:4624044-4624228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr18:7952741-7952575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr18:12584738-12584924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr18:20175094-20175273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr18:51757194-51757015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
330-516
               

               
Cow position:
               
chr18:4264289-4264471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
331-449
               

               
Cow position:
               
chr18:26586514-26586631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
331-492
               

               
Cow position:
               
chr18:19788081-19787924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
331-497
               

               
Cow position:
               
chr18:47417098-47416942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
331-501
               

               
Cow position:
               
chr18:22120784-22120949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
331-513
               

               
Cow position:
               
chr18:48962035-48961856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr18:21782787-21782612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr18:24508132-24508319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
332-480
               

               
Cow position:
               
chr18:23446962-23447111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
332-506
               

               
Cow position:
               
chr18:19883631-19883463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
332-510
               

               
Cow position:
               
chr18:5647911-5647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
332-514
               

               
Cow position:
               
chr18:9008225-9008052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
332-514
               

               
Cow position:
               
chr18:16997354-16997174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
332-516
               

               
Cow position:
               
chr18:5078676-5078856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
332-516
               

               
Cow position:
               
chr18:47517109-47517297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
333-495
               

               
Cow position:
               
chr18:49655785-49655628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
333-515
               

               
Cow position:
               
chr18:52855153-52854971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
334-503
               

               
Cow position:
               
chr18:25598134-25598304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
334-506
               

               
Cow position:
               
chr18:4495790-4495955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr18:5632364-5632185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr18:21192313-21192495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr18:30586129-30586303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr18:51405815-51405986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr18:51643270-51643448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
335-504
               

               
Cow position:
               
chr18:4203833-4203995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr18:12059094-12058923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
337-486
               

               
Cow position:
               
chr18:47410636-47410494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
337-492
               

               
Cow position:
               
chr18:22170711-22170563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
337-512
               

               
Cow position:
               
chr18:17005356-17005181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
337-516
               

               
Cow position:
               
chr18:25282462-25282633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
338-458
               

               
Cow position:
               
chr18:53962334-53962453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
338-511
               

               
Cow position:
               
chr18:24719407-24719239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
338-511
               

               
Cow position:
               
chr18:51655949-51656118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
338-514
               

               
Cow position:
               
chr18:20174037-20174207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
338-516
               

               
Cow position:
               
chr18:39434918-39434744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
339-492
               

               
Cow position:
               
chr18:50359425-50359277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
339-501
               

               
Cow position:
               
chr18:56190869-56191024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
339-513
               

               
Cow position:
               
chr18:48242285-48242113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
342-516
               

               
Cow position:
               
chr18:5711565-5711730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
342-516
               

               
Cow position:
               
chr18:10322895-10322725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
344-492
               

               
Cow position:
               
chr18:47525495-47525353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
344-500
               

               
Cow position:
               
chr18:47125313-47125463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
347-499
               

               
Cow position:
               
chr18:26458264-26458411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
347-515
               

               
Cow position:
               
chr18:2863906-2864074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
348-489
               

               
Cow position:
               
chr18:11657739-11657603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
348-498
               

               
Cow position:
               
chr18:3211961-3211817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
349-499
               

               
Cow position:
               
chr18:45558230-45558084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
349-515
               

               
Cow position:
               
chr18:11377446-11377285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr18:56301972-56301809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
364-516
               

               
Cow position:
               
chr18:4182121-4182270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
368-516
               

               
Cow position:
               
chr18:2098681-2098824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 31
               
Show alignments to all cow chromosomes.