Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 223-506
Cow position: chr21:30835649-30835395 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 224-504
Cow position: chr21:41610462-41610197 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 85

Conread position: 225-516
Cow position: chr21:47713725-47713989 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 86

Conread position: 228-435
Cow position: chr21:31090137-31090342 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 228-449
Cow position: chr21:30970214-30970015 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 58

Conread position: 228-449
Cow position: chr21:42131064-42131275 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 6

Conread position: 229-346
Cow position: chr21:2926864-2926980 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 16

Conread position: 229-394
Cow position: chr21:11251312-11251150 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 47

Conread position: 229-429
Cow position: chr21:652277-652477 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 121

Conread position: 229-445
Cow position: chr21:30249671-30249459 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 229-449
Cow position: chr21:21479015-21479221 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 48

Conread position: 229-472
Cow position: chr21:25159469-25159227 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 19

Conread position: 229-483
Cow position: chr21:37928927-37928700 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 229-501
Cow position: chr21:27677757-27677515 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 229-501
Cow position: chr21:40475777-40475531 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 263, 19

Conread position: 229-514
Cow position: chr21:17559641-17559911 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 164, 16

Conread position: 229-515
Cow position: chr21:26647723-26647994 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 5

Conread position: 229-516
Cow position: chr21:47324-47054 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 265, 85

Conread position: 229-516
Cow position: chr21:33351048-33350756 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 177

Conread position: 229-516
Cow position: chr21:34390677-34390959 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 55

Conread position: 230-514
Cow position: chr21:8545743-8546000 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 72

Conread position: 230-515
Cow position: chr21:18289954-18289680 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 83

Conread position: 230-515
Cow position: chr21:28924399-28924127 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 266, 9

Conread position: 231-445
Cow position: chr21:20260022-20260235 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 80

Conread position: 232-516
Cow position: chr21:8452191-8451909 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 116, 44

Conread position: 233-449
Cow position: chr21:41450667-41450462 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 182, 12

Conread position: 233-451
Cow position: chr21:31993125-31992906 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 12

Conread position: 233-516
Cow position: chr21:39888454-39888732 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 158, 13

Conread position: 234-493
Cow position: chr21:44825603-44825848 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 234-497
Cow position: chr21:44672047-44671782 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 21

Conread position: 234-498
Cow position: chr21:36682598-36682361 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 234-501
Cow position: chr21:37706141-37706382 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 14

Conread position: 234-501
Cow position: chr21:45835117-45835370 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 82

Conread position: 234-511
Cow position: chr21:10515107-10514831 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 89

Conread position: 234-511
Cow position: chr21:13365637-13365368 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 88, 109

Conread position: 234-515
Cow position: chr21:37296796-37297068 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 20

Conread position: 234-516
Cow position: chr21:34004-33737 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 150, 20

Conread position: 234-516
Cow position: chr21:40266394-40266140 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 10

Conread position: 234-516
Cow position: chr21:46132864-46132591 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 262, 88

Conread position: 235-449
Cow position: chr21:37360968-37361162 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 235-506
Cow position: chr21:20318782-20318542 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 235-516
Cow position: chr21:11779267-11779515 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 236-516
Cow position: chr21:41974097-41974359 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 257, 77

Conread position: 236-516
Cow position: chr21:42841315-42841584 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 258, 78

Conread position: 237-450
Cow position: chr21:27744298-27744104 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 237-516
Cow position: chr21:1764588-1764848 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 61

Conread position: 238-429
Cow position: chr21:9417876-9418058 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 84

Conread position: 238-429
Cow position: chr21:30249909-30250104 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 110, 131

Conread position: 238-501
Cow position: chr21:46470489-46470219 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 175

Conread position: 238-516
Cow position: chr21:30255989-30256254 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 119, 68

Conread position: 238-516
Cow position: chr21:36795892-36795616 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 84

Conread position: 239-420
Cow position: chr21:3359116-3359293 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 239-444
Cow position: chr21:5962075-5961862 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 83, 156

Conread position: 239-445
Cow position: chr21:29418840-29418652 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 59

Conread position: 239-446
Cow position: chr21:32272195-32272003 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 239-498
Cow position: chr21:30157518-30157770 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 68

Conread position: 239-500
Cow position: chr21:42562916-42562665 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 94

Conread position: 239-512
Cow position: chr21:38720516-38720272 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 255, 56

Conread position: 239-516
Cow position: chr21:868652-868910 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 254, 77

Conread position: 240-449
Cow position: chr21:32297242-32297439 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 240-483
Cow position: chr21:8648543-8648308 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 153, 70

Conread position: 240-487
Cow position: chr21:30980293-30980530 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 240-501
Cow position: chr21:27568893-27569134 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 240-516
Cow position: chr21:40432730-40432465 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 131, 0

Conread position: 241-516
Cow position: chr21:13584787-13585038 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 241-516
Cow position: chr21:47363459-47363722 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 252, 56

Conread position: 242-510
Cow position: chr21:36910215-36909957 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 242-516
Cow position: chr21:3585100-3585352 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 251, 71

Conread position: 242-516
Cow position: chr21:42384800-42384526 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 162

Conread position: 243-516
Cow position: chr21:30231433-30231680 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 58

Conread position: 245-449
Cow position: chr21:26658700-26658902 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 246-465
Cow position: chr21:35569079-35569302 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 154

Conread position: 246-481
Cow position: chr21:12739348-12739126 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 205, 72

Conread position: 246-516
Cow position: chr21:22209983-22210228 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 247-461
Cow position: chr21:1264718-1264489 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 168

Conread position: 247-516
Cow position: chr21:20153216-20152970 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 50

Conread position: 253-449
Cow position: chr21:29014284-29014479 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 253-492
Cow position: chr21:13164132-13163901 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 22

Conread position: 253-516
Cow position: chr21:26245183-26244934 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 254-454
Cow position: chr21:29001894-29002078 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 254-458
Cow position: chr21:16927828-16928035 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 74

Conread position: 255-428
Cow position: chr21:8978720-8978548 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 93

Conread position: 255-434
Cow position: chr21:48478622-48478803 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 134

Conread position: 255-443
Cow position: chr21:42355892-42355716 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 255-445
Cow position: chr21:11057608-11057798 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 94

Conread position: 255-448
Cow position: chr21:40305220-40305024 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 19

Conread position: 255-484
Cow position: chr21:14228009-14228230 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 93, 32

Conread position: 255-487
Cow position: chr21:28237448-28237659 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 257-408
Cow position: chr21:19063253-19063106 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 259-516
Cow position: chr21:18790305-18790543 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 45

Conread position: 277-429
Cow position: chr21:34776875-34777020 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 277-462
Cow position: chr21:5406059-5405882 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 280-501
Cow position: chr21:44591968-44592176 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 281-497
Cow position: chr21:15279910-15279695 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 164, 42

Conread position: 282-515
Cow position: chr21:3818454-3818227 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 35

Conread position: 300-516
Cow position: chr21:641811-641602 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 189, 16

Conread position: 302-448
Cow position: chr21:12200325-12200181 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 303-491
Cow position: chr21:6735969-6736146 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 303-497
Cow position: chr21:36763286-36763097 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 54

Conread position: 303-512
Cow position: chr21:31279477-31279278 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 303-514
Cow position: chr21:47763893-47764097 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 13

Conread position: 303-516
Cow position: chr21:6051728-6051522 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 49

Conread position: 303-516
Cow position: chr21:6713300-6713510 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 13

Conread position: 303-516
Cow position: chr21:19259040-19258840 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 193, 13

Conread position: 303-516
Cow position: chr21:36508457-36508257 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 303-516
Cow position: chr21:44724152-44724349 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 13

Conread position: 309-491
Cow position: chr21:26567557-26567735 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 91

Conread position: 309-502
Cow position: chr21:18800316-18800507 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 145, 39

Conread position: 309-503
Cow position: chr21:27624919-27624729 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 92

Conread position: 309-514
Cow position: chr21:45920837-45921040 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 61

Conread position: 309-516
Cow position: chr21:396085-395886 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 18

Conread position: 309-516
Cow position: chr21:734809-734612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 91

Conread position: 309-516
Cow position: chr21:10538035-10538236 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 90

Conread position: 309-516
Cow position: chr21:24642728-24642536 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 184, 29

Conread position: 309-516
Cow position: chr21:33563227-33563026 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 94

Conread position: 310-502
Cow position: chr21:30119915-30119726 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 12

Conread position: 310-506
Cow position: chr21:16696590-16696396 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 64

Conread position: 312-458
Cow position: chr21:42466002-42465860 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 10

Conread position: 314-445
Cow position: chr21:40059240-40059114 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 314-513
Cow position: chr21:41287581-41287776 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 179, 20

Conread position: 316-514
Cow position: chr21:36695874-36696072 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 73

Conread position: 318-498
Cow position: chr21:17265789-17265965 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 52

Conread position: 319-493
Cow position: chr21:19359964-19360135 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 81

Conread position: 320-511
Cow position: chr21:41579965-41579780 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 71

Conread position: 320-516
Cow position: chr21:16152649-16152452 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 14

Conread position: 320-516
Cow position: chr21:28919322-28919508 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 173, 6

Conread position: 322-511
Cow position: chr21:42413891-42414079 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 171, 76

Conread position: 322-516
Cow position: chr21:471883-471693 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 68

Conread position: 323-516
Cow position: chr21:15584215-15584404 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 27

Conread position: 325-516
Cow position: chr21:7581701-7581886 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 74

Conread position: 325-516
Cow position: chr21:37344900-37345081 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 327-506
Cow position: chr21:14452434-14452264 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 23

Conread position: 327-516
Cow position: chr21:10264232-10264048 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 21

Conread position: 327-516
Cow position: chr21:42007262-42007447 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 166, 21

Conread position: 328-449
Cow position: chr21:42135415-42135536 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 72

Conread position: 328-502
Cow position: chr21:10410423-10410257 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 71

Conread position: 329-497
Cow position: chr21:22939970-22939804 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 70

Conread position: 329-516
Cow position: chr21:17890500-17890319 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 28

Conread position: 331-498
Cow position: chr21:21169298-21169456 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 68

Conread position: 331-501
Cow position: chr21:46809568-46809738 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 55

Conread position: 331-504
Cow position: chr21:24797850-24797684 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 19

Conread position: 331-516
Cow position: chr21:976945-977127 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 17

Conread position: 331-516
Cow position: chr21:10004688-10004871 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 68

Conread position: 331-516
Cow position: chr21:17184115-17183939 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 17, 68

Conread position: 331-516
Cow position: chr21:31159593-31159419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 165, 20

Conread position: 331-516
Cow position: chr21:32339542-32339721 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 69

Conread position: 331-516
Cow position: chr21:40589285-40589469 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 163, 66

Conread position: 332-449
Cow position: chr21:42017408-42017523 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 16

Conread position: 332-504
Cow position: chr21:802120-802285 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 67

Conread position: 332-505
Cow position: chr21:10118761-10118589 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 332-516
Cow position: chr21:1511484-1511308 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 161, 24

Conread position: 332-516
Cow position: chr21:23321883-23322062 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 160, 16

Conread position: 333-497
Cow position: chr21:713139-712979 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 66

Conread position: 333-501
Cow position: chr21:7584044-7583884 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 333-516
Cow position: chr21:29978563-29978744 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 70

Conread position: 334-494
Cow position: chr21:40291553-40291706 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 65

Conread position: 334-501
Cow position: chr21:7768631-7768471 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 334-515
Cow position: chr21:4281687-4281856 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 334-516
Cow position: chr21:3360820-3360998 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 65

Conread position: 334-516
Cow position: chr21:10673314-10673142 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 14

Conread position: 334-516
Cow position: chr21:12461774-12461954 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 14

Conread position: 334-516
Cow position: chr21:27341402-27341577 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 159, 11

Conread position: 334-516
Cow position: chr21:28244663-28244485 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 162, 14

Conread position: 334-516
Cow position: chr21:38900967-38900792 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 335-491
Cow position: chr21:30938474-30938629 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 123, 13

Conread position: 335-499
Cow position: chr21:41598003-41597844 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 13

Conread position: 335-514
Cow position: chr21:17642792-17642966 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 30

Conread position: 335-516
Cow position: chr21:4399997-4399819 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 64

Conread position: 335-516
Cow position: chr21:7377734-7377911 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 21

Conread position: 335-516
Cow position: chr21:20160868-20160694 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 168, 13

Conread position: 336-497
Cow position: chr21:28030479-28030324 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 12

Conread position: 336-515
Cow position: chr21:44565531-44565703 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 160, 12

Conread position: 336-516
Cow position: chr21:957863-957688 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 43

Conread position: 338-452
Cow position: chr21:14760756-14760642 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 61

Conread position: 338-500
Cow position: chr21:8213090-8213245 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 57

Conread position: 338-505
Cow position: chr21:45473568-45473730 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 60

Conread position: 338-516
Cow position: chr21:6998139-6997956 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 62

Conread position: 338-516
Cow position: chr21:28989803-28989624 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 156, 60

Conread position: 339-516
Cow position: chr21:15976822-15976649 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 60

Conread position: 347-510
Cow position: chr21:37837885-37838040 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 347-515
Cow position: chr21:42209448-42209614 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 149, 52

Conread position: 347-516
Cow position: chr21:10001256-10001091 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 146, 51

Conread position: 348-516
Cow position: chr21:41827978-41828150 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 51

Conread position: 349-498
Cow position: chr21:25383205-25383060 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 351-516
Cow position: chr21:5427114-5426957 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 142, 33

Conread position: 351-516
Cow position: chr21:6388176-6388018 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 354-511
Cow position: chr21:7823538-7823382 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 48

Conread position: 362-516
Cow position: chr21:23460299-23460156 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.