Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 197-490
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 55, 15

Conread position: 213-516
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 283, 9

Conread position: 216-435
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 132, 29

Conread position: 220-497
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 24

Conread position: 228-516
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 264, 42

Conread position: 228-516
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 120, 10

Conread position: 229-421
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 80

Conread position: 229-433
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 229-435
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 17

Conread position: 229-449
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 101

Conread position: 229-449
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 18

Conread position: 229-516
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 16

Conread position: 229-516
Cow position:
Alignm length: 290
Alignm identity: 201
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 272, 67

Conread position: 230-498
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 230-514
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 92, 40

Conread position: 232-449
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 16

Conread position: 233-445
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 76

Conread position: 233-473
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 216, 12

Conread position: 233-516
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 18

Conread position: 233-516
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 257, 11

Conread position: 234-380
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 234-449
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 41

Conread position: 234-449
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 234-462
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 82, 144

Conread position: 234-478
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 150, 20

Conread position: 234-504
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 80

Conread position: 234-506
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 262, 41

Conread position: 234-516
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 258, 12

Conread position: 234-516
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 235-372
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 11

Conread position: 235-372
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 119, 87

Conread position: 235-461
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 235-501
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 235-503
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 156

Conread position: 235-516
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 168

Conread position: 235-516
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 136, 13

Conread position: 236-417
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 236-500
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 51

Conread position: 236-501
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 153

Conread position: 236-516
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 248, 9

Conread position: 236-516
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 177

Conread position: 239-414
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 80, 113

Conread position: 239-456
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 7

Conread position: 239-492
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 38

Conread position: 239-494
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 67

Conread position: 239-495
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 45

Conread position: 239-502
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 7

Conread position: 239-516
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 139

Conread position: 239-516
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 257, 84

Conread position: 240-442
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 70, 100

Conread position: 240-458
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 240-516
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 253, 82

Conread position: 241-463
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 210, 13

Conread position: 241-516
Cow position:
Alignm length: 280
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 252, 59

Conread position: 242-501
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 218, 33

Conread position: 242-515
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 156, 115

Conread position: 242-516
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 106, 160

Conread position: 243-408
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 130, 79

Conread position: 244-502
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 239, 90

Conread position: 245-449
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 246-494
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 31

Conread position: 246-501
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 247-437
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 247-449
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 86, 21

Conread position: 247-449
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 160

Conread position: 247-487
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 157

Conread position: 247-512
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 156

Conread position: 248-450
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 162

Conread position: 248-509
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 248-516
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 100, 27

Conread position: 249-498
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 253-434
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 253-516
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 95, 107

Conread position: 253-516
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 249, 23

Conread position: 254-462
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 160

Conread position: 255-515
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 256-452
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 147

Conread position: 257-441
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 17

Conread position: 257-511
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 264-516
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 105

Conread position: 267-448
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 118, 39

Conread position: 270-516
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 43

Conread position: 280-506
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 39

Conread position: 303-501
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 98

Conread position: 303-502
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 17

Conread position: 303-504
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 46

Conread position: 303-516
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 303-516
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 23

Conread position: 303-516
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 18

Conread position: 303-516
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 13

Conread position: 303-516
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 13

Conread position: 303-516
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 16

Conread position: 303-516
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 13

Conread position: 303-516
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 13

Conread position: 309-449
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 96

Conread position: 309-516
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 40

Conread position: 310-516
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 92

Conread position: 311-428
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 40

Conread position: 311-516
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 23

Conread position: 311-516
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 134, 23

Conread position: 311-516
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 15

Conread position: 313-438
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 313-449
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 37

Conread position: 316-499
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 317-515
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 319-451
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 15

Conread position: 320-504
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 14

Conread position: 323-512
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 74

Conread position: 323-514
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 79

Conread position: 325-449
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 77

Conread position: 326-498
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 326-511
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 170, 22

Conread position: 326-516
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 82

Conread position: 327-502
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 16

Conread position: 327-514
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 166, 21

Conread position: 329-516
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 61

Conread position: 331-500
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 30

Conread position: 331-515
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 162, 17

Conread position: 331-516
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 333-516
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 334-497
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 14

Conread position: 334-497
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 334-516
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 65

Conread position: 334-516
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 11

Conread position: 335-478
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 335-482
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 64

Conread position: 336-513
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 12

Conread position: 339-516
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 58

Conread position: 343-516
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 347-499
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 347-516
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 55

Conread position: 348-501
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 54

Conread position: 352-516
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 144, 47

Conread position: 353-516
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 45

Conread position: 359-516
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 137, 40

Conread position: 369-516
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 127, 30

Show alignments to all cow chromosomes.