Cow genome map
| Conread name: | Ss1.1-rspc008_d12.5 |
| Conread position: | 220-498 |
| Cow position: | chr25:35826043-35826315 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 164, 14 |
| Conread position: | 227-445 |
| Cow position: | chr25:27520534-27520740 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 228-491 |
| Cow position: | chr25:3744522-3744769 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 259, 65 |
| Conread position: | 229-355 |
| Cow position: | chr25:14212616-14212743 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 229-437 |
| Cow position: | chr25:32667047-32667245 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 229-445 |
| Cow position: | chr25:36135902-36136122 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 9, 174 |
| Conread position: | 229-449 |
| Cow position: | chr25:7470589-7470376 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 229-449 |
| Cow position: | chr25:14216015-14215804 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 195, 26 |
| Conread position: | 229-449 |
| Cow position: | chr25:30624860-30625069 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 229-500 |
| Cow position: | chr25:28597392-28597643 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 229-501 |
| Cow position: | chr25:7023395-7023134 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 149, 19 |
| Conread position: | 229-501 |
| Cow position: | chr25:15565780-15566038 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 229-506 |
| Cow position: | chr25:33773559-33773819 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 25 |
| Conread position: | 229-510 |
| Cow position: | chr25:11957016-11956760 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 229-516 |
| Cow position: | chr25:23918075-23917793 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 230-422 |
| Cow position: | chr25:16316020-16316213 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 230-500 |
| Cow position: | chr25:6473866-6474119 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 230-500 |
| Cow position: | chr25:7008131-7007880 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 231-516 |
| Cow position: | chr25:28666679-28666393 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 88 |
| Conread position: | 233-435 |
| Cow position: | chr25:15695485-15695291 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 41 |
| Conread position: | 233-516 |
| Cow position: | chr25:1838449-1838188 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 260, 21 |
| Conread position: | 234-435 |
| Cow position: | chr25:15305886-15305706 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 234-486 |
| Cow position: | chr25:21048992-21049232 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 135, 14 |
| Conread position: | 234-515 |
| Cow position: | chr25:1823885-1824146 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 259, 75 |
| Conread position: | 234-516 |
| Cow position: | chr25:18906121-18905836 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 234-516 |
| Cow position: | chr25:21245388-21245653 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 262, 14 |
| Conread position: | 234-516 |
| Cow position: | chr25:30619275-30619014 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 263, 41 |
| Conread position: | 235-444 |
| Cow position: | chr25:37965468-37965276 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 235-492 |
| Cow position: | chr25:13503657-13503409 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 236-449 |
| Cow position: | chr25:7061027-7061242 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 112, 165 |
| Conread position: | 236-489 |
| Cow position: | chr25:15218362-15218115 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 236-501 |
| Cow position: | chr25:19478894-19478642 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 236-516 |
| Cow position: | chr25:33555812-33555558 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 265, 59 |
| Conread position: | 237-516 |
| Cow position: | chr25:10504133-10504388 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 256, 13 |
| Conread position: | 238-381 |
| Cow position: | chr25:14212067-14211925 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 238-487 |
| Cow position: | chr25:36019437-36019685 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 109, 168 |
| Conread position: | 238-516 |
| Cow position: | chr25:26052133-26051851 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 239-372 |
| Cow position: | chr25:11841500-11841361 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 239-467 |
| Cow position: | chr25:12509608-12509839 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 239-515 |
| Cow position: | chr25:11585730-11585468 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 255, 71 |
| Conread position: | 240-448 |
| Cow position: | chr25:13805227-13805028 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 240-501 |
| Cow position: | chr25:12195020-12195259 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 241-449 |
| Cow position: | chr25:30278998-30279194 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 241-460 |
| Cow position: | chr25:34170168-34169947 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 242-498 |
| Cow position: | chr25:11038561-11038324 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 245-445 |
| Cow position: | chr25:21285096-21284894 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 156 |
| Conread position: | 245-502 |
| Cow position: | chr25:14225561-14225327 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 145, 9 |
| Conread position: | 246-429 |
| Cow position: | chr25:35758630-35758811 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 246-501 |
| Cow position: | chr25:12997814-12997562 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 192, 67 |
| Conread position: | 247-476 |
| Cow position: | chr25:22520553-22520323 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 247-516 |
| Cow position: | chr25:27801472-27801237 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 247-516 |
| Cow position: | chr25:36120723-36120453 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 248-389 |
| Cow position: | chr25:36273565-36273425 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 248-498 |
| Cow position: | chr25:9989910-9990140 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 248-498 |
| Cow position: | chr25:34241894-34242134 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 253-516 |
| Cow position: | chr25:33256559-33256305 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 254-478 |
| Cow position: | chr25:6682864-6683080 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 254-516 |
| Cow position: | chr25:17144639-17144374 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 255-487 |
| Cow position: | chr25:17775216-17774963 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 155 |
| Conread position: | 255-498 |
| Cow position: | chr25:20461301-20461077 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 255-516 |
| Cow position: | chr25:13443222-13443463 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 166, 46 |
| Conread position: | 257-449 |
| Cow position: | chr25:23323680-23323504 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 257-498 |
| Cow position: | chr25:26161187-26160935 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 154 |
| Conread position: | 280-516 |
| Cow position: | chr25:7581253-7581474 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 297-473 |
| Cow position: | chr25:13735869-13736042 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 300-448 |
| Cow position: | chr25:18491198-18491053 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 302-502 |
| Cow position: | chr25:36017694-36017508 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 302-515 |
| Cow position: | chr25:14197019-14196811 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 192, 25 |
| Conread position: | 303-422 |
| Cow position: | chr25:23769730-23769846 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 303-512 |
| Cow position: | chr25:12807201-12806997 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 303-516 |
| Cow position: | chr25:36535259-36535486 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 309-448 |
| Cow position: | chr25:22531432-22531296 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 309-511 |
| Cow position: | chr25:12252653-12252850 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 309-516 |
| Cow position: | chr25:17658764-17658558 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 309-516 |
| Cow position: | chr25:20447725-20447521 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 309-516 |
| Cow position: | chr25:21894734-21894936 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 185, 34 |
| Conread position: | 311-452 |
| Cow position: | chr25:11857834-11857976 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 311-502 |
| Cow position: | chr25:13223050-13222864 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 311-516 |
| Cow position: | chr25:17704891-17704694 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 190, 24 |
| Conread position: | 312-516 |
| Cow position: | chr25:22750861-22751058 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 182, 19 |
| Conread position: | 314-481 |
| Cow position: | chr25:36872906-36873069 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 314-516 |
| Cow position: | chr25:25716794-25716601 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 316-516 |
| Cow position: | chr25:18541800-18541999 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 178, 83 |
| Conread position: | 318-432 |
| Cow position: | chr25:31343950-31344064 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 320-514 |
| Cow position: | chr25:18760568-18760755 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 325-498 |
| Cow position: | chr25:31762471-31762638 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 325-499 |
| Cow position: | chr25:4009233-4009062 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 325-516 |
| Cow position: | chr25:16867376-16867190 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 74, 7 |
| Conread position: | 325-516 |
| Cow position: | chr25:36762243-36762055 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 326-445 |
| Cow position: | chr25:11272509-11272393 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 73 |
| Conread position: | 327-494 |
| Cow position: | chr25:7380706-7380865 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 327-505 |
| Cow position: | chr25:7673437-7673258 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 329-516 |
| Cow position: | chr25:7726796-7726615 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 331-449 |
| Cow position: | chr25:22373358-22373476 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 331-516 |
| Cow position: | chr25:11316031-11315856 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 331-516 |
| Cow position: | chr25:20008263-20008084 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 331-516 |
| Cow position: | chr25:20069850-20069673 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 331-516 |
| Cow position: | chr25:28187815-28187996 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 332-505 |
| Cow position: | chr25:61779-61613 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 332-515 |
| Cow position: | chr25:16921665-16921845 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 332-516 |
| Cow position: | chr25:15440653-15440826 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 332-516 |
| Cow position: | chr25:21893468-21893286 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 162, 67 |
| Conread position: | 333-449 |
| Cow position: | chr25:7216952-7216840 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 333-462 |
| Cow position: | chr25:8347780-8347652 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 15 |
| Conread position: | 333-501 |
| Cow position: | chr25:9615965-9615804 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 334-449 |
| Cow position: | chr25:23016147-23016034 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 334-504 |
| Cow position: | chr25:23779203-23779368 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 25 |
| Conread position: | 334-511 |
| Cow position: | chr25:9269470-9269303 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 167, 17 |
| Conread position: | 334-514 |
| Cow position: | chr25:35109140-35109313 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 334-516 |
| Cow position: | chr25:17474386-17474563 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 334-516 |
| Cow position: | chr25:23244874-23245052 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 64 |
| Conread position: | 335-441 |
| Cow position: | chr25:19106543-19106440 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 335-498 |
| Cow position: | chr25:6259013-6258853 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 335-516 |
| Cow position: | chr25:30817015-30816836 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 158, 15 |
| Conread position: | 335-516 |
| Cow position: | chr25:33663778-33663957 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 336-514 |
| Cow position: | chr25:26087646-26087470 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 336-516 |
| Cow position: | chr25:15715000-15714822 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 338-516 |
| Cow position: | chr25:5920204-5920034 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 339-514 |
| Cow position: | chr25:24862999-24862828 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 339-516 |
| Cow position: | chr25:14513237-14513062 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 339-516 |
| Cow position: | chr25:26701149-26700981 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 342-516 |
| Cow position: | chr25:10643190-10643359 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 159, 14 |
| Conread position: | 342-516 |
| Cow position: | chr25:36081994-36081827 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 151, 6 |
| Conread position: | 343-516 |
| Cow position: | chr25:23817721-23817893 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 56 |
| Conread position: | 346-516 |
| Cow position: | chr25:12840602-12840772 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 49 |
| Conread position: | 347-501 |
| Cow position: | chr25:30656534-30656679 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 347-516 |
| Cow position: | chr25:22242078-22241919 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 347-516 |
| Cow position: | chr25:22730943-22730779 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 348-516 |
| Cow position: | chr25:31732207-31732385 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 349-501 |
| Cow position: | chr25:35090456-35090608 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 351-498 |
| Cow position: | chr25:36840507-36840366 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 352-516 |
| Cow position: | chr25:8961880-8961718 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 371-516 |
| Cow position: | chr25:9349193-9349330 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 125, 24 |
Show alignments to all cow chromosomes.