Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 224-504
Cow position: chr26:13875301-13875024 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 146, 10

Conread position: 227-506
Cow position: chr26:31605663-31605388 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 7

Conread position: 228-506
Cow position: chr26:6865286-6865005 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 81, 20

Conread position: 228-513
Cow position: chr26:34581043-34580775 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 264, 26

Conread position: 229-434
Cow position: chr26:10219995-10220182 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 198, 16

Conread position: 229-442
Cow position: chr26:33691236-33691448 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 17

Conread position: 229-500
Cow position: chr26:20349866-20349604 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 254, 97

Conread position: 229-514
Cow position: chr26:26293951-26294225 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 229-515
Cow position: chr26:6269328-6269045 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 197, 16

Conread position: 229-516
Cow position: chr26:3707029-3706764 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 18

Conread position: 230-492
Cow position: chr26:32655380-32655614 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 155, 18

Conread position: 230-516
Cow position: chr26:830041-829772 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 263, 18

Conread position: 231-509
Cow position: chr26:6714070-6714324 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 67

Conread position: 233-368
Cow position: chr26:2702954-2703085 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 85

Conread position: 233-516
Cow position: chr26:7314867-7315135 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 233-516
Cow position: chr26:24453685-24453937 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 263, 13

Conread position: 234-441
Cow position: chr26:4385853-4386064 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 14

Conread position: 234-492
Cow position: chr26:17398801-17398571 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 44

Conread position: 235-413
Cow position: chr26:21311693-21311855 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 235-449
Cow position: chr26:32825761-32825967 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 113, 11

Conread position: 235-452
Cow position: chr26:31062650-31062445 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 32

Conread position: 235-497
Cow position: chr26:32553935-32553677 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 164, 11

Conread position: 235-498
Cow position: chr26:33201832-33202081 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 33

Conread position: 235-514
Cow position: chr26:32518701-32518442 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 162, 10

Conread position: 235-514
Cow position: chr26:32571543-32571267 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 236-408
Cow position: chr26:28224682-28224521 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 9

Conread position: 236-462
Cow position: chr26:6823382-6823178 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 215, 49

Conread position: 236-500
Cow position: chr26:12964459-12964707 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 237-516
Cow position: chr26:25394262-25394000 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 215, 8

Conread position: 237-516
Cow position: chr26:30254396-30254660 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 238-433
Cow position: chr26:22713437-22713236 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 48

Conread position: 238-449
Cow position: chr26:28759568-28759787 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 37

Conread position: 238-489
Cow position: chr26:33526779-33527016 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 238-516
Cow position: chr26:13020897-13021176 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 165

Conread position: 239-448
Cow position: chr26:13705549-13705743 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 239-492
Cow position: chr26:16435431-16435661 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 239-501
Cow position: chr26:19774055-19774314 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 161

Conread position: 239-516
Cow position: chr26:13818667-13818392 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 38

Conread position: 240-514
Cow position: chr26:9839326-9839568 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 241-514
Cow position: chr26:6037204-6037464 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 77

Conread position: 242-498
Cow position: chr26:677744-677991 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 242-516
Cow position: chr26:32834357-32834605 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 250, 76

Conread position: 244-449
Cow position: chr26:35397347-35397154 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 246-516
Cow position: chr26:32601568-32601321 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 247, 71

Conread position: 247-483
Cow position: chr26:25197090-25197312 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 176, 75

Conread position: 247-501
Cow position: chr26:14175505-14175266 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 242, 27

Conread position: 248-500
Cow position: chr26:34154380-34154121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 53

Conread position: 251-453
Cow position: chr26:9684583-9684393 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 110, 62

Conread position: 253-447
Cow position: chr26:32381733-32381550 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 256-502
Cow position: chr26:33242113-33241874 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 256-516
Cow position: chr26:10965383-10965624 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 78

Conread position: 257-516
Cow position: chr26:33745116-33744873 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 230, 10

Conread position: 263-511
Cow position: chr26:2739242-2739485 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 125, 70

Conread position: 277-450
Cow position: chr26:20449435-20449275 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 278-516
Cow position: chr26:32776315-32776538 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 216, 44

Conread position: 280-423
Cow position: chr26:34040736-34040604 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 284-497
Cow position: chr26:7157411-7157616 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 105, 33

Conread position: 287-437
Cow position: chr26:24472412-24472260 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 75

Conread position: 302-516
Cow position: chr26:22354588-22354383 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 36

Conread position: 303-448
Cow position: chr26:32353545-32353686 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 303-491
Cow position: chr26:19671654-19671474 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 28

Conread position: 303-492
Cow position: chr26:4854720-4854540 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 13

Conread position: 303-516
Cow position: chr26:4167173-4167384 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 13

Conread position: 303-516
Cow position: chr26:11371084-11370881 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 190, 28

Conread position: 304-494
Cow position: chr26:23599621-23599805 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 87

Conread position: 309-461
Cow position: chr26:7183824-7183975 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 309-516
Cow position: chr26:9104108-9104312 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 311-499
Cow position: chr26:29663983-29664171 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 91

Conread position: 312-516
Cow position: chr26:11263807-11263611 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 181, 86

Conread position: 314-514
Cow position: chr26:9099366-9099561 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 20

Conread position: 317-516
Cow position: chr26:8699882-8700078 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 83

Conread position: 318-511
Cow position: chr26:8353131-8352944 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 30

Conread position: 321-501
Cow position: chr26:28374280-28374457 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 80

Conread position: 325-498
Cow position: chr26:33392551-33392384 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 65

Conread position: 325-516
Cow position: chr26:32836395-32836210 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 327-443
Cow position: chr26:5407132-5407018 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 327-506
Cow position: chr26:11538685-11538514 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 24

Conread position: 331-451
Cow position: chr26:26245021-26245140 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 56

Conread position: 331-511
Cow position: chr26:33253167-33253338 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 331-513
Cow position: chr26:34060485-34060306 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 70

Conread position: 331-516
Cow position: chr26:4585064-4585239 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 331-516
Cow position: chr26:4807705-4807531 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 45

Conread position: 331-516
Cow position: chr26:6794299-6794116 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 17

Conread position: 331-516
Cow position: chr26:31633879-31633698 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 69

Conread position: 331-516
Cow position: chr26:32830231-32830052 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 55

Conread position: 332-484
Cow position: chr26:9501858-9501712 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 70

Conread position: 332-516
Cow position: chr26:32672279-32672467 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 128, 66

Conread position: 334-481
Cow position: chr26:16796064-16796200 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 334-501
Cow position: chr26:19459840-19459680 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 11

Conread position: 334-509
Cow position: chr26:5168541-5168375 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 65

Conread position: 334-516
Cow position: chr26:5836669-5836851 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 69

Conread position: 334-516
Cow position: chr26:12893281-12893456 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 9

Conread position: 334-516
Cow position: chr26:16922084-16921908 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 13

Conread position: 334-516
Cow position: chr26:25526395-25526216 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 16

Conread position: 335-512
Cow position: chr26:17057824-17057653 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 13

Conread position: 338-516
Cow position: chr26:8202996-8202821 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 35

Conread position: 339-516
Cow position: chr26:22348869-22349044 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 60

Conread position: 339-516
Cow position: chr26:25074859-25074687 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 59

Conread position: 339-516
Cow position: chr26:35449204-35449029 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 9

Conread position: 340-516
Cow position: chr26:33011529-33011698 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 153, 60

Conread position: 341-515
Cow position: chr26:613534-613707 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 7

Conread position: 352-516
Cow position: chr26:12237900-12238061 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 141, 46

Conread position: 354-504
Cow position: chr26:1325884-1325741 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 354-516
Cow position: chr26:18876835-18876988 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 363-516
Cow position: chr26:17186920-17187064 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 36

Show alignments to all cow chromosomes.