Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 209-498
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 129, 9

Conread position: 212-500
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 136, 83

Conread position: 225-448
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 226-516
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 61

Conread position: 227-516
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 42

Conread position: 228-445
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 173

Conread position: 228-498
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 23

Conread position: 228-516
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 234, 20

Conread position: 229-367
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 94

Conread position: 229-421
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 229-442
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 25

Conread position: 229-448
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 229-449
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 16

Conread position: 229-459
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 220, 15

Conread position: 229-498
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 229-501
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 229-505
Cow position:
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 21

Conread position: 229-512
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 229-512
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 267, 25

Conread position: 229-513
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 124

Conread position: 229-516
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 230-420
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 15

Conread position: 230-515
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 24

Conread position: 231-414
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 231-449
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 0

Conread position: 233-434
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 52

Conread position: 233-500
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 234-472
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 10

Conread position: 234-497
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 114, 124

Conread position: 234-504
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 75, 12

Conread position: 234-516
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 262, 74

Conread position: 234-516
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 60

Conread position: 235-449
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 113, 9

Conread position: 235-492
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 11

Conread position: 236-449
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 107

Conread position: 236-491
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 236-499
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 72

Conread position: 236-515
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 73

Conread position: 237-445
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 8

Conread position: 237-456
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 87

Conread position: 237-483
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 237-516
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 79

Conread position: 238-407
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 82

Conread position: 238-449
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 238-516
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 131

Conread position: 238-516
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 238-516
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 102, 164

Conread position: 239-429
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 239-460
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 193, 82

Conread position: 239-466
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 239-497
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 21

Conread position: 239-498
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 239-505
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 257, 74

Conread position: 239-516
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 71, 172

Conread position: 239-516
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 181

Conread position: 240-445
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 242-499
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 134

Conread position: 242-516
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 244-516
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 145, 60

Conread position: 246-447
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 69

Conread position: 246-516
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 247-425
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 145

Conread position: 247-440
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 247-516
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 11

Conread position: 247-516
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 101

Conread position: 248-503
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 157

Conread position: 250-498
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 253-516
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 64

Conread position: 254-481
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 254-498
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 69

Conread position: 255-516
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 171, 145

Conread position: 257-445
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 18

Conread position: 259-516
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 63

Conread position: 266-492
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 273-463
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 128

Conread position: 280-514
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 122

Conread position: 280-516
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 130

Conread position: 286-516
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 20

Conread position: 303-448
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 13

Conread position: 303-490
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 25

Conread position: 303-504
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 31

Conread position: 303-516
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 190, 13

Conread position: 303-516
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 188, 13

Conread position: 303-516
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 100

Conread position: 303-516
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 13

Conread position: 307-444
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 93

Conread position: 309-485
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 310-510
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 184, 38

Conread position: 311-449
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 22

Conread position: 313-509
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 74

Conread position: 314-499
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 20

Conread position: 318-496
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 318-501
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 42

Conread position: 318-516
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 84

Conread position: 320-501
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 14

Conread position: 325-514
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 75

Conread position: 325-516
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 9

Conread position: 325-516
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 168, 69

Conread position: 325-516
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 169, 23

Conread position: 325-516
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 76

Conread position: 326-516
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 327-516
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 23

Conread position: 329-498
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 71

Conread position: 331-449
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 68

Conread position: 331-501
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 55

Conread position: 331-516
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 25

Conread position: 331-516
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 41

Conread position: 331-516
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 55

Conread position: 331-516
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 73

Conread position: 332-516
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 53

Conread position: 334-461
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 14

Conread position: 334-493
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 56

Conread position: 334-498
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 334-501
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 66

Conread position: 334-516
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 334-516
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 156, 23

Conread position: 334-516
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 162, 17

Conread position: 335-441
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 335-498
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 61

Conread position: 335-500
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 335-515
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 335-516
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 22

Conread position: 335-516
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 65

Conread position: 335-516
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 335-516
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 158, 66

Conread position: 336-504
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 63

Conread position: 336-513
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 12

Conread position: 336-516
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 48

Conread position: 337-516
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 62

Conread position: 338-514
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 61

Conread position: 339-516
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 25

Conread position: 340-501
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 60

Conread position: 344-506
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 142, 55

Conread position: 347-498
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 347-500
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 53

Conread position: 347-516
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 155, 50

Conread position: 347-516
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 51

Conread position: 359-516
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 139, 40

Conread position: 360-516
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 39

Conread position: 360-516
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 39

Conread position: 370-516
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 29

Show alignments to all cow chromosomes.