Cow genome map
| Conread name: | Ss1.1-rspc008_d12.5 |
| Conread position: | 209-498 |
| Cow position: | chr27:27270843-27270557 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 212-500 |
| Cow position: | chr27:2592263-2592530 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 136, 83 |
| Conread position: | 225-448 |
| Cow position: | chr27:7212990-7212774 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 226-516 |
| Cow position: | chr27:31147963-31147666 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 227-516 |
| Cow position: | chr27:11561515-11561780 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 228-445 |
| Cow position: | chr27:19823050-19823278 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 228-498 |
| Cow position: | chr27:815076-815348 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 228-516 |
| Cow position: | chr27:24228061-24227790 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 234, 20 |
| Conread position: | 229-367 |
| Cow position: | chr27:22708739-22708875 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 229-421 |
| Cow position: | chr27:20485788-20485969 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 229-442 |
| Cow position: | chr27:22181805-22182009 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 160, 25 |
| Conread position: | 229-448 |
| Cow position: | chr27:18752591-18752795 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 229-449 |
| Cow position: | chr27:28290586-28290802 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 229-459 |
| Cow position: | chr27:13801550-13801762 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 220, 15 |
| Conread position: | 229-498 |
| Cow position: | chr27:20336831-20337080 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 229-501 |
| Cow position: | chr27:31170327-31170078 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 229-505 |
| Cow position: | chr27:16088535-16088799 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 21 |
| Conread position: | 229-512 |
| Cow position: | chr27:24303687-24303941 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 229-512 |
| Cow position: | chr27:29185101-29184838 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 267, 25 |
| Conread position: | 229-513 |
| Cow position: | chr27:18826269-18826554 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 124 |
| Conread position: | 229-516 |
| Cow position: | chr27:30914751-30915011 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 230-420 |
| Cow position: | chr27:26321418-26321614 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 230-515 |
| Cow position: | chr27:30988519-30988799 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 231-414 |
| Cow position: | chr27:13982293-13982466 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 231-449 |
| Cow position: | chr27:27255712-27255928 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 233-434 |
| Cow position: | chr27:7448333-7448136 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 233-500 |
| Cow position: | chr27:1353329-1353569 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 234-472 |
| Cow position: | chr27:26413528-26413289 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 234-497 |
| Cow position: | chr27:18767334-18767081 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 114, 124 |
| Conread position: | 234-504 |
| Cow position: | chr27:28035125-28034859 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 234-516 |
| Cow position: | chr27:20584719-20584453 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 262, 74 |
| Conread position: | 234-516 |
| Cow position: | chr27:27136790-27136515 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 60 |
| Conread position: | 235-449 |
| Cow position: | chr27:29658988-29658775 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 113, 9 |
| Conread position: | 235-492 |
| Cow position: | chr27:29319155-29319389 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 236-449 |
| Cow position: | chr27:17919000-17918777 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 236-491 |
| Cow position: | chr27:237002-237246 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 236-499 |
| Cow position: | chr27:29693217-29693464 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 128, 72 |
| Conread position: | 236-515 |
| Cow position: | chr27:29831958-29831695 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 132, 73 |
| Conread position: | 237-445 |
| Cow position: | chr27:22153591-22153795 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 237-456 |
| Cow position: | chr27:28039106-28038897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 237-483 |
| Cow position: | chr27:4720374-4720140 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 237-516 |
| Cow position: | chr27:30869001-30868736 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 238-407 |
| Cow position: | chr27:30803935-30804100 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 238-449 |
| Cow position: | chr27:27531876-27532078 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 238-516 |
| Cow position: | chr27:6014923-6015207 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 238-516 |
| Cow position: | chr27:6550213-6550461 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 238-516 |
| Cow position: | chr27:18923107-18922826 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 102, 164 |
| Conread position: | 239-429 |
| Cow position: | chr27:23489122-23488940 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 239-460 |
| Cow position: | chr27:18749167-18748956 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 239-466 |
| Cow position: | chr27:21951227-21951021 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 239-497 |
| Cow position: | chr27:789054-788812 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 239-498 |
| Cow position: | chr27:16589970-16589718 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 239-505 |
| Cow position: | chr27:19546768-19546522 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 257, 74 |
| Conread position: | 239-516 |
| Cow position: | chr27:15214947-15215237 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 71, 172 |
| Conread position: | 239-516 |
| Cow position: | chr27:27673305-27673017 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 181 |
| Conread position: | 240-445 |
| Cow position: | chr27:22267975-22268165 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 242-499 |
| Cow position: | chr27:27641280-27641027 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 242-516 |
| Cow position: | chr27:26794028-26793783 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 244-516 |
| Cow position: | chr27:24331472-24331725 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 246-447 |
| Cow position: | chr27:28541375-28541174 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 69 |
| Conread position: | 246-516 |
| Cow position: | chr27:25151849-25152086 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 247-425 |
| Cow position: | chr27:5574016-5573836 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 247-440 |
| Cow position: | chr27:19717659-19717846 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 247-516 |
| Cow position: | chr27:15343542-15343276 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 247-516 |
| Cow position: | chr27:28467708-28467446 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 121, 101 |
| Conread position: | 248-503 |
| Cow position: | chr27:20275313-20275582 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 157 |
| Conread position: | 250-498 |
| Cow position: | chr27:7731510-7731273 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 253-516 |
| Cow position: | chr27:2644331-2644087 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 254-481 |
| Cow position: | chr27:19452767-19452969 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 254-498 |
| Cow position: | chr27:30489660-30489424 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 255-516 |
| Cow position: | chr27:28245550-28245804 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 171, 145 |
| Conread position: | 257-445 |
| Cow position: | chr27:20795542-20795730 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 259-516 |
| Cow position: | chr27:22455020-22454774 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 89, 63 |
| Conread position: | 266-492 |
| Cow position: | chr27:6674048-6674257 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 273-463 |
| Cow position: | chr27:27614003-27614199 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 280-514 |
| Cow position: | chr27:8942920-8942681 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 280-516 |
| Cow position: | chr27:4386301-4386057 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 286-516 |
| Cow position: | chr27:27064662-27064435 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 303-448 |
| Cow position: | chr27:18491354-18491495 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 303-490 |
| Cow position: | chr27:29388468-29388648 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 303-504 |
| Cow position: | chr27:13411572-13411375 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 303-516 |
| Cow position: | chr27:15865406-15865615 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 190, 13 |
| Conread position: | 303-516 |
| Cow position: | chr27:16705049-16705256 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 188, 13 |
| Conread position: | 303-516 |
| Cow position: | chr27:26112122-26111906 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 303-516 |
| Cow position: | chr27:26188623-26188834 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 307-444 |
| Cow position: | chr27:20543518-20543655 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 309-485 |
| Cow position: | chr27:22723892-22723722 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 310-510 |
| Cow position: | chr27:6302664-6302470 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 184, 38 |
| Conread position: | 311-449 |
| Cow position: | chr27:19576520-19576383 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 313-509 |
| Cow position: | chr27:30455797-30455988 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 314-499 |
| Cow position: | chr27:15315327-15315504 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 318-496 |
| Cow position: | chr27:30908483-30908654 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 318-501 |
| Cow position: | chr27:4155809-4155982 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 318-516 |
| Cow position: | chr27:15642984-15643175 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 320-501 |
| Cow position: | chr27:28931991-28931809 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 325-514 |
| Cow position: | chr27:29593812-29593626 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 325-516 |
| Cow position: | chr27:17918498-17918311 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 325-516 |
| Cow position: | chr27:19660749-19660939 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 168, 69 |
| Conread position: | 325-516 |
| Cow position: | chr27:22560005-22559820 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 169, 23 |
| Conread position: | 325-516 |
| Cow position: | chr27:30359223-30359412 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 326-516 |
| Cow position: | chr27:31018006-31017829 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 327-516 |
| Cow position: | chr27:13318154-13317973 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 329-498 |
| Cow position: | chr27:10992176-10992337 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 331-449 |
| Cow position: | chr27:6522638-6522757 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 331-501 |
| Cow position: | chr27:5553292-5553456 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 331-516 |
| Cow position: | chr27:7935333-7935154 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 331-516 |
| Cow position: | chr27:7974000-7974178 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 331-516 |
| Cow position: | chr27:11982823-11982644 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 331-516 |
| Cow position: | chr27:25809695-25809517 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 332-516 |
| Cow position: | chr27:15925170-15925345 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 334-461 |
| Cow position: | chr27:26400894-26400768 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 334-493 |
| Cow position: | chr27:1789313-1789160 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 334-498 |
| Cow position: | chr27:16512345-16512187 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 334-501 |
| Cow position: | chr27:26437296-26437134 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 334-516 |
| Cow position: | chr27:14303564-14303738 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 334-516 |
| Cow position: | chr27:17646341-17646163 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 156, 23 |
| Conread position: | 334-516 |
| Cow position: | chr27:20812732-20812910 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 335-441 |
| Cow position: | chr27:23495880-23495777 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 335-498 |
| Cow position: | chr27:18435307-18435149 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 335-500 |
| Cow position: | chr27:17397626-17397468 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 335-515 |
| Cow position: | chr27:6541460-6541632 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 335-516 |
| Cow position: | chr27:1291022-1290846 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 335-516 |
| Cow position: | chr27:15867216-15867401 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 335-516 |
| Cow position: | chr27:22423343-22423514 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 335-516 |
| Cow position: | chr27:25276970-25277145 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 158, 66 |
| Conread position: | 336-504 |
| Cow position: | chr27:31386804-31386640 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 336-513 |
| Cow position: | chr27:23929798-23929977 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 12 |
| Conread position: | 336-516 |
| Cow position: | chr27:16231110-16230932 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 337-516 |
| Cow position: | chr27:28260707-28260533 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 338-514 |
| Cow position: | chr27:24371072-24371240 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 339-516 |
| Cow position: | chr27:20283468-20283646 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 340-501 |
| Cow position: | chr27:9977514-9977674 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 344-506 |
| Cow position: | chr27:21393671-21393512 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 142, 55 |
| Conread position: | 347-498 |
| Cow position: | chr27:8790904-8790757 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 347-500 |
| Cow position: | chr27:12191640-12191492 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 347-516 |
| Cow position: | chr27:1637096-1636931 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 155, 50 |
| Conread position: | 347-516 |
| Cow position: | chr27:20901400-20901573 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 359-516 |
| Cow position: | chr27:30354493-30354339 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 139, 40 |
| Conread position: | 360-516 |
| Cow position: | chr27:18593125-18593273 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 39 |
| Conread position: | 360-516 |
| Cow position: | chr27:20497058-20497215 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 370-516 |
| Cow position: | chr27:62520-62668 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 29 |
Show alignments to all cow chromosomes.