Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 218-506
Cow position:
Alignm length: 290
Alignm identity: 180
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 198, 9

Conread position: 227-465
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 48

Conread position: 227-466
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 12

Conread position: 227-485
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 61

Conread position: 227-516
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 21

Conread position: 228-430
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 97

Conread position: 228-449
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 66

Conread position: 228-462
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 66

Conread position: 229-434
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 229-462
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 10

Conread position: 229-501
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 229-501
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 160, 18

Conread position: 229-515
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 164, 16

Conread position: 229-516
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 25

Conread position: 229-516
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 230-516
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 166

Conread position: 232-516
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 88

Conread position: 233-408
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 171

Conread position: 233-499
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 151, 21

Conread position: 233-516
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 39

Conread position: 234-449
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 190, 16

Conread position: 234-515
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 114, 12

Conread position: 234-516
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 259, 11

Conread position: 235-449
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 77

Conread position: 235-449
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 235-506
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 235-511
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 35

Conread position: 235-516
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 13

Conread position: 236-411
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 238-429
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 119, 12

Conread position: 238-444
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 76, 36

Conread position: 238-448
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 39

Conread position: 238-449
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 238-502
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 238-516
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 39

Conread position: 239-448
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 239-454
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 165

Conread position: 239-483
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 239-498
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 38

Conread position: 239-516
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 109, 36

Conread position: 240-516
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 253, 107

Conread position: 241-419
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 241-516
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 242-432
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 242-449
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 242-462
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 209, 12

Conread position: 242-515
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 33

Conread position: 244-516
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 35

Conread position: 246-516
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 112

Conread position: 247-502
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 255-445
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 59

Conread position: 255-461
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 50

Conread position: 256-449
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 66

Conread position: 256-515
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 238, 61

Conread position: 263-516
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 228, 27

Conread position: 272-496
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 273-516
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 8

Conread position: 300-516
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 16

Conread position: 302-516
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 191, 45

Conread position: 302-516
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 302-516
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 87

Conread position: 303-491
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 303-498
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 45

Conread position: 303-505
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 13

Conread position: 303-516
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 101

Conread position: 303-516
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 13

Conread position: 303-516
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 303-516
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 13

Conread position: 303-516
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 191, 13

Conread position: 304-490
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 12

Conread position: 307-511
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 58

Conread position: 308-516
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 94

Conread position: 309-449
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 93

Conread position: 309-449
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 49

Conread position: 309-449
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 49

Conread position: 309-462
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 29

Conread position: 309-501
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 93

Conread position: 309-509
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 5

Conread position: 309-515
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 14

Conread position: 309-516
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 48

Conread position: 309-516
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 91

Conread position: 309-516
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 91

Conread position: 310-516
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 311-429
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 311-499
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 182, 23

Conread position: 311-500
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 312-503
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 38

Conread position: 313-447
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 313-510
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 37

Conread position: 314-493
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 21

Conread position: 314-500
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 20

Conread position: 314-501
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 182, 22

Conread position: 322-483
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 53

Conread position: 325-453
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 325-515
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 69

Conread position: 325-516
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 171, 73

Conread position: 326-516
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 326-516
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 74

Conread position: 327-499
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 19

Conread position: 327-501
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 21

Conread position: 327-512
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 327-516
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 71

Conread position: 327-516
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 328-516
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 71

Conread position: 329-501
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 19

Conread position: 331-461
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 331-509
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 68

Conread position: 331-516
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 165, 70

Conread position: 331-516
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 170, 17

Conread position: 332-502
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 16

Conread position: 333-509
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 66

Conread position: 333-509
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 66

Conread position: 333-516
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 158, 15

Conread position: 334-502
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 65

Conread position: 334-503
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 66

Conread position: 334-508
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 51

Conread position: 334-516
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 334-516
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 14

Conread position: 334-516
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 11

Conread position: 337-445
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 338-484
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 338-500
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 62

Conread position: 338-516
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 62

Conread position: 339-498
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 60

Conread position: 339-501
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 61

Conread position: 339-501
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 60

Conread position: 339-516
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 61

Conread position: 339-516
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 60

Conread position: 339-516
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 61

Conread position: 341-516
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 58

Conread position: 344-506
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 28

Conread position: 345-516
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 55

Conread position: 346-452
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 347-516
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 51

Conread position: 347-516
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 350-516
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 49

Conread position: 352-504
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 46

Conread position: 356-516
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 11

Show alignments to all cow chromosomes.