Cow genome map
| Conread name: | Ss1.1-rspc008_d12.5 |
| Conread position: | 218-506 |
| Cow position: | chr28:22182907-22183177 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 198, 9 |
| Conread position: | 227-465 |
| Cow position: | chr28:5152836-5152607 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 227-466 |
| Cow position: | chr28:6255421-6255176 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 227-485 |
| Cow position: | chr28:19038797-19039029 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 227-516 |
| Cow position: | chr28:3725989-3726256 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 228-430 |
| Cow position: | chr28:11115328-11115126 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 97 |
| Conread position: | 228-449 |
| Cow position: | chr28:118834-118630 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 228-462 |
| Cow position: | chr28:117538-117756 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 229-434 |
| Cow position: | chr28:5774136-5773926 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 229-462 |
| Cow position: | chr28:2743333-2743088 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 229-501 |
| Cow position: | chr28:5630316-5630072 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 229-501 |
| Cow position: | chr28:21103605-21103852 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 160, 18 |
| Conread position: | 229-515 |
| Cow position: | chr28:5200043-5199781 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 229-516 |
| Cow position: | chr28:3449526-3449259 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 229-516 |
| Cow position: | chr28:5144297-5144562 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 230-516 |
| Cow position: | chr28:8408977-8408692 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 17, 166 |
| Conread position: | 232-516 |
| Cow position: | chr28:20759476-20759744 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 233-408 |
| Cow position: | chr28:8099830-8100010 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 171 |
| Conread position: | 233-499 |
| Cow position: | chr28:10495087-10495323 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 151, 21 |
| Conread position: | 233-516 |
| Cow position: | chr28:33052272-33051989 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 234-449 |
| Cow position: | chr28:6053496-6053292 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 190, 16 |
| Conread position: | 234-515 |
| Cow position: | chr28:5365888-5366188 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 114, 12 |
| Conread position: | 234-516 |
| Cow position: | chr28:4873113-4873391 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 259, 11 |
| Conread position: | 235-449 |
| Cow position: | chr28:9418735-9418945 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 235-449 |
| Cow position: | chr28:12964794-12964591 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 235-506 |
| Cow position: | chr28:7371898-7372151 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 235-511 |
| Cow position: | chr28:32179911-32179653 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 235-516 |
| Cow position: | chr28:26220491-26220213 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 236-411 |
| Cow position: | chr28:5724930-5725089 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 238-429 |
| Cow position: | chr28:23641032-23641224 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 238-444 |
| Cow position: | chr28:8259069-8258850 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 238-448 |
| Cow position: | chr28:9430499-9430704 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 39 |
| Conread position: | 238-449 |
| Cow position: | chr28:3137762-3137564 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 238-502 |
| Cow position: | chr28:2960607-2960858 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 238-516 |
| Cow position: | chr28:27161107-27161370 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 239-448 |
| Cow position: | chr28:5245565-5245378 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 239-454 |
| Cow position: | chr28:13232878-13233105 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 165 |
| Conread position: | 239-483 |
| Cow position: | chr28:24064684-24064903 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 239-498 |
| Cow position: | chr28:5867949-5867704 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 239-516 |
| Cow position: | chr28:2752268-2752537 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 109, 36 |
| Conread position: | 240-516 |
| Cow position: | chr28:29434200-29434472 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 253, 107 |
| Conread position: | 241-419 |
| Cow position: | chr28:7532365-7532536 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 241-516 |
| Cow position: | chr28:17012099-17012334 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 242-432 |
| Cow position: | chr28:25518551-25518727 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 242-449 |
| Cow position: | chr28:19024655-19024454 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 242-462 |
| Cow position: | chr28:6322023-6321824 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 209, 12 |
| Conread position: | 242-515 |
| Cow position: | chr28:33301616-33301340 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 244-516 |
| Cow position: | chr28:11817739-11818009 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 246-516 |
| Cow position: | chr28:25806798-25806530 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 247-502 |
| Cow position: | chr28:18770287-18770057 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 255-445 |
| Cow position: | chr28:20013644-20013460 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 255-461 |
| Cow position: | chr28:26269591-26269392 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 50 |
| Conread position: | 256-449 |
| Cow position: | chr28:4035015-4034824 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 256-515 |
| Cow position: | chr28:26743822-26743583 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 238, 61 |
| Conread position: | 263-516 |
| Cow position: | chr28:1632461-1632694 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 228, 27 |
| Conread position: | 272-496 |
| Cow position: | chr28:2899173-2898968 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 273-516 |
| Cow position: | chr28:18354136-18354366 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 300-516 |
| Cow position: | chr28:10958967-10958752 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 302-516 |
| Cow position: | chr28:19025841-19026052 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 191, 45 |
| Conread position: | 302-516 |
| Cow position: | chr28:23296485-23296282 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 302-516 |
| Cow position: | chr28:31109833-31110046 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 303-491 |
| Cow position: | chr28:21008505-21008681 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 303-498 |
| Cow position: | chr28:17680790-17680599 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 303-505 |
| Cow position: | chr28:5818003-5817807 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 303-516 |
| Cow position: | chr28:4307728-4307946 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 303-516 |
| Cow position: | chr28:5236039-5235839 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 303-516 |
| Cow position: | chr28:7008816-7009019 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 303-516 |
| Cow position: | chr28:7697814-7698022 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 303-516 |
| Cow position: | chr28:11866503-11866709 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 191, 13 |
| Conread position: | 304-490 |
| Cow position: | chr28:13048117-13048298 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 307-511 |
| Cow position: | chr28:34247867-34248066 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 308-516 |
| Cow position: | chr28:20313441-20313233 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 309-449 |
| Cow position: | chr28:8102784-8102924 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 309-449 |
| Cow position: | chr28:11365368-11365506 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 309-449 |
| Cow position: | chr28:18533746-18533885 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 309-462 |
| Cow position: | chr28:29041896-29042047 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 309-501 |
| Cow position: | chr28:19079684-19079870 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 309-509 |
| Cow position: | chr28:13474458-13474270 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 309-515 |
| Cow position: | chr28:7388613-7388808 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 309-516 |
| Cow position: | chr28:4841231-4841441 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 309-516 |
| Cow position: | chr28:17398073-17398270 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 309-516 |
| Cow position: | chr28:17414314-17414511 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 310-516 |
| Cow position: | chr28:8147706-8147904 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 311-429 |
| Cow position: | chr28:24726281-24726396 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 311-499 |
| Cow position: | chr28:7267790-7267968 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 182, 23 |
| Conread position: | 311-500 |
| Cow position: | chr28:10053170-10053354 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 312-503 |
| Cow position: | chr28:20173991-20173808 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 313-447 |
| Cow position: | chr28:12385139-12385270 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 313-510 |
| Cow position: | chr28:6935024-6935220 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 314-493 |
| Cow position: | chr28:10615791-10615964 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 314-500 |
| Cow position: | chr28:4013239-4013059 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 314-501 |
| Cow position: | chr28:25677188-25677369 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 182, 22 |
| Conread position: | 322-483 |
| Cow position: | chr28:2131776-2131932 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 325-453 |
| Cow position: | chr28:9927758-9927883 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 325-515 |
| Cow position: | chr28:25400014-25399831 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 325-516 |
| Cow position: | chr28:19222007-19222193 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 171, 73 |
| Conread position: | 326-516 |
| Cow position: | chr28:4823744-4823564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 326-516 |
| Cow position: | chr28:17601410-17601595 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 327-499 |
| Cow position: | chr28:3011129-3011293 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 327-501 |
| Cow position: | chr28:11307376-11307545 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 327-512 |
| Cow position: | chr28:8149491-8149665 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 327-516 |
| Cow position: | chr28:15601417-15601233 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 162, 71 |
| Conread position: | 327-516 |
| Cow position: | chr28:26982597-26982779 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 328-516 |
| Cow position: | chr28:32174771-32174587 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 329-501 |
| Cow position: | chr28:2077639-2077464 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 331-461 |
| Cow position: | chr28:8167217-8167344 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 331-509 |
| Cow position: | chr28:17739961-17739790 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 331-516 |
| Cow position: | chr28:20397232-20397413 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 331-516 |
| Cow position: | chr28:25728330-25728157 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 170, 17 |
| Conread position: | 332-502 |
| Cow position: | chr28:4355682-4355518 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 333-509 |
| Cow position: | chr28:11987308-11987139 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 333-509 |
| Cow position: | chr28:12055546-12055377 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 333-516 |
| Cow position: | chr28:11559497-11559678 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 158, 15 |
| Conread position: | 334-502 |
| Cow position: | chr28:5204331-5204166 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 334-503 |
| Cow position: | chr28:7350790-7350626 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 334-508 |
| Cow position: | chr28:11346352-11346520 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 334-516 |
| Cow position: | chr28:4881106-4881279 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 334-516 |
| Cow position: | chr28:5650604-5650780 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 334-516 |
| Cow position: | chr28:28765769-28765947 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 160, 11 |
| Conread position: | 337-445 |
| Cow position: | chr28:26784110-26784216 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 338-484 |
| Cow position: | chr28:18797449-18797311 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 338-500 |
| Cow position: | chr28:21355363-21355206 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 338-516 |
| Cow position: | chr28:25249486-25249312 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 339-498 |
| Cow position: | chr28:3143747-3143898 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 339-501 |
| Cow position: | chr28:12991273-12991108 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 339-501 |
| Cow position: | chr28:19216952-19216797 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 339-516 |
| Cow position: | chr28:662238-662064 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 339-516 |
| Cow position: | chr28:23410192-23410367 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 339-516 |
| Cow position: | chr28:30746599-30746771 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 341-516 |
| Cow position: | chr28:4765804-4765633 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 344-506 |
| Cow position: | chr28:10247613-10247454 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 345-516 |
| Cow position: | chr28:23007606-23007776 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 149, 55 |
| Conread position: | 346-452 |
| Cow position: | chr28:16692046-16691941 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 347-516 |
| Cow position: | chr28:5166889-5166724 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 147, 51 |
| Conread position: | 347-516 |
| Cow position: | chr28:26922246-26922409 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 350-516 |
| Cow position: | chr28:6059351-6059513 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 49 |
| Conread position: | 352-504 |
| Cow position: | chr28:26719460-26719313 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 46 |
| Conread position: | 356-516 |
| Cow position: | chr28:32365956-32365800 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 11 |
Show alignments to all cow chromosomes.