Cow genome map
| Conread name: | Ss1.1-rspc008_d12.5 |
| Conread position: | 211-516 |
| Cow position: | chr29:30366824-30367107 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 223-516 |
| Cow position: | chr29:25475148-25474871 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 161, 32 |
| Conread position: | 228-495 |
| Cow position: | chr29:39329373-39329630 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 228-516 |
| Cow position: | chr29:13373534-13373250 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 229-429 |
| Cow position: | chr29:28733899-28734106 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 229-445 |
| Cow position: | chr29:18579607-18579821 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 119, 84 |
| Conread position: | 229-449 |
| Cow position: | chr29:17022394-17022164 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 180 |
| Conread position: | 229-487 |
| Cow position: | chr29:11527558-11527808 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 229-487 |
| Cow position: | chr29:12680371-12680137 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 229-511 |
| Cow position: | chr29:11647326-11647052 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 119, 82 |
| Conread position: | 229-516 |
| Cow position: | chr29:16196066-16195793 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 264, 26 |
| Conread position: | 229-516 |
| Cow position: | chr29:23874673-23874408 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 264, 25 |
| Conread position: | 229-516 |
| Cow position: | chr29:32799493-32799757 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 265, 16 |
| Conread position: | 230-366 |
| Cow position: | chr29:9880205-9880076 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 230-515 |
| Cow position: | chr29:11397703-11397972 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 230-516 |
| Cow position: | chr29:22175901-22175638 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 232-445 |
| Cow position: | chr29:26672690-26672893 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 233-449 |
| Cow position: | chr29:12858954-12859166 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 233-449 |
| Cow position: | chr29:19742678-19742468 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 233-506 |
| Cow position: | chr29:42760683-42760412 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 234-346 |
| Cow position: | chr29:32302019-32301908 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 234-380 |
| Cow position: | chr29:2623272-2623425 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 234-402 |
| Cow position: | chr29:34600645-34600806 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 234-418 |
| Cow position: | chr29:6033906-6034096 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 171 |
| Conread position: | 234-418 |
| Cow position: | chr29:31942602-31942430 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 234-435 |
| Cow position: | chr29:28840383-28840184 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 234-498 |
| Cow position: | chr29:13028657-13028414 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 234-511 |
| Cow position: | chr29:25333235-25333501 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 234-516 |
| Cow position: | chr29:27668447-27668712 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 260, 83 |
| Conread position: | 234-516 |
| Cow position: | chr29:37618514-37618252 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 155, 20 |
| Conread position: | 235-449 |
| Cow position: | chr29:26764583-26764380 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 236-429 |
| Cow position: | chr29:38605230-38605041 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 236-498 |
| Cow position: | chr29:5994884-5995124 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 224, 34 |
| Conread position: | 236-499 |
| Cow position: | chr29:11042648-11042401 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-516 |
| Cow position: | chr29:2262776-2263042 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 257, 82 |
| Conread position: | 236-516 |
| Cow position: | chr29:19250549-19250298 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 236-516 |
| Cow position: | chr29:38581195-38580928 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 237-444 |
| Cow position: | chr29:24026905-24026712 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 237-451 |
| Cow position: | chr29:30188126-30188339 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 237-501 |
| Cow position: | chr29:683254-683522 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 238-459 |
| Cow position: | chr29:35070870-35071081 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 207, 36 |
| Conread position: | 238-470 |
| Cow position: | chr29:28949188-28948965 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 214, 84 |
| Conread position: | 238-516 |
| Cow position: | chr29:17297341-17297085 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 239-425 |
| Cow position: | chr29:7040666-7040834 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 239-429 |
| Cow position: | chr29:37990785-37990965 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 239-441 |
| Cow position: | chr29:25097047-25096851 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 239-450 |
| Cow position: | chr29:19061560-19061761 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 239-475 |
| Cow position: | chr29:29940870-29940628 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 165 |
| Conread position: | 239-499 |
| Cow position: | chr29:8926248-8926492 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 239-502 |
| Cow position: | chr29:23220288-23220535 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 255, 18 |
| Conread position: | 239-516 |
| Cow position: | chr29:749689-749959 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 240-449 |
| Cow position: | chr29:11562827-11562627 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 240-497 |
| Cow position: | chr29:40298795-40299049 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 108, 161 |
| Conread position: | 240-516 |
| Cow position: | chr29:22518920-22519179 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 253, 35 |
| Conread position: | 241-449 |
| Cow position: | chr29:3590689-3590479 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 241-506 |
| Cow position: | chr29:31200474-31200221 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 242-402 |
| Cow position: | chr29:31476607-31476766 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 242-421 |
| Cow position: | chr29:17301970-17301803 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 242-443 |
| Cow position: | chr29:26631248-26631061 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 242-490 |
| Cow position: | chr29:24187864-24188087 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 242-516 |
| Cow position: | chr29:19756636-19756385 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 203, 32 |
| Conread position: | 242-516 |
| Cow position: | chr29:24252466-24252189 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 167 |
| Conread position: | 242-516 |
| Cow position: | chr29:44378208-44378464 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 255, 73 |
| Conread position: | 244-516 |
| Cow position: | chr29:6844413-6844678 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 155 |
| Conread position: | 246-489 |
| Cow position: | chr29:16365657-16365910 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 247-449 |
| Cow position: | chr29:20579223-20579025 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 247-449 |
| Cow position: | chr29:35737123-35737313 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 30 |
| Conread position: | 247-474 |
| Cow position: | chr29:34760207-34760427 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 247-515 |
| Cow position: | chr29:40097175-40096915 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 247-516 |
| Cow position: | chr29:40994685-40994939 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 249, 63 |
| Conread position: | 247-516 |
| Cow position: | chr29:42771847-42771598 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 246, 68 |
| Conread position: | 248-442 |
| Cow position: | chr29:20177497-20177682 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 248-516 |
| Cow position: | chr29:11705326-11705073 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 248-516 |
| Cow position: | chr29:22936478-22936221 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 142, 14 |
| Conread position: | 255-516 |
| Cow position: | chr29:13866993-13867261 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 257-516 |
| Cow position: | chr29:12783771-12784005 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 258-449 |
| Cow position: | chr29:33393871-33393692 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 272-501 |
| Cow position: | chr29:34688024-34687803 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 276-448 |
| Cow position: | chr29:2533467-2533299 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 277-461 |
| Cow position: | chr29:19187208-19187027 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 280-419 |
| Cow position: | chr29:27042224-27042089 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 280-516 |
| Cow position: | chr29:8004753-8004972 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 214, 39 |
| Conread position: | 302-449 |
| Cow position: | chr29:28559540-28559394 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 303-500 |
| Cow position: | chr29:25737257-25737446 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 303-501 |
| Cow position: | chr29:5520325-5520518 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 303-516 |
| Cow position: | chr29:12025317-12025519 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 303-516 |
| Cow position: | chr29:26017341-26017553 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 303-516 |
| Cow position: | chr29:29057335-29057130 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 304-515 |
| Cow position: | chr29:28775305-28775508 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 305-516 |
| Cow position: | chr29:17222572-17222364 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 308-516 |
| Cow position: | chr29:1022446-1022246 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 180, 43 |
| Conread position: | 309-516 |
| Cow position: | chr29:6293325-6293523 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 310-516 |
| Cow position: | chr29:847493-847692 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 144, 12 |
| Conread position: | 311-516 |
| Cow position: | chr29:26653892-26654089 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 320-501 |
| Cow position: | chr29:44684241-44684069 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 323-495 |
| Cow position: | chr29:25088880-25088719 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 323-516 |
| Cow position: | chr29:27858927-27858743 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 325-437 |
| Cow position: | chr29:2522893-2522782 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 325-439 |
| Cow position: | chr29:18748256-18748366 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 325-449 |
| Cow position: | chr29:16672628-16672505 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 325-498 |
| Cow position: | chr29:42883821-42883989 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 325-516 |
| Cow position: | chr29:6286022-6286207 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 327-435 |
| Cow position: | chr29:17663626-17663733 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 327-462 |
| Cow position: | chr29:629674-629538 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 327-510 |
| Cow position: | chr29:5892981-5892802 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 327-516 |
| Cow position: | chr29:13639230-13639420 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 327-516 |
| Cow position: | chr29:24293003-24292821 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 327-516 |
| Cow position: | chr29:34745525-34745710 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 328-510 |
| Cow position: | chr29:11434252-11434078 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 329-516 |
| Cow position: | chr29:7103692-7103506 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 331-491 |
| Cow position: | chr29:501331-501176 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 331-515 |
| Cow position: | chr29:34744497-34744670 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 331-516 |
| Cow position: | chr29:27911722-27911543 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 331-516 |
| Cow position: | chr29:31929117-31928936 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 331-516 |
| Cow position: | chr29:41530981-41530798 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 332-445 |
| Cow position: | chr29:24051251-24051363 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 332-492 |
| Cow position: | chr29:32926234-32926080 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 332-499 |
| Cow position: | chr29:5210620-5210461 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 334-462 |
| Cow position: | chr29:34359695-34359820 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 334-497 |
| Cow position: | chr29:31934508-31934350 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 334-498 |
| Cow position: | chr29:17110086-17109930 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 334-502 |
| Cow position: | chr29:4423311-4423472 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 334-516 |
| Cow position: | chr29:23825801-23825619 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 65 |
| Conread position: | 335-502 |
| Cow position: | chr29:21196522-21196686 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 157, 65 |
| Conread position: | 335-506 |
| Cow position: | chr29:5769923-5769756 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 335-510 |
| Cow position: | chr29:16657823-16657654 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 335-516 |
| Cow position: | chr29:40853056-40852880 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 336-497 |
| Cow position: | chr29:28979378-28979526 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 336-501 |
| Cow position: | chr29:396531-396381 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 336-514 |
| Cow position: | chr29:32290737-32290561 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 338-498 |
| Cow position: | chr29:35292217-35292062 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 338-504 |
| Cow position: | chr29:4085432-4085275 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 339-501 |
| Cow position: | chr29:31981954-31981797 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 157, 59 |
| Conread position: | 339-510 |
| Cow position: | chr29:7310795-7310635 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 342-516 |
| Cow position: | chr29:28195402-28195562 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 345-516 |
| Cow position: | chr29:11053742-11053908 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 347-501 |
| Cow position: | chr29:5789144-5788996 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 347-515 |
| Cow position: | chr29:42630234-42630073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 348-516 |
| Cow position: | chr29:19428774-19428610 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 349-516 |
| Cow position: | chr29:43544490-43544651 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 147, 49 |
| Conread position: | 351-501 |
| Cow position: | chr29:27819329-27819185 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 351-516 |
| Cow position: | chr29:6015237-6015073 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 359-502 |
| Cow position: | chr29:17154881-17154742 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 360-505 |
| Cow position: | chr29:8686432-8686290 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 136, 39 |
Show alignments to all cow chromosomes.