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Cow genome map

           
Conread name:
           
Ss1.1-rspc008_d12.5
        

               
Conread position:
               
211-499
               

               
Cow position:
               
chr4:17217890-17218161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr4:38949314-38949547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr4:19584927-19584662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
225-497
               

               
Cow position:
               
chr4:45909752-45910011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
226-506
               

               
Cow position:
               
chr4:38349984-38350243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr4:46656341-46656138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
228-490
               

               
Cow position:
               
chr4:61346242-61345992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
229-437
               

               
Cow position:
               
chr4:48321298-48321501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
229-445
               

               
Cow position:
               
chr4:65806115-65805908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
229-448
               

               
Cow position:
               
chr4:11512480-11512699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr4:5904714-5904499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr4:14761207-14760980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
229-473
               

               
Cow position:
               
chr4:39010257-39010031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
224, 19
               

               
Conread position:
               
229-490
               

               
Cow position:
               
chr4:19539028-19539264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
229-495
               

               
Cow position:
               
chr4:8947627-8947364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 173
               

               
Conread position:
               
229-500
               

               
Cow position:
               
chr4:10851214-10851486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
229-500
               

               
Cow position:
               
chr4:48902408-48902663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
267, 19
               

               
Conread position:
               
229-506
               

               
Cow position:
               
chr4:35834269-35834528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
264, 17
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr4:54191307-54191033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
267, 66
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr4:59871685-59871426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
230-413
               

               
Cow position:
               
chr4:29236729-29236897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
230-449
               

               
Cow position:
               
chr4:23808162-23807958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
230-498
               

               
Cow position:
               
chr4:19199079-19199322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
232-436
               

               
Cow position:
               
chr4:5132549-5132355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
233-418
               

               
Cow position:
               
chr4:26684584-26684401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
233-451
               

               
Cow position:
               
chr4:25802895-25802697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr4:44613207-44612950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
233-516
               

               
Cow position:
               
chr4:16762518-16762784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
234-397
               

               
Cow position:
               
chr4:13393849-13393692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
234-438
               

               
Cow position:
               
chr4:19542350-19542152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr4:23809602-23809809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
150, 88
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr4:5046934-5047156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
234-490
               

               
Cow position:
               
chr4:54854564-54854832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr4:3397195-3396944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr4:19304573-19304317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
234-492
               

               
Cow position:
               
chr4:22101062-22101294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
234-504
               

               
Cow position:
               
chr4:19700307-19700056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
262, 88
               

               
Conread position:
               
234-511
               

               
Cow position:
               
chr4:58173115-58172844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 79
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:10905251-10905520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:10915632-10915898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:12442110-12441840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:12901336-12901612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:13146151-13145862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:19500887-19501144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:37675827-37675560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
259, 40
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:43865633-43865911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr4:54524130-54524397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
260, 75
               

               
Conread position:
               
235-381
               

               
Cow position:
               
chr4:47029897-47029759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
235-439
               

               
Cow position:
               
chr4:20315296-20315493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
235-458
               

               
Cow position:
               
chr4:21532860-21533096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
235-473
               

               
Cow position:
               
chr4:53169374-53169612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 112
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr4:13973748-13974025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr4:18756634-18756376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
257, 10
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr4:20147385-20147130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
236-437
               

               
Cow position:
               
chr4:14778501-14778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
236-442
               

               
Cow position:
               
chr4:51630997-51630798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
236-445
               

               
Cow position:
               
chr4:46435532-46435337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chr4:54937294-54937048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
236-506
               

               
Cow position:
               
chr4:65753040-65753295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
193, 44
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr4:67393292-67393045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
258, 18
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr4:13241838-13241570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr4:13608662-13608406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
203, 77
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr4:45012955-45013219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
112, 140
               

               
Conread position:
               
236-516
               

               
Cow position:
               
chr4:45636370-45636111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
257, 36
               

               
Conread position:
               
237-409
               

               
Cow position:
               
chr4:59337506-59337327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 169
               

               
Conread position:
               
237-462
               

               
Cow position:
               
chr4:16814588-16814377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
214, 60
               

               
Conread position:
               
237-483
               

               
Cow position:
               
chr4:63117428-63117665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
237-486
               

               
Cow position:
               
chr4:63596569-63596344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
215, 78
               

               
Conread position:
               
237-498
               

               
Cow position:
               
chr4:65131224-65131488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:32259642-32259899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
238-449
               

               
Cow position:
               
chr4:21875031-21874811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 170
               

               
Conread position:
               
238-498
               

               
Cow position:
               
chr4:61351790-61351513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
238-501
               

               
Cow position:
               
chr4:65265093-65265340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr4:36577415-36577681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:45589399-45589655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
236, 39
               

               
Conread position:
               
238-516
               

               
Cow position:
               
chr4:10999515-10999762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
238-516
               

               
Cow position:
               
chr4:66547567-66547824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
258, 63
               

               
Conread position:
               
239-396
               

               
Cow position:
               
chr4:23880475-23880628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
239-445
               

               
Cow position:
               
chr4:46761805-46761620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr4:1236661-1236864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr4:46275648-46275436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr4:58389040-58389233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr4:21801230-21801021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr4:15462032-15462297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 160
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr4:13221985-13222238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr4:19102681-19102940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
257, 78
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr4:26012607-26012341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
254, 83
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr4:26830913-26830647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
254, 83
               

               
Conread position:
               
240-425
               

               
Cow position:
               
chr4:46125733-46125911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
240-435
               

               
Cow position:
               
chr4:69398638-69398843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
240-453
               

               
Cow position:
               
chr4:53380914-53380691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr4:7704122-7704381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
253, 61
               

               
Conread position:
               
241-497
               

               
Cow position:
               
chr4:18095469-18095701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
241-502
               

               
Cow position:
               
chr4:7043625-7043865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
241-504
               

               
Cow position:
               
chr4:46033750-46033492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
241-516
               

               
Cow position:
               
chr4:45367960-45367681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
241-516
               

               
Cow position:
               
chr4:69406565-69406295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr4:27699232-27698991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
242, 72
               

               
Conread position:
               
244-491
               

               
Cow position:
               
chr4:11496435-11496674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
244-516
               

               
Cow position:
               
chr4:23444848-23445104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
249, 74
               

               
Conread position:
               
246-449
               

               
Cow position:
               
chr4:27691435-27691237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
246-464
               

               
Cow position:
               
chr4:57421265-57421044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
246-516
               

               
Cow position:
               
chr4:64040317-64040066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
247-421
               

               
Cow position:
               
chr4:501483-501646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr4:45250160-45249918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr4:46487627-46487898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
248-435
               

               
Cow position:
               
chr4:57156695-57156878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
248-511
               

               
Cow position:
               
chr4:34631093-34630849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
246, 69
               

               
Conread position:
               
249-500
               

               
Cow position:
               
chr4:48381575-48381344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
249-506
               

               
Cow position:
               
chr4:58715701-58715962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
254-514
               

               
Cow position:
               
chr4:46501561-46501297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr4:61313019-61313264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
255-449
               

               
Cow position:
               
chr4:30845564-30845380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
255-505
               

               
Cow position:
               
chr4:63349296-63349527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
255-515
               

               
Cow position:
               
chr4:45775151-45775393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
238, 56
               

               
Conread position:
               
256-435
               

               
Cow position:
               
chr4:51477396-51477575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
257-422
               

               
Cow position:
               
chr4:63963401-63963240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr4:9825510-9825779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr4:45738291-45738534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
223, 19
               

               
Conread position:
               
259-492
               

               
Cow position:
               
chr4:39458834-39458612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
189, 40
               

               
Conread position:
               
274-516
               

               
Cow position:
               
chr4:16736696-16736447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
277-437
               

               
Cow position:
               
chr4:16644958-16645112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr4:54543485-54543670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
280-445
               

               
Cow position:
               
chr4:33870251-33870087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
281-491
               

               
Cow position:
               
chr4:10958909-10958709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
290-516
               

               
Cow position:
               
chr4:48173299-48173082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
206, 15
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr4:45626475-45626677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr4:22546688-22546893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
303-437
               

               
Cow position:
               
chr4:43579261-43579392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
303-445
               

               
Cow position:
               
chr4:479641-479779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-449
               

               
Cow position:
               
chr4:30691154-30691013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
303-467
               

               
Cow position:
               
chr4:23943491-23943656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
303-490
               

               
Cow position:
               
chr4:46560331-46560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
303-491
               

               
Cow position:
               
chr4:656657-656839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:50687713-50687897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr4:20124816-20125006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr4:48322189-48321995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
303-507
               

               
Cow position:
               
chr4:12127487-12127682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
303-509
               

               
Cow position:
               
chr4:35638753-35638948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
303-514
               

               
Cow position:
               
chr4:46494457-46494243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr4:62317601-62317389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr4:18974578-18974369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr4:41370789-41370996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr4:52823250-52823464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
303-516
               

               
Cow position:
               
chr4:61188714-61188925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
308-516
               

               
Cow position:
               
chr4:41185770-41185965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
308-516
               

               
Cow position:
               
chr4:51784328-51784123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
193, 90
               

               
Conread position:
               
308-516
               

               
Cow position:
               
chr4:65950804-65950600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
309-449
               

               
Cow position:
               
chr4:58880813-58880952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
309-490
               

               
Cow position:
               
chr4:50676027-50676197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
309-514
               

               
Cow position:
               
chr4:11380430-11380231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr4:2020-1815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr4:19098621-19098410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
309-516
               

               
Cow position:
               
chr4:30792112-30791916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
183, 11
               

               
Conread position:
               
311-479
               

               
Cow position:
               
chr4:61969579-61969745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr4:10732366-10732168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
312-445
               

               
Cow position:
               
chr4:26469800-26469665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
312-448
               

               
Cow position:
               
chr4:32272828-32272963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
313-435
               

               
Cow position:
               
chr4:12909490-12909610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
313-501
               

               
Cow position:
               
chr4:22138078-22138259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
314-450
               

               
Cow position:
               
chr4:7729293-7729429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr4:23509736-23509550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
314-513
               

               
Cow position:
               
chr4:47038912-47038714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
314-516
               

               
Cow position:
               
chr4:31004269-31004462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
314-516
               

               
Cow position:
               
chr4:32693931-32693729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
315-489
               

               
Cow position:
               
chr4:46702517-46702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
315-502
               

               
Cow position:
               
chr4:23450956-23451134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr4:25879531-25879343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
316-516
               

               
Cow position:
               
chr4:26401096-26400907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
318-449
               

               
Cow position:
               
chr4:42044839-42044966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
318-509
               

               
Cow position:
               
chr4:51920684-51920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr4:3850689-3850497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
320-449
               

               
Cow position:
               
chr4:51708207-51708074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
320-513
               

               
Cow position:
               
chr4:59785457-59785266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr4:508771-508963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr4:4320856-4321055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr4:38946356-38946153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr4:45074196-45074008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
321-492
               

               
Cow position:
               
chr4:60719235-60719072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
322-516
               

               
Cow position:
               
chr4:32726359-32726171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
323-509
               

               
Cow position:
               
chr4:54541505-54541684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
325-499
               

               
Cow position:
               
chr4:2602361-2602199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr4:44782507-44782337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
325-514
               

               
Cow position:
               
chr4:20142779-20142961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr4:36893491-36893302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr4:19321945-19322135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
326-495
               

               
Cow position:
               
chr4:45874333-45874498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
326-516
               

               
Cow position:
               
chr4:59378039-59377854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
327-499
               

               
Cow position:
               
chr4:33181673-33181508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr4:12004343-12004175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr4:24371731-24371913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr4:27632568-27632395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr4:34383213-34383398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr4:45582992-45583174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr4:45662382-45662564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr4:12135797-12135965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
328-516
               

               
Cow position:
               
chr4:13941584-13941407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
328-516
               

               
Cow position:
               
chr4:16594210-16594025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 28
               

               
Conread position:
               
328-516
               

               
Cow position:
               
chr4:65650005-65650184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr4:4084984-4085174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr4:19709068-19708875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr4:47510511-47510335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 19
               

               
Conread position:
               
331-467
               

               
Cow position:
               
chr4:14058796-14058665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
331-496
               

               
Cow position:
               
chr4:58248526-58248372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
331-514
               

               
Cow position:
               
chr4:44772916-44773097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
331-514
               

               
Cow position:
               
chr4:46476821-46477006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr4:12591089-12591269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr4:46455942-46456115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
331-516
               

               
Cow position:
               
chr4:48104441-48104622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
332-504
               

               
Cow position:
               
chr4:45685583-45685415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
332-514
               

               
Cow position:
               
chr4:45706164-45705992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 66
               

               
Conread position:
               
332-516
               

               
Cow position:
               
chr4:10056330-10056156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
333-499
               

               
Cow position:
               
chr4:42231899-42232059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
333-502
               

               
Cow position:
               
chr4:36731315-36731151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
333-503
               

               
Cow position:
               
chr4:29384112-29384273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
334-463
               

               
Cow position:
               
chr4:56410469-56410339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
334-476
               

               
Cow position:
               
chr4:8083676-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
334-486
               

               
Cow position:
               
chr4:61608843-61608988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
334-489
               

               
Cow position:
               
chr4:19456565-19456713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
334-492
               

               
Cow position:
               
chr4:19256815-19256666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
334-492
               

               
Cow position:
               
chr4:40414504-40414657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
334-495
               

               
Cow position:
               
chr4:14500120-14500276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:16881238-16881418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:37502935-37502766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:46591790-46591610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:49794782-49794612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:52779976-52779797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:54171749-54171573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr4:54920968-54921143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
335-462
               

               
Cow position:
               
chr4:61268311-61268186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
335-501
               

               
Cow position:
               
chr4:56239736-56239899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
335-516
               

               
Cow position:
               
chr4:36290747-36290573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
336-516
               

               
Cow position:
               
chr4:46136871-46136696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
337-514
               

               
Cow position:
               
chr4:5963870-5964041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
338-509
               

               
Cow position:
               
chr4:39128655-39128496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
338-516
               

               
Cow position:
               
chr4:53126230-53126061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
339-451
               

               
Cow position:
               
chr4:44681133-44681245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
339-460
               

               
Cow position:
               
chr4:22482442-22482319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
339-516
               

               
Cow position:
               
chr4:25888718-25888885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 9
               

               
Conread position:
               
340-445
               

               
Cow position:
               
chr4:56805292-56805189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
341-516
               

               
Cow position:
               
chr4:4084333-4084505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
341-516
               

               
Cow position:
               
chr4:65175030-65175198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr4:961539-961710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr4:45595919-45596085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr4:1495299-1495455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr4:12561151-12560973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr4:37935174-37935339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr4:45563856-45563687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
348-516
               

               
Cow position:
               
chr4:3837384-3837217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr4:69543290-69543144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
351-478
               

               
Cow position:
               
chr4:13140991-13141117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
351-514
               

               
Cow position:
               
chr4:34369344-34369505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr4:56570912-56570752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
352-500
               

               
Cow position:
               
chr4:5460757-5460898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
352-516
               

               
Cow position:
               
chr4:21017-20863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.