Cow genome map

Conread name: Ss1.1-rspc008_d12.5

Conread position: 206-397
Cow position: chr6:29291849-29291662 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 32

Conread position: 215-444
Cow position: chr6:68344003-68343769 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 24

Conread position: 222-449
Cow position: chr6:35702068-35702289 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 222-483
Cow position: chr6:36643230-36643465 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 222-516
Cow position: chr6:17997056-17997324 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 66

Conread position: 226-397
Cow position: chr6:56664152-56663993 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 226-501
Cow position: chr6:6097992-6098251 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 102

Conread position: 227-381
Cow position: chr6:18615301-18615464 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 228-488
Cow position: chr6:21066594-21066862 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 83, 40

Conread position: 228-488
Cow position: chr6:61128670-61128935 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 158

Conread position: 228-499
Cow position: chr6:8731674-8731420 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 49

Conread position: 229-366
Cow position: chr6:61544130-61544267 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 115

Conread position: 229-394
Cow position: chr6:56950471-56950310 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 89

Conread position: 229-422
Cow position: chr6:54840248-54840425 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 160, 25

Conread position: 229-448
Cow position: chr6:38234510-38234289 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 78, 25

Conread position: 229-449
Cow position: chr6:13040704-13040496 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 229-450
Cow position: chr6:5673650-5673437 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 103

Conread position: 229-498
Cow position: chr6:7130610-7130876 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 240, 16

Conread position: 229-499
Cow position: chr6:21004930-21004685 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 229-501
Cow position: chr6:14063036-14063300 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 25

Conread position: 229-513
Cow position: chr6:23353807-23353549 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 17

Conread position: 229-514
Cow position: chr6:37783679-37783395 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 123

Conread position: 229-515
Cow position: chr6:27658495-27658214 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 18

Conread position: 229-516
Cow position: chr6:9750782-9751062 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 96

Conread position: 229-516
Cow position: chr6:32809570-32809268 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 133

Conread position: 229-516
Cow position: chr6:48469256-48468991 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 267, 21

Conread position: 229-516
Cow position: chr6:60740286-60740008 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 123, 58

Conread position: 230-334
Cow position: chr6:37603915-37603812 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 230-500
Cow position: chr6:37395136-37395393 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 28

Conread position: 230-512
Cow position: chr6:53841251-53841507 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 230-516
Cow position: chr6:35993858-35993576 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 231-516
Cow position: chr6:67456988-67456714 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 154, 14

Conread position: 233-442
Cow position: chr6:34499008-34498801 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 193, 110

Conread position: 233-445
Cow position: chr6:46282744-46282944 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 155, 12

Conread position: 233-449
Cow position: chr6:49607660-49607448 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 10, 78

Conread position: 234-429
Cow position: chr6:17194475-17194287 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 85

Conread position: 234-430
Cow position: chr6:38020926-38020748 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 40

Conread position: 234-435
Cow position: chr6:10224463-10224261 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 120

Conread position: 234-435
Cow position: chr6:50882851-50882650 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 40

Conread position: 234-449
Cow position: chr6:18903790-18903996 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 234-451
Cow position: chr6:34569664-34569461 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 234-490
Cow position: chr6:57550442-57550182 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 117

Conread position: 234-500
Cow position: chr6:9736397-9736646 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 234-501
Cow position: chr6:35103038-35103319 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 182

Conread position: 234-501
Cow position: chr6:35171860-35171613 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 11

Conread position: 234-504
Cow position: chr6:22215213-22215471 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 82

Conread position: 234-515
Cow position: chr6:15937604-15937859 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 234-516
Cow position: chr6:2585206-2584933 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 25

Conread position: 234-516
Cow position: chr6:15446945-15447211 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 260, 77

Conread position: 234-516
Cow position: chr6:21535288-21535030 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 276, 56

Conread position: 235-449
Cow position: chr6:24514286-24514490 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 87

Conread position: 235-506
Cow position: chr6:6201678-6201428 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 9

Conread position: 235-516
Cow position: chr6:37199269-37199538 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 39

Conread position: 236-449
Cow position: chr6:29852809-29853009 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 236-516
Cow position: chr6:38441425-38441168 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 261, 12

Conread position: 237-409
Cow position: chr6:35628311-35628141 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 8

Conread position: 237-481
Cow position: chr6:40879034-40878806 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 187, 9

Conread position: 237-516
Cow position: chr6:15243083-15242824 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 256, 8

Conread position: 237-516
Cow position: chr6:59719056-59718788 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 247, 76

Conread position: 238-341
Cow position: chr6:56850261-56850158 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 238-448
Cow position: chr6:36939118-36938924 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 238-459
Cow position: chr6:3447994-3447778 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 238-499
Cow position: chr6:51969350-51969088 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 18

Conread position: 239-444
Cow position: chr6:53811829-53811643 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 239-457
Cow position: chr6:20008709-20008504 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 239-516
Cow position: chr6:19446496-19446245 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 176, 48

Conread position: 239-516
Cow position: chr6:60057395-60057662 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 257, 108

Conread position: 240-372
Cow position: chr6:60457523-60457387 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 240-414
Cow position: chr6:13326911-13327084 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 69, 106

Conread position: 240-445
Cow position: chr6:60265926-60266123 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 240-506
Cow position: chr6:47356067-47355829 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 240-515
Cow position: chr6:35896087-35896349 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 85, 14

Conread position: 240-516
Cow position: chr6:30974319-30974039 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 82, 171

Conread position: 240-516
Cow position: chr6:47339084-47339366 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 82, 10

Conread position: 240-516
Cow position: chr6:54141063-54140788 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 103, 81

Conread position: 241-449
Cow position: chr6:48678863-48678663 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 13

Conread position: 241-509
Cow position: chr6:67215011-67214750 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 13

Conread position: 241-516
Cow position: chr6:18144442-18144183 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 217, 29

Conread position: 242-436
Cow position: chr6:8209334-8209536 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 163

Conread position: 242-515
Cow position: chr6:44970545-44970268 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 57

Conread position: 244-516
Cow position: chr6:5302163-5302424 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 5, 109

Conread position: 246-516
Cow position: chr6:24781315-24781562 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 247, 72

Conread position: 246-516
Cow position: chr6:66131555-66131299 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 250, 87

Conread position: 247-448
Cow position: chr6:57300005-57299815 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 72

Conread position: 247-461
Cow position: chr6:46997529-46997749 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 27

Conread position: 247-498
Cow position: chr6:21514351-21514597 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 34

Conread position: 249-390
Cow position: chr6:63409063-63409208 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 25

Conread position: 251-516
Cow position: chr6:38207255-38207500 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 243, 30

Conread position: 253-500
Cow position: chr6:57079655-57079432 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 243, 33

Conread position: 254-516
Cow position: chr6:4691736-4691987 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 7, 62

Conread position: 254-516
Cow position: chr6:67951185-67950944 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 239, 18

Conread position: 255-449
Cow position: chr6:42136884-42137061 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 255-501
Cow position: chr6:49096201-49096442 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 148

Conread position: 255-516
Cow position: chr6:60517065-60516818 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 249, 84

Conread position: 256-516
Cow position: chr6:51675161-51674904 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 78, 122

Conread position: 257-516
Cow position: chr6:12091761-12092001 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 236, 49

Conread position: 258-449
Cow position: chr6:60186430-60186607 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 259-434
Cow position: chr6:36516208-36516031 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 142

Conread position: 266-463
Cow position: chr6:19507947-19508147 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 138

Conread position: 280-445
Cow position: chr6:67305290-67305129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 53

Conread position: 280-494
Cow position: chr6:40774110-40774316 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 37

Conread position: 281-482
Cow position: chr6:139416-139617 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 124

Conread position: 284-458
Cow position: chr6:47676238-47676060 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 120

Conread position: 292-436
Cow position: chr6:28900540-28900395 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 108

Conread position: 301-515
Cow position: chr6:51086267-51086063 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 24

Conread position: 302-501
Cow position: chr6:46331123-46330934 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 59

Conread position: 303-491
Cow position: chr6:50771160-50771340 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 97

Conread position: 303-492
Cow position: chr6:54127621-54127795 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 303-501
Cow position: chr6:21475927-21475736 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 46

Conread position: 303-502
Cow position: chr6:67282091-67281902 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 193, 13

Conread position: 303-511
Cow position: chr6:19292998-19292801 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 24

Conread position: 303-514
Cow position: chr6:1703997-1703798 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 90

Conread position: 303-515
Cow position: chr6:39093945-39093740 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 13

Conread position: 303-516
Cow position: chr6:1103540-1103745 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 13

Conread position: 303-516
Cow position: chr6:37149386-37149180 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 198, 11

Conread position: 303-516
Cow position: chr6:67187881-67187674 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 191, 13

Conread position: 304-516
Cow position: chr6:19996814-19996609 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 12

Conread position: 308-516
Cow position: chr6:21590902-21590697 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 186, 26

Conread position: 309-445
Cow position: chr6:34512898-34512764 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 309-492
Cow position: chr6:60777966-60777779 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 88

Conread position: 309-515
Cow position: chr6:60451622-60451424 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 97, 90

Conread position: 309-516
Cow position: chr6:582074-582280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 93

Conread position: 309-516
Cow position: chr6:6343625-6343420 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 48

Conread position: 309-516
Cow position: chr6:55535556-55535757 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 87

Conread position: 311-461
Cow position: chr6:37603759-37603607 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 12

Conread position: 312-516
Cow position: chr6:16764453-16764663 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 74

Conread position: 312-516
Cow position: chr6:19131623-19131421 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 88

Conread position: 314-460
Cow position: chr6:107237-107381 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 37

Conread position: 314-512
Cow position: chr6:1002072-1002267 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 86

Conread position: 314-516
Cow position: chr6:47799484-47799284 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 86

Conread position: 318-516
Cow position: chr6:36284428-36284234 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 61

Conread position: 320-505
Cow position: chr6:9008429-9008606 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 320-516
Cow position: chr6:44867358-44867548 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 66

Conread position: 322-511
Cow position: chr6:21235226-21235039 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 76

Conread position: 323-501
Cow position: chr6:58597324-58597495 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 76

Conread position: 323-516
Cow position: chr6:18048837-18049032 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 5, 82

Conread position: 324-494
Cow position: chr6:54864481-54864639 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 23

Conread position: 325-516
Cow position: chr6:17794586-17794769 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 168, 23

Conread position: 325-516
Cow position: chr6:56986471-56986653 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 65

Conread position: 326-492
Cow position: chr6:7568302-7568141 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 32

Conread position: 326-509
Cow position: chr6:2899387-2899569 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 11

Conread position: 327-501
Cow position: chr6:51530012-51530181 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 327-502
Cow position: chr6:14914060-14914228 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 171, 18

Conread position: 327-512
Cow position: chr6:50984398-50984220 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 47

Conread position: 327-513
Cow position: chr6:59631746-59631929 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 23

Conread position: 327-516
Cow position: chr6:2153423-2153606 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 21

Conread position: 327-516
Cow position: chr6:5095366-5095555 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 124, 21

Conread position: 327-516
Cow position: chr6:6060397-6060577 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 167, 20

Conread position: 327-516
Cow position: chr6:19695982-19695802 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 18

Conread position: 327-516
Cow position: chr6:32453560-32453378 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 328-503
Cow position: chr6:3634575-3634393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 71

Conread position: 331-449
Cow position: chr6:35654378-35654494 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 331-462
Cow position: chr6:53711574-53711444 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 120, 26

Conread position: 331-478
Cow position: chr6:58076567-58076418 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 68

Conread position: 331-478
Cow position: chr6:62478696-62478845 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 55

Conread position: 331-497
Cow position: chr6:47841724-47841553 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 67

Conread position: 331-506
Cow position: chr6:10105807-10105976 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 165, 17

Conread position: 331-516
Cow position: chr6:7801224-7801402 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 162, 67

Conread position: 331-516
Cow position: chr6:10176128-10176304 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 69

Conread position: 331-516
Cow position: chr6:57089375-57089188 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 163, 20

Conread position: 332-462
Cow position: chr6:19519546-19519417 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 36

Conread position: 332-498
Cow position: chr6:41937098-41937261 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 51

Conread position: 332-516
Cow position: chr6:53932677-53932855 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 332-516
Cow position: chr6:59301619-59301796 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 333-516
Cow position: chr6:2623944-2623774 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 168, 65

Conread position: 334-498
Cow position: chr6:37692920-37692763 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 334-498
Cow position: chr6:54867686-54867529 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 334-505
Cow position: chr6:59069451-59069619 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 14

Conread position: 334-513
Cow position: chr6:13367454-13367278 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 14

Conread position: 334-514
Cow position: chr6:57287494-57287668 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 14

Conread position: 334-516
Cow position: chr6:143206-143380 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 334-516
Cow position: chr6:6067532-6067703 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 14

Conread position: 334-516
Cow position: chr6:40032359-40032181 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 159, 14

Conread position: 334-516
Cow position: chr6:43134770-43134946 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 16

Conread position: 334-516
Cow position: chr6:61142392-61142572 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 14

Conread position: 335-513
Cow position: chr6:65903455-65903627 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 50

Conread position: 335-516
Cow position: chr6:64432108-64431927 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 64

Conread position: 337-433
Cow position: chr6:48278721-48278817 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 62

Conread position: 337-516
Cow position: chr6:63298864-63299040 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 61

Conread position: 338-492
Cow position: chr6:44194383-44194531 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 49

Conread position: 338-506
Cow position: chr6:61575986-61575830 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 61

Conread position: 338-516
Cow position: chr6:23401827-23401998 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 338-516
Cow position: chr6:35990067-35990243 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 61

Conread position: 339-449
Cow position: chr6:16352190-16352298 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 339-502
Cow position: chr6:1475510-1475352 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 154, 59

Conread position: 339-506
Cow position: chr6:38771444-38771287 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 155, 9

Conread position: 339-509
Cow position: chr6:53090172-53090011 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 339-510
Cow position: chr6:47575072-47574903 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 60

Conread position: 339-514
Cow position: chr6:60118313-60118143 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 44

Conread position: 340-502
Cow position: chr6:67805852-67806008 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 156, 8

Conread position: 341-516
Cow position: chr6:15300673-15300834 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 343-516
Cow position: chr6:42565848-42565681 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 149, 29

Conread position: 343-516
Cow position: chr6:60667571-60667412 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 346-512
Cow position: chr6:37463181-37463021 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 55

Conread position: 347-501
Cow position: chr6:54573417-54573268 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 52

Conread position: 347-516
Cow position: chr6:20196146-20196305 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 149, 53

Conread position: 347-516
Cow position: chr6:34195992-34196158 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 92

Conread position: 348-492
Cow position: chr6:63047748-63047610 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 348-516
Cow position: chr6:19681369-19681536 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 146, 50

Conread position: 349-510
Cow position: chr6:38218821-38218666 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 50

Conread position: 354-516
Cow position: chr6:8787887-8788047 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 45

Conread position: 355-501
Cow position: chr6:12338148-12338002 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 96

Conread position: 360-516
Cow position: chr6:4864403-4864556 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 133, 39

Show alignments to all cow chromosomes.