Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rspc008_f14.5
        

               Conread position:
               70-266
               

               Cow position:
               chr1:73397817-73398017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               72-309
               

               Cow position:
               chr1:1347379-1347621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               75-263
               

               Cow position:
               chr1:47190741-47190935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               83-321
               

               Cow position:
               chr1:82336913-82336680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               85-335
               

               Cow position:
               chr1:484227-484480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 10
               

               Conread position:
               85-348
               

               Cow position:
               chr1:15334129-15333868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               86-347
               

               Cow position:
               chr1:96599063-96599313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               87-333
               

               Cow position:
               chr1:196762-197015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               87-334
               

               Cow position:
               chr1:52467524-52467293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               87-347
               

               Cow position:
               chr1:49753723-49753457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               88-301
               

               Cow position:
               chr1:20537442-20537227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               88-310
               

               Cow position:
               chr1:76518662-76518435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               89-322
               

               Cow position:
               chr1:100324521-100324748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               89-347
               

               Cow position:
               chr1:60281588-60281349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               90-336
               

               Cow position:
               chr1:46245499-46245762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               90-345
               

               Cow position:
               chr1:98468039-98467782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               91-322
               

               Cow position:
               chr1:93499852-93499621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               91-323
               

               Cow position:
               chr1:87220679-87220460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               92-335
               

               Cow position:
               chr1:51968763-51968525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               95-330
               

               Cow position:
               chr1:87198059-87197813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               97-277
               

               Cow position:
               chr1:63212031-63212213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               97-330
               

               Cow position:
               chr1:150694-150932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               99-192
               

               Cow position:
               chr1:97409614-97409521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-338
               

               Cow position:
               chr1:14567414-14567650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               101-306
               

               Cow position:
               chr1:65030296-65030084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               101-306
               

               Cow position:
               chr1:81638766-81638565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               101-336
               

               Cow position:
               chr1:874889-874641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               101-345
               

               Cow position:
               chr1:22730961-22730712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               101-348
               

               Cow position:
               chr1:101507578-101507335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               102-305
               

               Cow position:
               chr1:41022640-41022438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               102-306
               

               Cow position:
               chr1:95704029-95703822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 26
               

               Conread position:
               102-329
               

               Cow position:
               chr1:46693425-46693660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               92, 130
               

               Conread position:
               102-331
               

               Cow position:
               chr1:102730532-102730771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               103-336
               

               Cow position:
               chr1:74081777-74081994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               103-347
               

               Cow position:
               chr1:86340234-86340488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               104-347
               

               Cow position:
               chr1:84137-83908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               104-348
               

               Cow position:
               chr1:26895589-26895836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               90, 29
               

               Conread position:
               104-348
               

               Cow position:
               chr1:53370305-53370060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               108-297
               

               Cow position:
               chr1:7966064-7965872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               108-346
               

               Cow position:
               chr1:63530779-63530535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               109-262
               

               Cow position:
               chr1:98742235-98742078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               109-263
               

               Cow position:
               chr1:74304861-74305022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               109-265
               

               Cow position:
               chr1:59551658-59551495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               109-316
               

               Cow position:
               chr1:40303766-40303558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               109-319
               

               Cow position:
               chr1:95049646-95049860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               109-320
               

               Cow position:
               chr1:84595109-84594891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               109-329
               

               Cow position:
               chr1:5596996-5597214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               109-329
               

               Cow position:
               chr1:41697274-41697052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 179
               

               Conread position:
               109-338
               

               Cow position:
               chr1:7793318-7793537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               225, 7
               

               Conread position:
               109-345
               

               Cow position:
               chr1:22526093-22525856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               109-345
               

               Cow position:
               chr1:84905842-84906085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               109-346
               

               Cow position:
               chr1:38419245-38419004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               109-347
               

               Cow position:
               chr1:527862-528095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               109-347
               

               Cow position:
               chr1:30035443-30035192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               109-347
               

               Cow position:
               chr1:99322353-99322586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               109-348
               

               Cow position:
               chr1:78092258-78092012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               109-348
               

               Cow position:
               chr1:99609586-99609347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               99, 174
               

               Conread position:
               110-249
               

               Cow position:
               chr1:34952456-34952317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 84
               

               Conread position:
               110-277
               

               Cow position:
               chr1:42797093-42796923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               110-301
               

               Cow position:
               chr1:32217455-32217264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-301
               

               Cow position:
               chr1:54569918-54569720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-321
               

               Cow position:
               chr1:76739697-76739908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               110-329
               

               Cow position:
               chr1:29329765-29329535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               110-330
               

               Cow position:
               chr1:25383887-25383662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 212
               

               Conread position:
               110-333
               

               Cow position:
               chr1:24542355-24542579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               110-336
               

               Cow position:
               chr1:31819320-31819098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 18
               

               Conread position:
               110-342
               

               Cow position:
               chr1:10941881-10942113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-342
               

               Cow position:
               chr1:10964505-10964273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-345
               

               Cow position:
               chr1:52496985-52496750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               110-346
               

               Cow position:
               chr1:50930763-50930997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               110-346
               

               Cow position:
               chr1:68826706-68826926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               110-347
               

               Cow position:
               chr1:38277809-38278052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-347
               

               Cow position:
               chr1:87072911-87072675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               110-348
               

               Cow position:
               chr1:6166450-6166222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               110-348
               

               Cow position:
               chr1:6854101-6854329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               110-348
               

               Cow position:
               chr1:43352434-43352679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 190
               

               Conread position:
               111-267
               

               Cow position:
               chr1:83222204-83222040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               111-301
               

               Cow position:
               chr1:53403001-53402803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               111-315
               

               Cow position:
               chr1:35671754-35671550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 170
               

               Conread position:
               111-323
               

               Cow position:
               chr1:4294560-4294344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               111-328
               

               Cow position:
               chr1:9637246-9637024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               111-330
               

               Cow position:
               chr1:27792841-27793053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               111-331
               

               Cow position:
               chr1:101280520-101280742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               111-336
               

               Cow position:
               chr1:83606239-83606463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               111-343
               

               Cow position:
               chr1:49334176-49334412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               111-346
               

               Cow position:
               chr1:54217214-54216994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               111-347
               

               Cow position:
               chr1:11771867-11772109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               111-347
               

               Cow position:
               chr1:30862197-30862433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               111-347
               

               Cow position:
               chr1:75411620-75411863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               111-347
               

               Cow position:
               chr1:91755499-91755256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               111-348
               

               Cow position:
               chr1:24132846-24133084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               88, 172
               

               Conread position:
               111-348
               

               Cow position:
               chr1:36080043-36079799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               111-348
               

               Cow position:
               chr1:39426801-39427030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               112-259
               

               Cow position:
               chr1:43378053-43377915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               112-290
               

               Cow position:
               chr1:56749029-56748845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               112-296
               

               Cow position:
               chr1:94712948-94713138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               112-301
               

               Cow position:
               chr1:1380216-1380019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               112-309
               

               Cow position:
               chr1:79178846-79178644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               112-310
               

               Cow position:
               chr1:73534426-73534628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               112-320
               

               Cow position:
               chr1:89437513-89437711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               112-334
               

               Cow position:
               chr1:72068619-72068846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               112-334
               

               Cow position:
               chr1:96019443-96019219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               112-336
               

               Cow position:
               chr1:72422191-72422421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               112-339
               

               Cow position:
               chr1:72105615-72105396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 16
               

               Conread position:
               112-346
               

               Cow position:
               chr1:66898280-66898521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               112-346
               

               Cow position:
               chr1:81228121-81228357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               112-346
               

               Cow position:
               chr1:84103843-84104084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               112-347
               

               Cow position:
               chr1:18936622-18936857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               112-347
               

               Cow position:
               chr1:22824124-22823881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               112-347
               

               Cow position:
               chr1:55428738-55428981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               112-347
               

               Cow position:
               chr1:81290719-81290483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               112-348
               

               Cow position:
               chr1:101866284-101866521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               113-270
               

               Cow position:
               chr1:65160345-65160181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               81, 134
               

               Conread position:
               113-297
               

               Cow position:
               chr1:73545693-73545885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               113-298
               

               Cow position:
               chr1:31801706-31801895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               113-310
               

               Cow position:
               chr1:98556903-98557106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               113-346
               

               Cow position:
               chr1:101835031-101834796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               113-347
               

               Cow position:
               chr1:20000541-20000772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               113-348
               

               Cow position:
               chr1:2075134-2075375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               114-266
               

               Cow position:
               chr1:69250646-69250491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 113
               

               Conread position:
               114-332
               

               Cow position:
               chr1:68855382-68855156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 199
               

               Conread position:
               114-333
               

               Cow position:
               chr1:33846357-33846579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               114-335
               

               Cow position:
               chr1:64572728-64572503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               114-346
               

               Cow position:
               chr1:48581340-48581107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               114-347
               

               Cow position:
               chr1:43286543-43286322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               115-288
               

               Cow position:
               chr1:46354228-46354404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               116-266
               

               Cow position:
               chr1:56719551-56719397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               116-311
               

               Cow position:
               chr1:94823179-94823380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               116-329
               

               Cow position:
               chr1:15902690-15902488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               116-333
               

               Cow position:
               chr1:65028732-65028524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               116-336
               

               Cow position:
               chr1:49433050-49433277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               116-348
               

               Cow position:
               chr1:102349549-102349771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               118-274
               

               Cow position:
               chr1:95017350-95017497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               118-278
               

               Cow position:
               chr1:771580-771735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               118-284
               

               Cow position:
               chr1:64516689-64516852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               118-285
               

               Cow position:
               chr1:10470630-10470464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               118-287
               

               Cow position:
               chr1:22628447-22628614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               118-290
               

               Cow position:
               chr1:33720314-33720134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               118-297
               

               Cow position:
               chr1:22231860-22231674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               118-310
               

               Cow position:
               chr1:15875869-15875673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               118-315
               

               Cow position:
               chr1:13828378-13828578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               118-316
               

               Cow position:
               chr1:71664685-71664891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               118-318
               

               Cow position:
               chr1:92188168-92187962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               118-319
               

               Cow position:
               chr1:4512180-4511987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               118-324
               

               Cow position:
               chr1:75745070-75744861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               118-328
               

               Cow position:
               chr1:73960896-73960698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               118-330
               

               Cow position:
               chr1:41137937-41138151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               118-330
               

               Cow position:
               chr1:102529643-102529864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               118-333
               

               Cow position:
               chr1:21954018-21954232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               118-333
               

               Cow position:
               chr1:95153083-95152861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               118-334
               

               Cow position:
               chr1:36998392-36998175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               89, 203
               

               Conread position:
               118-334
               

               Cow position:
               chr1:43505734-43505518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-334
               

               Cow position:
               chr1:73020452-73020673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               118-336
               

               Cow position:
               chr1:186071-186287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 148
               

               Conread position:
               118-336
               

               Cow position:
               chr1:14205954-14206162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               118-336
               

               Cow position:
               chr1:20871347-20871572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               118-336
               

               Cow position:
               chr1:48443981-48444207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               118-336
               

               Cow position:
               chr1:96964529-96964305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 181
               

               Conread position:
               118-338
               

               Cow position:
               chr1:31794799-31795020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               118-345
               

               Cow position:
               chr1:51446091-51445866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               118-345
               

               Cow position:
               chr1:52435485-52435250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               118-345
               

               Cow position:
               chr1:83072650-83072419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               118-346
               

               Cow position:
               chr1:92996677-92996914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               118-346
               

               Cow position:
               chr1:95177128-95176916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               118-347
               

               Cow position:
               chr1:4391059-4391303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               118-347
               

               Cow position:
               chr1:12870802-12871033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               118-347
               

               Cow position:
               chr1:17056199-17055970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 10
               

               Conread position:
               118-347
               

               Cow position:
               chr1:31934714-31934483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               118-347
               

               Cow position:
               chr1:72304192-72304411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               118-347
               

               Cow position:
               chr1:96304765-96304992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               118-348
               

               Cow position:
               chr1:47790458-47790687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               118-348
               

               Cow position:
               chr1:90975866-90976113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               119-266
               

               Cow position:
               chr1:90192628-90192473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               119-329
               

               Cow position:
               chr1:93590382-93590592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 9
               

               Conread position:
               119-346
               

               Cow position:
               chr1:7971612-7971389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               186, 9
               

               Conread position:
               119-347
               

               Cow position:
               chr1:74083978-74084212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               5, 180
               

               Conread position:
               119-348
               

               Cow position:
               chr1:100575832-100576056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               85, 161
               

               Conread position:
               120-272
               

               Cow position:
               chr1:50906473-50906628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               120-290
               

               Cow position:
               chr1:29971332-29971509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               120-290
               

               Cow position:
               chr1:50854120-50853943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               120-310
               

               Cow position:
               chr1:101883183-101883381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               120-328
               

               Cow position:
               chr1:43855498-43855296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               120-330
               

               Cow position:
               chr1:54267730-54267944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               120-330
               

               Cow position:
               chr1:56618448-56618657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 140
               

               Conread position:
               120-335
               

               Cow position:
               chr1:8287422-8287642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               120-336
               

               Cow position:
               chr1:7908233-7908024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               120-336
               

               Cow position:
               chr1:97144263-97144477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               120-348
               

               Cow position:
               chr1:43547862-43548073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               148, 8
               

               Conread position:
               121-247
               

               Cow position:
               chr1:8778130-8778259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               121-253
               

               Cow position:
               chr1:43340426-43340564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-258
               

               Cow position:
               chr1:2715225-2715087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               121-261
               

               Cow position:
               chr1:54294314-54294453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               121-265
               

               Cow position:
               chr1:20202507-20202361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               121-265
               

               Cow position:
               chr1:29935185-29935329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               121-266
               

               Cow position:
               chr1:30028025-30028175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               121-266
               

               Cow position:
               chr1:31274781-31274933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               121-266
               

               Cow position:
               chr1:37470698-37470557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-266
               

               Cow position:
               chr1:39095692-39095545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               121-271
               

               Cow position:
               chr1:36887124-36887275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               121-277
               

               Cow position:
               chr1:43379154-43379316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-282
               

               Cow position:
               chr1:44321389-44321557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               121-282
               

               Cow position:
               chr1:75227118-75227279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-283
               

               Cow position:
               chr1:40284442-40284599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               121-289
               

               Cow position:
               chr1:14980931-14981091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-292
               

               Cow position:
               chr1:23698822-23698655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               121-294
               

               Cow position:
               chr1:87934074-87934242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               121-295
               

               Cow position:
               chr1:3154822-3155006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               121-296
               

               Cow position:
               chr1:84787467-84787297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               121-297
               

               Cow position:
               chr1:628175-627992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               121-297
               

               Cow position:
               chr1:90820273-90820451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 144
               

               Conread position:
               121-298
               

               Cow position:
               chr1:63461085-63460903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-298
               

               Cow position:
               chr1:70044552-70044380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               121-301
               

               Cow position:
               chr1:1605924-1606112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 162
               

               Conread position:
               121-301
               

               Cow position:
               chr1:32035507-32035688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               121-301
               

               Cow position:
               chr1:48301244-48301429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               121-301
               

               Cow position:
               chr1:62469265-62469083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               83, 161
               

               Conread position:
               121-301
               

               Cow position:
               chr1:91796034-91796205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               121-303
               

               Cow position:
               chr1:42175935-42175747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-303
               

               Cow position:
               chr1:50585669-50585858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               121-306
               

               Cow position:
               chr1:39683935-39684127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               121-306
               

               Cow position:
               chr1:46939670-46939868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-306
               

               Cow position:
               chr1:89297900-89298093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 135
               

               Conread position:
               121-306
               

               Cow position:
               chr1:89301509-89301702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 135
               

               Conread position:
               121-306
               

               Cow position:
               chr1:102424002-102423810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               121-308
               

               Cow position:
               chr1:57575557-57575749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-314
               

               Cow position:
               chr1:69378391-69378589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               121-315
               

               Cow position:
               chr1:70483128-70483326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               121-316
               

               Cow position:
               chr1:81473365-81473162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               121-317
               

               Cow position:
               chr1:83004872-83004659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 172
               

               Conread position:
               121-318
               

               Cow position:
               chr1:87149609-87149810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-319
               

               Cow position:
               chr1:79663246-79663435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               185, 67
               

               Conread position:
               121-320
               

               Cow position:
               chr1:42775113-42774914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               121-321
               

               Cow position:
               chr1:102756230-102756431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               121-322
               

               Cow position:
               chr1:32014398-32014199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               121-322
               

               Cow position:
               chr1:41056886-41056679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               121-323
               

               Cow position:
               chr1:48618040-48618244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               121-324
               

               Cow position:
               chr1:43499103-43499297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-324
               

               Cow position:
               chr1:95156758-95156965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               121-329
               

               Cow position:
               chr1:85772211-85772003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               121-330
               

               Cow position:
               chr1:22729261-22729049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               121-330
               

               Cow position:
               chr1:24530705-24530495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               73, 197
               

               Conread position:
               121-330
               

               Cow position:
               chr1:71295097-71295303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               181, 31
               

               Conread position:
               121-330
               

               Cow position:
               chr1:78066336-78066544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               121-330
               

               Cow position:
               chr1:86056871-86057079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 144
               

               Conread position:
               121-330
               

               Cow position:
               chr1:86682361-86682567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               121-330
               

               Cow position:
               chr1:90904550-90904763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               121-333
               

               Cow position:
               chr1:68688786-68688573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-334
               

               Cow position:
               chr1:55753012-55753226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 172
               

               Conread position:
               121-335
               

               Cow position:
               chr1:76037306-76037528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 7
               

               Conread position:
               121-335
               

               Cow position:
               chr1:102768382-102768168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               121-336
               

               Cow position:
               chr1:8826-8602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:242759-242544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:15103091-15102876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               121-336
               

               Cow position:
               chr1:16855494-16855712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:19466243-19466040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:19515410-19515632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:20667543-20667755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:23968858-23969065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:25281470-25281670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               152, 38
               

               Conread position:
               121-336
               

               Cow position:
               chr1:29626704-29626925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               121-336
               

               Cow position:
               chr1:40192496-40192708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 130
               

               Conread position:
               121-336
               

               Cow position:
               chr1:44507175-44506960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               121-336
               

               Cow position:
               chr1:45019602-45019814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               121-336
               

               Cow position:
               chr1:49980915-49980697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               121-336
               

               Cow position:
               chr1:54478523-54478316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:56225989-56225772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:61391589-61391797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               121-336
               

               Cow position:
               chr1:66752425-66752642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:68763477-68763697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 166
               

               Conread position:
               121-336
               

               Cow position:
               chr1:69539892-69539678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               121-336
               

               Cow position:
               chr1:70435193-70434986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:74955825-74956030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:76735272-76735491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               121-336
               

               Cow position:
               chr1:79164875-79165095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               84, 125
               

               Conread position:
               121-336
               

               Cow position:
               chr1:81391129-81390909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               73, 127
               

               Conread position:
               121-336
               

               Cow position:
               chr1:91065950-91066164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:95558246-95558024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               121-336
               

               Cow position:
               chr1:97611467-97611673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               111, 7
               

               Conread position:
               121-336
               

               Cow position:
               chr1:101632145-101632350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr1:102648487-102648265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               121-337
               

               Cow position:
               chr1:20099554-20099355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 60
               

               Conread position:
               121-338
               

               Cow position:
               chr1:55685771-55685994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 75
               

               Conread position:
               121-339
               

               Cow position:
               chr1:43311565-43311788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               121-339
               

               Cow position:
               chr1:92075687-92075473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 129
               

               Conread position:
               121-340
               

               Cow position:
               chr1:100573421-100573643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               83, 208
               

               Conread position:
               121-343
               

               Cow position:
               chr1:56913325-56913553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 107
               

               Conread position:
               121-344
               

               Cow position:
               chr1:62142300-62142505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               191, 34
               

               Conread position:
               121-344
               

               Cow position:
               chr1:78794029-78794252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-345
               

               Cow position:
               chr1:10778761-10778541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               121-345
               

               Cow position:
               chr1:57089472-57089701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               121-345
               

               Cow position:
               chr1:78079930-78079697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               121-345
               

               Cow position:
               chr1:101860280-101860509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               121-346
               

               Cow position:
               chr1:21787530-21787313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               121-346
               

               Cow position:
               chr1:51417972-51417750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               121-346
               

               Cow position:
               chr1:64302043-64302268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               121-346
               

               Cow position:
               chr1:78811245-78811016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               87, 205
               

               Conread position:
               121-346
               

               Cow position:
               chr1:86579180-86578942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               121-346
               

               Cow position:
               chr1:93110425-93110640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               121-347
               

               Cow position:
               chr1:5006351-5006138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr1:6304670-6304887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               121-347
               

               Cow position:
               chr1:7748423-7748190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               121-347
               

               Cow position:
               chr1:7752587-7752356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 36
               

               Conread position:
               121-347
               

               Cow position:
               chr1:22192977-22192746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               67, 223
               

               Conread position:
               121-347
               

               Cow position:
               chr1:30189364-30189126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 179
               

               Conread position:
               121-347
               

               Cow position:
               chr1:33998956-33998735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr1:34160035-34159811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               140, 77
               

               Conread position:
               121-347
               

               Cow position:
               chr1:34771292-34771527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               121-347
               

               Cow position:
               chr1:37321803-37322021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               121-347
               

               Cow position:
               chr1:59519118-59518898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               121-347
               

               Cow position:
               chr1:62519573-62519341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 199
               

               Conread position:
               121-347
               

               Cow position:
               chr1:67919335-67919111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr1:68618733-68618954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 31
               

               Conread position:
               121-347
               

               Cow position:
               chr1:101822297-101822528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 207
               

               Conread position:
               121-347
               

               Cow position:
               chr1:102754057-102753830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               121-348
               

               Cow position:
               chr1:3923597-3923824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 218
               

               Conread position:
               121-348
               

               Cow position:
               chr1:7453121-7452894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 143
               

               Conread position:
               121-348
               

               Cow position:
               chr1:24777777-24778014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               121-348
               

               Cow position:
               chr1:34686372-34686165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               121-348
               

               Cow position:
               chr1:38205658-38205448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               219, 31
               

               Conread position:
               121-348
               

               Cow position:
               chr1:39417924-39418136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               121-348
               

               Cow position:
               chr1:42545594-42545806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               219, 7
               

               Conread position:
               121-348
               

               Cow position:
               chr1:53623163-53622933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               121-348
               

               Cow position:
               chr1:56477792-56477567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               122-228
               

               Cow position:
               chr1:51292348-51292240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-246
               

               Cow position:
               chr1:45680474-45680352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               122-248
               

               Cow position:
               chr1:75504884-75505008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               122-255
               

               Cow position:
               chr1:45233189-45233059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-258
               

               Cow position:
               chr1:8134131-8133988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 103
               

               Conread position:
               122-259
               

               Cow position:
               chr1:64706107-64705963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               122-262
               

               Cow position:
               chr1:70476547-70476690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               122-264
               

               Cow position:
               chr1:83246634-83246484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               122-265
               

               Cow position:
               chr1:36625724-36625573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-266
               

               Cow position:
               chr1:62181933-62182073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-266
               

               Cow position:
               chr1:89146666-89146818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-266
               

               Cow position:
               chr1:95654207-95654362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               122-271
               

               Cow position:
               chr1:42592079-42592234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 139
               

               Conread position:
               122-272
               

               Cow position:
               chr1:66445162-66445012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               122-277
               

               Cow position:
               chr1:15628485-15628328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-290
               

               Cow position:
               chr1:78700296-78700137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               162, 37
               

               Conread position:
               122-297
               

               Cow position:
               chr1:37695697-37695876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               122-301
               

               Cow position:
               chr1:74919769-74919957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-303
               

               Cow position:
               chr1:4329703-4329880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               122-306
               

               Cow position:
               chr1:525012-524825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               122-306
               

               Cow position:
               chr1:46004480-46004298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               122-307
               

               Cow position:
               chr1:5872568-5872763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-308
               

               Cow position:
               chr1:89835916-89835732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               122-309
               

               Cow position:
               chr1:25021872-25022061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-309
               

               Cow position:
               chr1:82538133-82537944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 166
               

               Conread position:
               122-310
               

               Cow position:
               chr1:33080605-33080796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               122-310
               

               Cow position:
               chr1:85622738-85622542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               122-312
               

               Cow position:
               chr1:97536484-97536301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-322
               

               Cow position:
               chr1:47658554-47658346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               122-324
               

               Cow position:
               chr1:1878229-1878019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               122-324
               

               Cow position:
               chr1:99604986-99605188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               122-324
               

               Cow position:
               chr1:101714321-101714119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 6
               

               Conread position:
               122-330
               

               Cow position:
               chr1:10633245-10633039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               122-330
               

               Cow position:
               chr1:42482406-42482195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               122-330
               

               Cow position:
               chr1:54206613-54206821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 157
               

               Conread position:
               122-330
               

               Cow position:
               chr1:78838993-78838789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               122-331
               

               Cow position:
               chr1:1496321-1496540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-333
               

               Cow position:
               chr1:74929502-74929727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               122-334
               

               Cow position:
               chr1:8128773-8128979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               122-334
               

               Cow position:
               chr1:31347727-31347945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               122-334
               

               Cow position:
               chr1:42887074-42887288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-334
               

               Cow position:
               chr1:72011616-72011824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-335
               

               Cow position:
               chr1:21955166-21955384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               122-335
               

               Cow position:
               chr1:35600084-35600308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-335
               

               Cow position:
               chr1:55705041-55705258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               122-335
               

               Cow position:
               chr1:62235250-62235458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               122-335
               

               Cow position:
               chr1:72092417-72092635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               122-335
               

               Cow position:
               chr1:86687955-86688168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               122-335
               

               Cow position:
               chr1:101634904-101634701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr1:49317295-49317509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr1:51394624-51394405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr1:68863225-68863022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr1:71665728-71665945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               122-336
               

               Cow position:
               chr1:88338856-88338654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr1:95101157-95100943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 186
               

               Conread position:
               122-342
               

               Cow position:
               chr1:68126984-68127209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               122-345
               

               Cow position:
               chr1:25735073-25734846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               83, 6
               

               Conread position:
               122-345
               

               Cow position:
               chr1:42868744-42868958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               122-345
               

               Cow position:
               chr1:100552172-100551948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               161, 72
               

               Conread position:
               122-346
               

               Cow position:
               chr1:6759838-6760057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr1:55230179-55229953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr1:71789942-71790171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               122-346
               

               Cow position:
               chr1:73457889-73458118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               122-346
               

               Cow position:
               chr1:74751422-74751658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr1:88360091-88359855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-347
               

               Cow position:
               chr1:90267930-90267695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 173
               

               Conread position:
               122-347
               

               Cow position:
               chr1:92524223-92523990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-348
               

               Cow position:
               chr1:49824860-49825090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               122-348
               

               Cow position:
               chr1:54156528-54156759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 160
               

               Conread position:
               122-348
               

               Cow position:
               chr1:63992128-63992360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               122-348
               

               Cow position:
               chr1:68817595-68817821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               122-348
               

               Cow position:
               chr1:96365855-96365639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               123-309
               

               Cow position:
               chr1:98060264-98060075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               123-336
               

               Cow position:
               chr1:71228300-71228080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 163
               

               Conread position:
               123-347
               

               Cow position:
               chr1:12464460-12464687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 211
               

               Conread position:
               124-298
               

               Cow position:
               chr1:96932461-96932298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               124-338
               

               Cow position:
               chr1:46143263-46143476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               125-290
               

               Cow position:
               chr1:45535970-45535796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               125-320
               

               Cow position:
               chr1:30949185-30948995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               125-330
               

               Cow position:
               chr1:97954280-97954475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               125-335
               

               Cow position:
               chr1:42541794-42541586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               125-336
               

               Cow position:
               chr1:77739927-77739709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 107
               

               Conread position:
               125-347
               

               Cow position:
               chr1:39224736-39224950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               125-348
               

               Cow position:
               chr1:3815478-3815711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               126-287
               

               Cow position:
               chr1:68730206-68730037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 162
               

               Conread position:
               126-287
               

               Cow position:
               chr1:92363468-92363627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               126-290
               

               Cow position:
               chr1:25956098-25955928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               126-297
               

               Cow position:
               chr1:90390197-90390356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               126-298
               

               Cow position:
               chr1:43296510-43296695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               126-300
               

               Cow position:
               chr1:1802372-1802190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               126-312
               

               Cow position:
               chr1:64458174-64457976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               126-322
               

               Cow position:
               chr1:69691509-69691714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               126-323
               

               Cow position:
               chr1:90595375-90595569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               182, 73
               

               Conread position:
               126-327
               

               Cow position:
               chr1:101439287-101439486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               126-329
               

               Cow position:
               chr1:89449100-89448894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               126-330
               

               Cow position:
               chr1:24581769-24581573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               126-330
               

               Cow position:
               chr1:58754596-58754801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               126-332
               

               Cow position:
               chr1:20125997-20125787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 123
               

               Conread position:
               126-334
               

               Cow position:
               chr1:759210-759429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               126-334
               

               Cow position:
               chr1:63079203-63078999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               126-334
               

               Cow position:
               chr1:79004178-79003965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 128
               

               Conread position:
               126-335
               

               Cow position:
               chr1:2462573-2462371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               126-336
               

               Cow position:
               chr1:46030162-46030374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 85
               

               Conread position:
               126-336
               

               Cow position:
               chr1:52052531-52052730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               126-336
               

               Cow position:
               chr1:67585753-67585547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               126-336
               

               Cow position:
               chr1:82880833-82880633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               126-336
               

               Cow position:
               chr1:93528896-93528686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               126-337
               

               Cow position:
               chr1:59147157-59147357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               126-337
               

               Cow position:
               chr1:95229147-95229345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               126-345
               

               Cow position:
               chr1:30983290-30983514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 163
               

               Conread position:
               126-345
               

               Cow position:
               chr1:45555567-45555344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               126-346
               

               Cow position:
               chr1:41027274-41027051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               68, 167
               

               Conread position:
               126-346
               

               Cow position:
               chr1:43872107-43872342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 160
               

               Conread position:
               126-347
               

               Cow position:
               chr1:5636870-5637083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               139, 62
               

               Conread position:
               126-347
               

               Cow position:
               chr1:23759967-23759757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               122, 62
               

               Conread position:
               126-347
               

               Cow position:
               chr1:31348236-31348460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               126-347
               

               Cow position:
               chr1:34856422-34856652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               126-347
               

               Cow position:
               chr1:53521107-53520888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               126-347
               

               Cow position:
               chr1:73721566-73721337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               67, 218
               

               Conread position:
               126-347
               

               Cow position:
               chr1:86113194-86113423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 209
               

               Conread position:
               126-347
               

               Cow position:
               chr1:96081681-96081456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               126-348
               

               Cow position:
               chr1:26427679-26427886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               126-348
               

               Cow position:
               chr1:31272253-31272466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               126-348
               

               Cow position:
               chr1:72813820-72813592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               126-348
               

               Cow position:
               chr1:82337578-82337801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 178
               

               Conread position:
               127-259
               

               Cow position:
               chr1:51626595-51626725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 67
               

               Conread position:
               127-266
               

               Cow position:
               chr1:80423531-80423675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-266
               

               Cow position:
               chr1:95976534-95976390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               127-267
               

               Cow position:
               chr1:3034007-3034143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               127-267
               

               Cow position:
               chr1:69678122-69678269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               127-268
               

               Cow position:
               chr1:5849446-5849313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               127-269
               

               Cow position:
               chr1:57395304-57395453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               127-281
               

               Cow position:
               chr1:53474349-53474198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               127-282
               

               Cow position:
               chr1:19384256-19384415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               127-285
               

               Cow position:
               chr1:53457013-53456849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 143
               

               Conread position:
               127-286
               

               Cow position:
               chr1:69442314-69442481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               127-289
               

               Cow position:
               chr1:22637224-22637389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               127-297
               

               Cow position:
               chr1:78784700-78784878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               127-298
               

               Cow position:
               chr1:100513098-100512922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 112
               

               Conread position:
               127-301
               

               Cow position:
               chr1:96201114-96201294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               127-303
               

               Cow position:
               chr1:101692076-101691900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               127-306
               

               Cow position:
               chr1:58420399-58420220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 143
               

               Conread position:
               127-306
               

               Cow position:
               chr1:77685777-77685964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               127-312
               

               Cow position:
               chr1:68710485-68710290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 189
               

               Conread position:
               127-314
               

               Cow position:
               chr1:22828372-22828561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               127-315
               

               Cow position:
               chr1:69411494-69411690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               127-315
               

               Cow position:
               chr1:71945879-71946076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               127-316
               

               Cow position:
               chr1:34001244-34001054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               127-316
               

               Cow position:
               chr1:63994354-63994548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-317
               

               Cow position:
               chr1:52450963-52450777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               127-322
               

               Cow position:
               chr1:98583949-98583753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               127-324
               

               Cow position:
               chr1:21130927-21131118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               146, 63
               

               Conread position:
               127-324
               

               Cow position:
               chr1:62964469-62964265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-327
               

               Cow position:
               chr1:100852903-100852705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               127-329
               

               Cow position:
               chr1:6590238-6590027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-329
               

               Cow position:
               chr1:23186601-23186804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               127-329
               

               Cow position:
               chr1:52139427-52139640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               127-329
               

               Cow position:
               chr1:81568828-81569034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-329
               

               Cow position:
               chr1:82513151-82513359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               127-329
               

               Cow position:
               chr1:88913521-88913314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               127-330
               

               Cow position:
               chr1:89388544-89388333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-330
               

               Cow position:
               chr1:102785147-102784951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               127-331
               

               Cow position:
               chr1:20104467-20104258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-331
               

               Cow position:
               chr1:97540840-97540627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               127-332
               

               Cow position:
               chr1:40212147-40212341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 129
               

               Conread position:
               127-333
               

               Cow position:
               chr1:8788491-8788281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               127-333
               

               Cow position:
               chr1:48206339-48206541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               127-333
               

               Cow position:
               chr1:61005356-61005572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               127-333
               

               Cow position:
               chr1:67654124-67654330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               127-333
               

               Cow position:
               chr1:70538807-70538601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-333
               

               Cow position:
               chr1:97833898-97833702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-334
               

               Cow position:
               chr1:45315430-45315647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               127-334
               

               Cow position:
               chr1:78857125-78857340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               127-334
               

               Cow position:
               chr1:86110544-86110748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               127-334
               

               Cow position:
               chr1:91023267-91023476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               127-335
               

               Cow position:
               chr1:4582751-4582538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               127-335
               

               Cow position:
               chr1:13157395-13157173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-335
               

               Cow position:
               chr1:13684905-13685110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               127-335
               

               Cow position:
               chr1:56225667-56225457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               127-336
               

               Cow position:
               chr1:5751516-5751300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr1:6790975-6790762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 150
               

               Conread position:
               127-336
               

               Cow position:
               chr1:16060807-16061017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr1:16766885-16767097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 171
               

               Conread position:
               127-336
               

               Cow position:
               chr1:35162606-35162397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               127-336
               

               Cow position:
               chr1:50765815-50765599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               127-336
               

               Cow position:
               chr1:51860363-51860574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr1:71350523-71350740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr1:72034727-72034936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               127-336
               

               Cow position:
               chr1:76612931-76613148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr1:79719009-79718797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 110
               

               Conread position:
               127-338
               

               Cow position:
               chr1:6381977-6381757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               127-338
               

               Cow position:
               chr1:79630718-79630917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               127-342
               

               Cow position:
               chr1:13547783-13548004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               127-344
               

               Cow position:
               chr1:81858700-81858923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-345
               

               Cow position:
               chr1:22035809-22035590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 207
               

               Conread position:
               127-345
               

               Cow position:
               chr1:64678881-64678673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               127-345
               

               Cow position:
               chr1:64803896-64804124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-345
               

               Cow position:
               chr1:98897489-98897716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               127-346
               

               Cow position:
               chr1:38706652-38706877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               127-346
               

               Cow position:
               chr1:70175340-70175562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-346
               

               Cow position:
               chr1:75250313-75250092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               127-346
               

               Cow position:
               chr1:90621305-90621528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 51
               

               Conread position:
               127-347
               

               Cow position:
               chr1:22943827-22944048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 157
               

               Conread position:
               127-347
               

               Cow position:
               chr1:41289577-41289800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 215
               

               Conread position:
               127-347
               

               Cow position:
               chr1:52661975-52662196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               127-347
               

               Cow position:
               chr1:53374628-53374410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               127-347
               

               Cow position:
               chr1:61885113-61884889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr1:65318778-65318551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               67, 105
               

               Conread position:
               127-347
               

               Cow position:
               chr1:75383164-75382957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr1:84811740-84811963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr1:89509730-89509945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               168, 9
               

               Conread position:
               127-347
               

               Cow position:
               chr1:95835594-95835821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               67, 219
               

               Conread position:
               127-347
               

               Cow position:
               chr1:100474440-100474210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr1:102305946-102306163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               127-348
               

               Cow position:
               chr1:6731380-6731155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               76, 202
               

               Conread position:
               127-348
               

               Cow position:
               chr1:9534343-9534138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               127-348
               

               Cow position:
               chr1:38754118-38753896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               209, 77
               

               Conread position:
               127-348
               

               Cow position:
               chr1:45576121-45575910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               127-348
               

               Cow position:
               chr1:81515440-81515206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               76, 165
               

               Conread position:
               127-348
               

               Cow position:
               chr1:95618842-95618617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-348
               

               Cow position:
               chr1:95828934-95829143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               127-348
               

               Cow position:
               chr1:97303052-97303274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               127-348
               

               Cow position:
               chr1:100823241-100823013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 180
               

               Conread position:
               128-246
               

               Cow position:
               chr1:80733195-80733079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               128-274
               

               Cow position:
               chr1:99031776-99031930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               128-290
               

               Cow position:
               chr1:64421736-64421574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               128-296
               

               Cow position:
               chr1:100800569-100800742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               128-297
               

               Cow position:
               chr1:19599160-19599335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               128-301
               

               Cow position:
               chr1:11770042-11770214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               128-301
               

               Cow position:
               chr1:71636128-71636301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               59, 101
               

               Conread position:
               128-301
               

               Cow position:
               chr1:83682972-83683149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               128-302
               

               Cow position:
               chr1:11708824-11708997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 97
               

               Conread position:
               128-306
               

               Cow position:
               chr1:49297851-49297668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               128-308
               

               Cow position:
               chr1:47966820-47967008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               128-309
               

               Cow position:
               chr1:85339577-85339401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               128-328
               

               Cow position:
               chr1:79640089-79640293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               128-332
               

               Cow position:
               chr1:3942016-3942224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               128-333
               

               Cow position:
               chr1:100422020-100421815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               128-335
               

               Cow position:
               chr1:17875513-17875719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               128-336
               

               Cow position:
               chr1:852373-852157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               128-336
               

               Cow position:
               chr1:42152289-42152498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               145, 65
               

               Conread position:
               128-338
               

               Cow position:
               chr1:15547665-15547457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               128-341
               

               Cow position:
               chr1:55357089-55357305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 172
               

               Conread position:
               128-344
               

               Cow position:
               chr1:42555443-42555245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               128-345
               

               Cow position:
               chr1:71119721-71119498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               128-346
               

               Cow position:
               chr1:21578010-21577785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               128-346
               

               Cow position:
               chr1:96472615-96472416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               128-346
               

               Cow position:
               chr1:102266070-102266291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               128-347
               

               Cow position:
               chr1:60045187-60044964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 97
               

               Conread position:
               128-347
               

               Cow position:
               chr1:67529256-67529031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               128-348
               

               Cow position:
               chr1:724939-724715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               128-348
               

               Cow position:
               chr1:6394757-6394532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               128-348
               

               Cow position:
               chr1:29474152-29474372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               128-348
               

               Cow position:
               chr1:82936405-82936621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               129-259
               

               Cow position:
               chr1:40724791-40724660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               129-266
               

               Cow position:
               chr1:96362239-96362369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               129-277
               

               Cow position:
               chr1:10523898-10523746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               129-309
               

               Cow position:
               chr1:29671021-29671210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               129-336
               

               Cow position:
               chr1:96558647-96558863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               129-346
               

               Cow position:
               chr1:81481186-81481406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               129-347
               

               Cow position:
               chr1:7740142-7739925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               129-347
               

               Cow position:
               chr1:80584627-80584405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 99
               

               Conread position:
               129-348
               

               Cow position:
               chr1:500375-500150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               129-348
               

               Cow position:
               chr1:27145445-27145676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 153
               

               Conread position:
               129-348
               

               Cow position:
               chr1:94226345-94226579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               63, 189
               

               Conread position:
               131-235
               

               Cow position:
               chr1:68857680-68857576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               131-298
               

               Cow position:
               chr1:3607992-3607829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               131-309
               

               Cow position:
               chr1:38055308-38055487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               5, 27
               

               Conread position:
               131-316
               

               Cow position:
               chr1:77810566-77810750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               131-322
               

               Cow position:
               chr1:101788900-101789088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 159
               

               Conread position:
               131-336
               

               Cow position:
               chr1:43148340-43148561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               131-347
               

               Cow position:
               chr1:81582292-81582089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               162, 53
               

               Conread position:
               132-264
               

               Cow position:
               chr1:67743542-67743677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               132-266
               

               Cow position:
               chr1:48695352-48695492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               132-301
               

               Cow position:
               chr1:23373057-23372881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               132-310
               

               Cow position:
               chr1:70416564-70416747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               132-329
               

               Cow position:
               chr1:11488962-11489167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               132-331
               

               Cow position:
               chr1:97717380-97717580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 109
               

               Conread position:
               132-334
               

               Cow position:
               chr1:68845310-68845495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               132-348
               

               Cow position:
               chr1:37726218-37726444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 217
               

               Conread position:
               133-261
               

               Cow position:
               chr1:71321808-71321938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               133-317
               

               Cow position:
               chr1:731775-731970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               133-334
               

               Cow position:
               chr1:635489-635696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 158
               

               Conread position:
               133-336
               

               Cow position:
               chr1:61011370-61011168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               133-347
               

               Cow position:
               chr1:24406719-24406921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               134-266
               

               Cow position:
               chr1:91743269-91743405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               134-277
               

               Cow position:
               chr1:67674414-67674557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-302
               

               Cow position:
               chr1:45099950-45099782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 158
               

               Conread position:
               134-302
               

               Cow position:
               chr1:78034711-78034883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               134-323
               

               Cow position:
               chr1:23633733-23633932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               134-323
               

               Cow position:
               chr1:31357320-31357509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               134-330
               

               Cow position:
               chr1:100762268-100762070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               70, 159
               

               Conread position:
               134-335
               

               Cow position:
               chr1:19144741-19144941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               165, 67
               

               Conread position:
               134-342
               

               Cow position:
               chr1:101267808-101268020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               134-346
               

               Cow position:
               chr1:47886286-47886506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               134-346
               

               Cow position:
               chr1:97090511-97090303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               134-347
               

               Cow position:
               chr1:60987186-60986964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               134-348
               

               Cow position:
               chr1:49082940-49082718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               134-348
               

               Cow position:
               chr1:54258763-54258542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 128
               

               Conread position:
               135-264
               

               Cow position:
               chr1:39703145-39703023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               135-289
               

               Cow position:
               chr1:100741475-100741312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               135-290
               

               Cow position:
               chr1:61134608-61134445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               135-301
               

               Cow position:
               chr1:40181428-40181603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               135-306
               

               Cow position:
               chr1:63905071-63905242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               135-310
               

               Cow position:
               chr1:81668619-81668804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               135-313
               

               Cow position:
               chr1:76698856-76699021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               135-317
               

               Cow position:
               chr1:78793810-78793997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               135-317
               

               Cow position:
               chr1:88391294-88391109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               135-333
               

               Cow position:
               chr1:64113607-64113801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 64
               

               Conread position:
               135-335
               

               Cow position:
               chr1:77720067-77720255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               135-346
               

               Cow position:
               chr1:6941659-6941437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               135-346
               

               Cow position:
               chr1:6959072-6958850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               135-346
               

               Cow position:
               chr1:11729365-11729153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               135-346
               

               Cow position:
               chr1:11913688-11913902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               135-346
               

               Cow position:
               chr1:62034642-62034850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               135-346
               

               Cow position:
               chr1:99629355-99629154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               135-347
               

               Cow position:
               chr1:2972113-2971892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 164
               

               Conread position:
               135-347
               

               Cow position:
               chr1:45223769-45223558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               136-266
               

               Cow position:
               chr1:37503690-37503814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               136-299
               

               Cow position:
               chr1:22394481-22394648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 155
               

               Conread position:
               136-330
               

               Cow position:
               chr1:71078770-71078967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 151
               

               Conread position:
               136-330
               

               Cow position:
               chr1:83024973-83025171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               136-338
               

               Cow position:
               chr1:97962817-97962628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               136-344
               

               Cow position:
               chr1:88112049-88111854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               136-348
               

               Cow position:
               chr1:87095019-87095239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               136-348
               

               Cow position:
               chr1:89381466-89381252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 200
               

               Conread position:
               137-266
               

               Cow position:
               chr1:45505741-45505870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               137-330
               

               Cow position:
               chr1:17196434-17196634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 167
               

               Conread position:
               137-330
               

               Cow position:
               chr1:95499305-95499503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               137-333
               

               Cow position:
               chr1:43388863-43389058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               137-346
               

               Cow position:
               chr1:72285880-72286091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               137-346
               

               Cow position:
               chr1:98413967-98413749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               137-348
               

               Cow position:
               chr1:52369990-52370188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               138-333
               

               Cow position:
               chr1:22461049-22461248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               138-346
               

               Cow position:
               chr1:98031105-98030898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               198, 16
               

               Conread position:
               138-347
               

               Cow position:
               chr1:21093309-21093094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               139-336
               

               Cow position:
               chr1:31256041-31256235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 154
               

               Conread position:
               139-345
               

               Cow position:
               chr1:2975800-2976017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 200
               

               Conread position:
               139-346
               

               Cow position:
               chr1:89728428-89728626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               139-347
               

               Cow position:
               chr1:78097115-78096904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               69, 191
               

               Conread position:
               140-336
               

               Cow position:
               chr1:69940636-69940836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               140-347
               

               Cow position:
               chr1:89157942-89158148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               125, 136
               

               Conread position:
               142-318
               

               Cow position:
               chr1:31630097-31630282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               142-334
               

               Cow position:
               chr1:6031814-6031613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               142-336
               

               Cow position:
               chr1:3417537-3417335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               142-346
               

               Cow position:
               chr1:1053768-1053558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 125
               

               Conread position:
               143-348
               

               Cow position:
               chr1:99642184-99642392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 165
               

               Conread position:
               145-301
               

               Cow position:
               chr1:81471534-81471379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               147-345
               

               Cow position:
               chr1:4291335-4291144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               145, 28
               

               Conread position:
               148-334
               

               Cow position:
               chr1:22827326-22827146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               125, 46
               

               Conread position:
               148-336
               

               Cow position:
               chr1:66430454-66430280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               149-310
               

               Cow position:
               chr1:81179168-81179335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               152-307
               

               Cow position:
               chr1:70146732-70146895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               152-324
               

               Cow position:
               chr1:53398149-53397974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               152-334
               

               Cow position:
               chr1:13637489-13637674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               157-347
               

               Cow position:
               chr1:76019526-76019718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               160-266
               

               Cow position:
               chr1:45449465-45449359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               160-285
               

               Cow position:
               chr1:91810913-91810784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               160-336
               

               Cow position:
               chr1:24534093-24534267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               160-336
               

               Cow position:
               chr1:69694830-69695005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               160-348
               

               Cow position:
               chr1:3762297-3762480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               161-336
               

               Cow position:
               chr1:91811949-91811769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 141
               

               Conread position:
               167-334
               

               Cow position:
               chr1:52039794-52039627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 103
               

               Conread position:
               170-347
               

               Cow position:
               chr1:36875179-36875006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               175-336
               

               Cow position:
               chr1:54732341-54732498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               182-310
               

               Cow position:
               chr1:46100699-46100827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-336
               

               Cow position:
               chr1:98512069-98511914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               182-347
               

               Cow position:
               chr1:53308253-53308414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               183-336
               

               Cow position:
               chr1:24570807-24570960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               185-336
               

               Cow position:
               chr1:45873930-45874091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               186-343
               

               Cow position:
               chr1:64019384-64019542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               186-347
               

               Cow position:
               chr1:39068821-39068980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               186-347
               

               Cow position:
               chr1:98576184-98576025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               186-348
               

               Cow position:
               chr1:98594702-98594548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               190-346
               

               Cow position:
               chr1:71915983-71916142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 113
               

               Conread position:
               191-330
               

               Cow position:
               chr1:84255899-84255760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               195-335
               

               Cow position:
               chr1:8670904-8670761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-336
               

               Cow position:
               chr1:54157426-54157281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-336
               

               Cow position:
               chr1:93810557-93810416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               195-336
               

               Cow position:
               chr1:95974529-95974387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               195-342
               

               Cow position:
               chr1:3914791-3914937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               196-323
               

               Cow position:
               chr1:49839613-49839485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               196-334
               

               Cow position:
               chr1:36932282-36932144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               196-336
               

               Cow position:
               chr1:56711474-56711612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               196-336
               

               Cow position:
               chr1:65881932-65881794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               196-336
               

               Cow position:
               chr1:73936015-73936158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               196-338
               

               Cow position:
               chr1:89741866-89742015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               196-339
               

               Cow position:
               chr1:98684000-98683858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               196-345
               

               Cow position:
               chr1:13576753-13576908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               196-345
               

               Cow position:
               chr1:95153349-95153201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               196-346
               

               Cow position:
               chr1:69481821-69481970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               196-347
               

               Cow position:
               chr1:5135582-5135733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               196-347
               

               Cow position:
               chr1:43311904-43312055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-347
               

               Cow position:
               chr1:48730704-48730854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               196-347
               

               Cow position:
               chr1:50992061-50991910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 140
               

               Conread position:
               196-347
               

               Cow position:
               chr1:85549950-85550102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-334
               

               Cow position:
               chr1:42537196-42537334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               197-336
               

               Cow position:
               chr1:77683477-77683339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               197-347
               

               Cow position:
               chr1:88618722-88618571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               198-347
               

               Cow position:
               chr1:30504626-30504477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               198-348
               

               Cow position:
               chr1:30417921-30418067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               199-348
               

               Cow position:
               chr1:23512534-23512684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               200-348
               

               Cow position:
               chr1:31390465-31390614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               201-346
               

               Cow position:
               chr1:48769924-48769780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               202-336
               

               Cow position:
               chr1:72141693-72141564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               203-346
               

               Cow position:
               chr1:39121715-39121859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               203-346
               

               Cow position:
               chr1:69264929-69264786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               204-335
               

               Cow position:
               chr1:31599043-31598913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               204-343
               

               Cow position:
               chr1:19304689-19304551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 64
               

               Conread position:
               205-331
               

               Cow position:
               chr1:42178863-42178737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-333
               

               Cow position:
               chr1:83301832-83301962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               205-334
               

               Cow position:
               chr1:31855129-31855258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-336
               

               Cow position:
               chr1:45478745-45478872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               205-339
               

               Cow position:
               chr1:42360406-42360270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               205-345
               

               Cow position:
               chr1:80336131-80336271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-346
               

               Cow position:
               chr1:84768761-84768902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-346
               

               Cow position:
               chr1:93554954-93554813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-347
               

               Cow position:
               chr1:4032750-4032607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               205-347
               

               Cow position:
               chr1:81580295-81580154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               205-347
               

               Cow position:
               chr1:81809021-81809161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               205-348
               

               Cow position:
               chr1:21823480-21823337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-348
               

               Cow position:
               chr1:31499743-31499600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               205-348
               

               Cow position:
               chr1:95676173-95676315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               139, 11
               

               Conread position:
               206-345
               

               Cow position:
               chr1:8347240-8347101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-346
               

               Cow position:
               chr1:58037135-58036996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               206-348
               

               Cow position:
               chr1:19885498-19885357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               210-319
               

               Cow position:
               chr1:6989263-6989154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-336
               

               Cow position:
               chr1:61542806-61542931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               210-347
               

               Cow position:
               chr1:37309406-37309543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-348
               

               Cow position:
               chr1:95215077-95215215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-345
               

               Cow position:
               chr1:85647673-85647802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-347
               

               Cow position:
               chr1:4581221-4581354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-347
               

               Cow position:
               chr1:89350074-89349941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-348
               

               Cow position:
               chr1:75142104-75141972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-347
               

               Cow position:
               chr1:81868623-81868753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-346
               

               Cow position:
               chr1:45288766-45288894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-348
               

               Cow position:
               chr1:56635202-56635073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 109
               

               Conread position:
               224-348
               

               Cow position:
               chr1:43703508-43703384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-348
               

               Cow position:
               chr1:53425276-53425151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               226-346
               

               Cow position:
               chr1:55146895-55146777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.
Conread position:	70-266
Cow position:	chr1:73397817-73398017 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	145
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	121, 38
Conread position:	72-309
Cow position:	chr1:1347379-1347621 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	165
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	22, 35
Conread position:	75-263
Cow position:	chr1:47190741-47190935 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	141
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	24, 9
Conread position:	83-321
Cow position:	chr1:82336913-82336680 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	161
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	133, 25
Conread position:	85-335
Cow position:	chr1:484227-484480 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	178
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	114, 10
Conread position:	85-348
Cow position:	chr1:15334129-15333868 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	199
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	109, 18
Conread position:	86-347
Cow position:	chr1:96599063-96599313 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	195
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	6, 31
Conread position:	87-333
Cow position:	chr1:196762-197015 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	183
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	26, 0
Conread position:	87-334
Cow position:	chr1:52467524-52467293 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	180
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	15, 33
Conread position:	87-347
Cow position:	chr1:49753723-49753457 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	174
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	101, 19
Conread position:	88-301
Cow position:	chr1:20537442-20537227 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	158
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	14, 47
Conread position:	88-310
Cow position:	chr1:76518662-76518435 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	165
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	106, 18
Conread position:	89-322
Cow position:	chr1:100324521-100324748 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	164
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	41, 0
Conread position:	89-347
Cow position:	chr1:60281588-60281349 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	181
Alignm E-value:	6e-27
Alignm gaps (pig, cow):	71, 0
Conread position:	90-336
Cow position:	chr1:46245499-46245762 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	188
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	79, 38
Conread position:	90-345
Cow position:	chr1:98468039-98467782 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	183
Alignm E-value:	6e-27
Alignm gaps (pig, cow):	77, 38
Conread position:	91-322
Cow position:	chr1:93499852-93499621 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	167
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	117, 27
Conread position:	91-323
Cow position:	chr1:87220679-87220460 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	174
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	16, 37
Conread position:	92-335
Cow position:	chr1:51968763-51968525 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	135
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	60, 0
Conread position:	95-330
Cow position:	chr1:87198059-87197813 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	178
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	58, 20