Cow genome map

Conread name: Ss1.1-rspc008_f14.5

Conread position: 78-336
Cow position: chr21:40475808-40475544 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 50

Conread position: 90-308
Cow position: chr21:8506250-8506473 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 90-308
Cow position: chr21:8509138-8509361 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 92-259
Cow position: chr21:17072891-17072724 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 141, 27

Conread position: 95-348
Cow position: chr21:28919241-28919490 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 38

Conread position: 98-260
Cow position: chr21:33244596-33244750 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 99-346
Cow position: chr21:11174530-11174274 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 29

Conread position: 101-295
Cow position: chr21:11678037-11678226 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 102-348
Cow position: chr21:39319127-39319377 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 14

Conread position: 104-276
Cow position: chr21:5345162-5344983 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 86, 24

Conread position: 104-330
Cow position: chr21:19059810-19060039 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 24

Conread position: 104-336
Cow position: chr21:30938384-30938627 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 106-264
Cow position: chr21:16119879-16120044 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 54

Conread position: 108-298
Cow position: chr21:20413103-20412910 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 10

Conread position: 108-347
Cow position: chr21:8545742-8545984 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 191

Conread position: 109-240
Cow position: chr21:5489029-5488890 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 109-309
Cow position: chr21:13883754-13883553 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 41

Conread position: 109-309
Cow position: chr21:27409462-27409660 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 24

Conread position: 109-312
Cow position: chr21:646037-646244 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 128

Conread position: 109-320
Cow position: chr21:21940135-21940346 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 19

Conread position: 109-324
Cow position: chr21:16498789-16498576 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 18

Conread position: 109-330
Cow position: chr21:44251565-44251792 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 19

Conread position: 109-345
Cow position: chr21:4281609-4281839 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 9

Conread position: 109-346
Cow position: chr21:21907165-21907393 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 25

Conread position: 109-347
Cow position: chr21:11755488-11755731 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 19

Conread position: 109-347
Cow position: chr21:36022911-36023156 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 19

Conread position: 110-266
Cow position: chr21:12473787-12473945 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 18

Conread position: 110-287
Cow position: chr21:30031120-30031292 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 15

Conread position: 110-289
Cow position: chr21:3178120-3177939 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 18

Conread position: 110-317
Cow position: chr21:24351125-24350916 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 11

Conread position: 110-337
Cow position: chr21:36763337-36763105 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 15

Conread position: 110-346
Cow position: chr21:17184194-17183957 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 8

Conread position: 110-347
Cow position: chr21:20165914-20165676 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 18

Conread position: 110-347
Cow position: chr21:42841309-42841563 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 110-348
Cow position: chr21:9278805-9278557 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 235

Conread position: 110-348
Cow position: chr21:40266399-40266158 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 18

Conread position: 111-211
Cow position: chr21:43264902-43265001 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 111-320
Cow position: chr21:49699763-49699979 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 17

Conread position: 111-323
Cow position: chr21:34738846-34738635 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 95, 41

Conread position: 111-331
Cow position: chr21:6154074-6153852 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 17

Conread position: 111-334
Cow position: chr21:8430823-8431053 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 7

Conread position: 111-336
Cow position: chr21:17432997-17433224 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 7

Conread position: 112-264
Cow position: chr21:30359077-30359228 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 16

Conread position: 112-310
Cow position: chr21:26828698-26828900 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 16

Conread position: 112-312
Cow position: chr21:27521069-27521270 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 16

Conread position: 113-290
Cow position: chr21:42455131-42454952 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 173

Conread position: 113-329
Cow position: chr21:30145359-30145576 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 92

Conread position: 113-347
Cow position: chr21:47321-47074 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 114-314
Cow position: chr21:43655974-43655771 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 123

Conread position: 114-323
Cow position: chr21:44214382-44214185 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 114-330
Cow position: chr21:30222614-30222396 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 114-335
Cow position: chr21:33982542-33982761 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 165

Conread position: 114-347
Cow position: chr21:42501324-42501078 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 190

Conread position: 116-301
Cow position: chr21:41738177-41737988 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 12

Conread position: 116-336
Cow position: chr21:13395851-13395636 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 152, 44

Conread position: 116-346
Cow position: chr21:868649-868890 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 116-347
Cow position: chr21:37706143-37706381 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 12

Conread position: 117-267
Cow position: chr21:37480233-37480079 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 117-347
Cow position: chr21:38728425-38728188 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 118-267
Cow position: chr21:18497731-18497880 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 118-282
Cow position: chr21:2294278-2294122 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 118-282
Cow position: chr21:3379485-3379653 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 118-295
Cow position: chr21:15271172-15271351 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 10

Conread position: 118-296
Cow position: chr21:6945628-6945460 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 118-330
Cow position: chr21:641852-641638 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 118-330
Cow position: chr21:643588-643375 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 32

Conread position: 118-330
Cow position: chr21:17519295-17519072 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 10

Conread position: 118-330
Cow position: chr21:37928918-37928700 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 10

Conread position: 118-335
Cow position: chr21:31652654-31652434 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 10

Conread position: 118-336
Cow position: chr21:13584784-13585014 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 196

Conread position: 118-336
Cow position: chr21:40291481-40291701 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 154

Conread position: 118-345
Cow position: chr21:19958483-19958250 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 10

Conread position: 118-345
Cow position: chr21:40589212-40589447 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 229

Conread position: 118-346
Cow position: chr21:42145086-42144861 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 10

Conread position: 118-347
Cow position: chr21:23979911-23980148 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 118-348
Cow position: chr21:6834317-6834082 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 10

Conread position: 118-348
Cow position: chr21:13589030-13588796 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 113

Conread position: 119-329
Cow position: chr21:2536870-2537087 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 15

Conread position: 119-332
Cow position: chr21:4400060-4399853 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 119-345
Cow position: chr21:957935-957709 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 9

Conread position: 119-345
Cow position: chr21:44724109-44724332 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 85, 122

Conread position: 119-346
Cow position: chr21:45970913-45971137 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 15, 0

Conread position: 120-345
Cow position: chr21:47363458-47363700 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 58

Conread position: 120-347
Cow position: chr21:17252711-17252944 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 84, 177

Conread position: 121-245
Cow position: chr21:908183-908307 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 121-260
Cow position: chr21:40571206-40571345 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 72

Conread position: 121-263
Cow position: chr21:38867113-38867249 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 32

Conread position: 121-264
Cow position: chr21:45537456-45537301 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 121-266
Cow position: chr21:28604347-28604206 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 34

Conread position: 121-271
Cow position: chr21:6042054-6041894 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 121-280
Cow position: chr21:45376212-45376049 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 121-287
Cow position: chr21:21159068-21158905 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 121-287
Cow position: chr21:44732778-44732949 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 164

Conread position: 121-289
Cow position: chr21:438821-438654 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 121-289
Cow position: chr21:3135603-3135777 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 36

Conread position: 121-289
Cow position: chr21:8523897-8523733 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 121-290
Cow position: chr21:23348335-23348500 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 63

Conread position: 121-290
Cow position: chr21:29011711-29011879 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 115

Conread position: 121-297
Cow position: chr21:29418838-29418652 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 121-298
Cow position: chr21:12298852-12298677 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 121-301
Cow position: chr21:27744294-27744105 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 121-301
Cow position: chr21:37360974-37361162 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 121-315
Cow position: chr21:8986291-8986088 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 177

Conread position: 121-316
Cow position: chr21:5214621-5214415 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 199

Conread position: 121-322
Cow position: chr21:20548100-20548301 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 121-326
Cow position: chr21:26735662-26735464 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 121-329
Cow position: chr21:40820586-40820801 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 121-330
Cow position: chr21:18155299-18155515 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 121-330
Cow position: chr21:26018646-26018430 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 138

Conread position: 121-330
Cow position: chr21:39394014-39393799 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 121-333
Cow position: chr21:8240577-8240360 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 177

Conread position: 121-333
Cow position: chr21:9905597-9905801 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 121-333
Cow position: chr21:13304060-13303840 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 121-334
Cow position: chr21:14452498-14452281 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 36

Conread position: 121-334
Cow position: chr21:38449187-38449398 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 160

Conread position: 121-335
Cow position: chr21:9477429-9477210 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 184

Conread position: 121-335
Cow position: chr21:29213894-29214114 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 20

Conread position: 121-335
Cow position: chr21:30835631-30835412 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 187

Conread position: 121-336
Cow position: chr21:5427192-5426985 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 121-336
Cow position: chr21:11779273-11779491 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 144

Conread position: 121-336
Cow position: chr21:20318778-20318558 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 170

Conread position: 121-336
Cow position: chr21:25014775-25014981 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 121-336
Cow position: chr21:28733646-28733867 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 6, 26

Conread position: 121-336
Cow position: chr21:31253794-31253582 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 18

Conread position: 121-336
Cow position: chr21:32392798-32393012 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 13

Conread position: 121-336
Cow position: chr21:34010131-34010349 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 65, 129

Conread position: 121-336
Cow position: chr21:36508495-36508283 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 87, 31

Conread position: 121-336
Cow position: chr21:38901028-38900819 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 121-336
Cow position: chr21:41041213-41040989 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 121-336
Cow position: chr21:41917974-41918197 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 72, 48

Conread position: 121-337
Cow position: chr21:12349033-12348809 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 176

Conread position: 121-338
Cow position: chr21:8924636-8924407 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 50

Conread position: 121-345
Cow position: chr21:6051770-6051539 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 121-345
Cow position: chr21:7768691-7768474 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 31

Conread position: 121-345
Cow position: chr21:21616041-21615818 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 31

Conread position: 121-346
Cow position: chr21:8207022-8206807 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 121-346
Cow position: chr21:10673375-10673155 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 68

Conread position: 121-346
Cow position: chr21:12461704-12461932 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 121-346
Cow position: chr21:38720514-38720285 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 102

Conread position: 121-346
Cow position: chr21:41140451-41140682 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 12

Conread position: 121-347
Cow position: chr21:5898144-5898367 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 121-347
Cow position: chr21:6713259-6713492 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 0

Conread position: 121-347
Cow position: chr21:14464851-14464613 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 121-347
Cow position: chr21:15911643-15911437 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 31

Conread position: 121-347
Cow position: chr21:44591938-44592175 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 121-347
Cow position: chr21:46451707-46451918 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 121-348
Cow position: chr21:5970581-5970806 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 191, 82

Conread position: 121-348
Cow position: chr21:12154390-12154163 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 83, 130

Conread position: 122-260
Cow position: chr21:24222253-24222392 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 122-266
Cow position: chr21:8358965-8359110 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 29

Conread position: 122-271
Cow position: chr21:21145652-21145507 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 122-297
Cow position: chr21:9301489-9301307 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 122-297
Cow position: chr21:15305031-15305215 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 122-297
Cow position: chr21:18450019-18449837 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 159

Conread position: 122-298
Cow position: chr21:1464607-1464426 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 30

Conread position: 122-306
Cow position: chr21:15444818-15445002 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 159

Conread position: 122-314
Cow position: chr21:11182813-11182620 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 48

Conread position: 122-314
Cow position: chr21:42146408-42146213 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 68, 26

Conread position: 122-319
Cow position: chr21:745434-745238 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 82, 118

Conread position: 122-319
Cow position: chr21:42189496-42189697 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 122-322
Cow position: chr21:31658890-31659088 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 179

Conread position: 122-324
Cow position: chr21:39403264-39403468 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 122-330
Cow position: chr21:6851429-6851223 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 122-330
Cow position: chr21:19868699-19868904 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 122-335
Cow position: chr21:31279517-31279302 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 122-335
Cow position: chr21:33580675-33580466 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 51

Conread position: 122-345
Cow position: chr21:27677747-27677518 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 185

Conread position: 122-346
Cow position: chr21:3585100-3585333 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 0

Conread position: 122-346
Cow position: chr21:18064662-18064878 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 68

Conread position: 122-346
Cow position: chr21:43693081-43692852 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 49

Conread position: 122-347
Cow position: chr21:8713693-8713925 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 218

Conread position: 122-347
Cow position: chr21:46612540-46612759 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 33

Conread position: 122-348
Cow position: chr21:40134410-40134190 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 122-348
Cow position: chr21:41610443-41610199 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 122-348
Cow position: chr21:46848869-46849092 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 171, 0

Conread position: 123-311
Cow position: chr21:45446801-45446605 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 165

Conread position: 123-335
Cow position: chr21:36695827-36696044 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 29

Conread position: 124-290
Cow position: chr21:2785239-2785402 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 125-258
Cow position: chr21:48242789-48242933 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 125-335
Cow position: chr21:23587133-23586928 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 126-253
Cow position: chr21:3236763-3236638 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 126-266
Cow position: chr21:32536651-32536511 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 126-267
Cow position: chr21:37110927-37110785 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 126-285
Cow position: chr21:7208514-7208674 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 75

Conread position: 126-294
Cow position: chr21:37495684-37495859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 126-301
Cow position: chr21:22720827-22720654 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 90

Conread position: 126-301
Cow position: chr21:30970195-30970015 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 39

Conread position: 126-305
Cow position: chr21:36121489-36121303 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 36

Conread position: 126-318
Cow position: chr21:42017340-42017541 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 45

Conread position: 126-325
Cow position: chr21:49353884-49353693 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 126-329
Cow position: chr21:46599618-46599413 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 126-331
Cow position: chr21:24598903-24598708 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 174, 26

Conread position: 126-336
Cow position: chr21:6998201-6997985 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 179, 70

Conread position: 126-336
Cow position: chr21:20160938-20160721 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 30

Conread position: 126-336
Cow position: chr21:22209983-22210201 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 126-336
Cow position: chr21:29978505-29978715 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 26

Conread position: 126-339
Cow position: chr21:5465007-5464792 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 89, 185

Conread position: 126-346
Cow position: chr21:1059318-1059115 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 126-346
Cow position: chr21:22121762-22121545 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 84

Conread position: 126-346
Cow position: chr21:30231436-30231659 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 118

Conread position: 126-346
Cow position: chr21:30848688-30848910 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 195, 68

Conread position: 126-346
Cow position: chr21:41974107-41974339 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 179

Conread position: 126-346
Cow position: chr21:47464859-47465083 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 135

Conread position: 126-347
Cow position: chr21:10114072-10114298 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 108

Conread position: 126-347
Cow position: chr21:31159646-31159436 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 126-348
Cow position: chr21:15543979-15544187 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 126-348
Cow position: chr21:34740086-34739877 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 127-260
Cow position: chr21:30368333-30368197 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 127-260
Cow position: chr21:30977009-30977142 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 111

Conread position: 127-260
Cow position: chr21:42341682-42341817 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 127-261
Cow position: chr21:46609744-46609884 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 127-263
Cow position: chr21:12339876-12339741 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 25

Conread position: 127-266
Cow position: chr21:17857024-17856880 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 107

Conread position: 127-285
Cow position: chr21:31462816-31462658 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 127-287
Cow position: chr21:15869945-15869784 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 7

Conread position: 127-294
Cow position: chr21:6292008-6291833 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 127-296
Cow position: chr21:11353323-11353145 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 127-298
Cow position: chr21:12322757-12322580 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 127-298
Cow position: chr21:16797111-16796934 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 25

Conread position: 127-303
Cow position: chr21:58706-58527 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 138

Conread position: 127-307
Cow position: chr21:11006509-11006697 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 104

Conread position: 127-308
Cow position: chr21:33413838-33414015 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 66

Conread position: 127-311
Cow position: chr21:4109036-4108845 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 127-317
Cow position: chr21:27810651-27810454 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 161

Conread position: 127-319
Cow position: chr21:22851174-22850983 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 167, 0

Conread position: 127-319
Cow position: chr21:30658120-30657932 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 127-321
Cow position: chr21:20174571-20174378 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 70

Conread position: 127-322
Cow position: chr21:48482271-48482469 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 60, 169

Conread position: 127-323
Cow position: chr21:42135360-42135558 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 127-324
Cow position: chr21:14126531-14126338 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 154

Conread position: 127-324
Cow position: chr21:24296506-24296711 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 110

Conread position: 127-327
Cow position: chr21:15012690-15012493 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 127-328
Cow position: chr21:25012337-25012135 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 109

Conread position: 127-329
Cow position: chr21:24875611-24875404 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 127-330
Cow position: chr21:742533-742338 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 153

Conread position: 127-330
Cow position: chr21:16570148-16569952 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 25

Conread position: 127-330
Cow position: chr21:25345123-25344912 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 127-330
Cow position: chr21:27711975-27712192 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 127-330
Cow position: chr21:41590307-41590514 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 127-331
Cow position: chr21:82318-82117 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 39

Conread position: 127-332
Cow position: chr21:37299719-37299511 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 33

Conread position: 127-333
Cow position: chr21:18318972-18318760 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 115

Conread position: 127-333
Cow position: chr21:28907290-28907496 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 158

Conread position: 127-333
Cow position: chr21:47719046-47719251 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 12

Conread position: 127-334
Cow position: chr21:802064-802270 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 75

Conread position: 127-334
Cow position: chr21:8426702-8426493 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 67

Conread position: 127-334
Cow position: chr21:23673004-23672796 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 67, 41

Conread position: 127-334
Cow position: chr21:30592055-30592257 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 60

Conread position: 127-334
Cow position: chr21:32339486-32339693 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-334
Cow position: chr21:36682585-36682372 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 127-335
Cow position: chr21:71845-71633 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 117

Conread position: 127-335
Cow position: chr21:44829497-44829713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 127-336
Cow position: chr21:938280-938066 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 171

Conread position: 127-336
Cow position: chr21:20213512-20213732 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 127-336
Cow position: chr21:42209386-42209584 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 127-343
Cow position: chr21:20153216-20152994 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 110

Conread position: 127-344
Cow position: chr21:36910996-36910774 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 127-345
Cow position: chr21:23568484-23568260 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 127-345
Cow position: chr21:48637497-48637720 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 8

Conread position: 127-346
Cow position: chr21:8349581-8349365 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 25

Conread position: 127-346
Cow position: chr21:17890562-17890338 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 217

Conread position: 127-346
Cow position: chr21:20163967-20163743 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 42

Conread position: 127-346
Cow position: chr21:27863260-27863478 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 127-346
Cow position: chr21:37837819-37838031 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 127-347
Cow position: chr21:22718524-22718749 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 48

Conread position: 127-347
Cow position: chr21:28030538-28030324 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 33

Conread position: 127-347
Cow position: chr21:28244726-28244506 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 174

Conread position: 127-347
Cow position: chr21:38121338-38121136 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 57

Conread position: 127-348
Cow position: chr21:10264294-10264066 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 111

Conread position: 127-348
Cow position: chr21:22014450-22014224 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 33, 23

Conread position: 127-348
Cow position: chr21:24797914-24797690 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 157

Conread position: 127-348
Cow position: chr21:27229544-27229757 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 127-348
Cow position: chr21:29014658-29014876 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 67

Conread position: 128-259
Cow position: chr21:42920742-42920883 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 128-266
Cow position: chr21:18495473-18495336 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 128-267
Cow position: chr21:9315059-9314919 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 128-271
Cow position: chr21:5218966-5218819 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 128-294
Cow position: chr21:28882441-28882268 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 128-303
Cow position: chr21:24757195-24757019 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 158

Conread position: 128-328
Cow position: chr21:29069065-29069274 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 128-330
Cow position: chr21:34654328-34654125 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 181

Conread position: 128-334
Cow position: chr21:24858574-24858362 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 128-336
Cow position: chr21:10004625-10004840 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 153

Conread position: 128-336
Cow position: chr21:41621386-41621170 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 128-338
Cow position: chr21:29658532-29658319 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 135

Conread position: 128-339
Cow position: chr21:13225975-13225757 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 46

Conread position: 128-347
Cow position: chr21:16152698-16152474 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 128-347
Cow position: chr21:46809506-46809737 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 51

Conread position: 128-348
Cow position: chr21:1511544-1511326 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 74, 163

Conread position: 129-266
Cow position: chr21:40846767-40846623 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 49

Conread position: 129-304
Cow position: chr21:14516197-14516026 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 129-328
Cow position: chr21:7169944-7169741 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 129-334
Cow position: chr21:12104610-12104412 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 144, 85

Conread position: 129-335
Cow position: chr21:13842750-13842535 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 129-336
Cow position: chr21:18568380-18568594 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 129-336
Cow position: chr21:47713750-47713959 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 102

Conread position: 129-339
Cow position: chr21:38943351-38943576 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 51

Conread position: 129-343
Cow position: chr21:41156128-41155903 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 130-332
Cow position: chr21:11644710-11644917 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 131-330
Cow position: chr21:32559116-32559314 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 72

Conread position: 131-342
Cow position: chr21:9939953-9940149 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 132-285
Cow position: chr21:42315177-42315325 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 132-306
Cow position: chr21:32647932-32648114 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 132-347
Cow position: chr21:7673367-7673157 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 133-264
Cow position: chr21:40916734-40916600 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 92

Conread position: 133-330
Cow position: chr21:700536-700741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 133-347
Cow position: chr21:11739866-11740085 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 129

Conread position: 133-347
Cow position: chr21:17193495-17193719 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 134-289
Cow position: chr21:40930224-40930383 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 134-301
Cow position: chr21:45651209-45651380 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 23

Conread position: 134-336
Cow position: chr21:41580007-41579801 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 45

Conread position: 134-344
Cow position: chr21:15584171-15584382 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 23

Conread position: 134-347
Cow position: chr21:3763499-3763708 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 134-347
Cow position: chr21:22861244-22861036 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 135-265
Cow position: chr21:3634723-3634848 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 56

Conread position: 135-266
Cow position: chr21:31258720-31258581 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 135-285
Cow position: chr21:8351043-8351197 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 135-311
Cow position: chr21:6317434-6317617 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 178

Conread position: 135-330
Cow position: chr21:31691723-31691536 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 26

Conread position: 135-331
Cow position: chr21:41107525-41107719 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 79

Conread position: 135-345
Cow position: chr21:14760808-14760610 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 135-346
Cow position: chr21:41287545-41287758 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 135-347
Cow position: chr21:34151827-34151620 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 25

Conread position: 136-334
Cow position: chr21:7066135-7066334 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 107

Conread position: 137-345
Cow position: chr21:10561336-10561547 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 137-348
Cow position: chr21:3360767-3360978 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 65, 175

Conread position: 137-348
Cow position: chr21:7824941-7825157 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 146

Conread position: 138-335
Cow position: chr21:10410471-10410270 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 40

Conread position: 138-342
Cow position: chr21:28810027-28810223 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 52

Conread position: 139-266
Cow position: chr21:36398321-36398448 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 140-266
Cow position: chr21:7424767-7424899 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 143-330
Cow position: chr21:828967-829157 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 85

Conread position: 148-336
Cow position: chr21:7221110-7221295 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 46

Conread position: 148-348
Cow position: chr21:6624397-6624191 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 197

Conread position: 152-348
Cow position: chr21:7377689-7377893 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 156-316
Cow position: chr21:9346656-9346487 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 157-340
Cow position: chr21:6735964-6736148 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 160-285
Cow position: chr21:34581474-34581595 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 160-322
Cow position: chr21:40059251-40059087 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 0

Conread position: 160-330
Cow position: chr21:30243459-30243630 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 160-336
Cow position: chr21:47763891-47764072 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 89

Conread position: 160-339
Cow position: chr21:44860905-44861071 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 160-346
Cow position: chr21:17642763-17642949 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 106

Conread position: 160-346
Cow position: chr21:19259042-19258857 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 132

Conread position: 160-347
Cow position: chr21:9416476-9416283 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 161-321
Cow position: chr21:13043800-13043961 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 129

Conread position: 170-344
Cow position: chr21:45329738-45329910 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 109

Conread position: 177-346
Cow position: chr21:41047010-41046841 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 15

Conread position: 178-334
Cow position: chr21:21169293-21169445 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 179-342
Cow position: chr21:42007260-42007422 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 182-347
Cow position: chr21:42384708-42384542 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 183-336
Cow position: chr21:6388199-6388044 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 183-347
Cow position: chr21:28924308-28924143 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 183-347
Cow position: chr21:41598009-41597846 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 184-348
Cow position: chr21:396064-395901 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 186-336
Cow position: chr21:471869-471721 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 186-336
Cow position: chr21:22939965-22939812 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 186-347
Cow position: chr21:30157611-30157770 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 189-334
Cow position: chr21:30980384-30980530 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 91

Conread position: 189-336
Cow position: chr21:26245108-26244959 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 190-346
Cow position: chr21:13036717-13036867 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 191-324
Cow position: chr21:265814-265681 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 58

Conread position: 191-345
Cow position: chr21:33563195-33563044 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 78

Conread position: 194-347
Cow position: chr21:10001264-10001109 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 88

Conread position: 195-345
Cow position: chr21:42413912-42414062 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 15

Conread position: 196-324
Cow position: chr21:23321893-23322021 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 196-342
Cow position: chr21:36795790-36795642 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 199-308
Cow position: chr21:5961958-5961850 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 199-336
Cow position: chr21:13365524-13365388 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 199-347
Cow position: chr21:37344919-37345065 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 200-342
Cow position: chr21:17063102-17062963 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 202-347
Cow position: chr21:28989793-28989644 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 203-333
Cow position: chr21:23800949-23801080 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 205-334
Cow position: chr21:5341918-5342047 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 205-336
Cow position: chr21:10538079-10538210 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 205-345
Cow position: chr21:7581729-7581869 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 205-347
Cow position: chr21:30119870-30119728 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 205-348
Cow position: chr21:13164035-13163892 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-331
Cow position: chr21:38267888-38268012 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 207-348
Cow position: chr21:734763-734627 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 209-343
Cow position: chr21:35647656-35647790 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 212-348
Cow position: chr21:8231509-8231644 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 214-347
Cow position: chr21:12207635-12207768 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 216-332
Cow position: chr21:36910096-36909980 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 230-336
Cow position: chr21:1591705-1591599 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.