Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rspc008_f14.5
        

               Conread position:
               65-330
               

               Cow position:
               chr5:21617738-21617471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               66-286
               

               Cow position:
               chr5:57231913-57231693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               73-301
               

               Cow position:
               chr5:53779427-53779197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               82-335
               

               Cow position:
               chr5:59395930-59395664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               85-348
               

               Cow position:
               chr5:23529036-23529283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               89-266
               

               Cow position:
               chr5:25462343-25462165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               92-336
               

               Cow position:
               chr5:61914828-61914570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               94-347
               

               Cow position:
               chr5:51298460-51298716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               95-336
               

               Cow position:
               chr5:3772096-3771857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               96, 198
               

               Conread position:
               96-265
               

               Cow position:
               chr5:6245411-6245585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               98-330
               

               Cow position:
               chr5:29097612-29097381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               98-332
               

               Cow position:
               chr5:44028061-44028292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               98-347
               

               Cow position:
               chr5:26467878-26467622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               99-264
               

               Cow position:
               chr5:26149283-26149113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               101-330
               

               Cow position:
               chr5:22565867-22565632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               102-334
               

               Cow position:
               chr5:2240745-2240980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               102-345
               

               Cow position:
               chr5:15364516-15364267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               104-320
               

               Cow position:
               chr5:37842038-37842256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               104-332
               

               Cow position:
               chr5:64175885-64176115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               92, 178
               

               Conread position:
               104-334
               

               Cow position:
               chr5:5760065-5760304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               105-294
               

               Cow position:
               chr5:15077391-15077585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               109-285
               

               Cow position:
               chr5:24108820-24109004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               109-288
               

               Cow position:
               chr5:34918581-34918401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               109-290
               

               Cow position:
               chr5:52029642-52029460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               109-294
               

               Cow position:
               chr5:17987654-17987845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               109-303
               

               Cow position:
               chr5:20345779-20345578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               109-310
               

               Cow position:
               chr5:22186647-22186450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               109-315
               

               Cow position:
               chr5:34288017-34288222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               109-317
               

               Cow position:
               chr5:16185621-16185404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               109-328
               

               Cow position:
               chr5:7177390-7177166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               109-330
               

               Cow position:
               chr5:58691-58919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               109-346
               

               Cow position:
               chr5:6528905-6528680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               109-347
               

               Cow position:
               chr5:269859-270104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               109-347
               

               Cow position:
               chr5:26132856-26133101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               109-347
               

               Cow position:
               chr5:39695873-39695647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               109-348
               

               Cow position:
               chr5:55965652-55965899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               110-285
               

               Cow position:
               chr5:63763903-63763723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               110-290
               

               Cow position:
               chr5:19052553-19052739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               110-295
               

               Cow position:
               chr5:55162867-55162674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               110-296
               

               Cow position:
               chr5:29979725-29979911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               110-301
               

               Cow position:
               chr5:33513498-33513684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               110-302
               

               Cow position:
               chr5:43839758-43839958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               110-303
               

               Cow position:
               chr5:31234944-31234755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               110-330
               

               Cow position:
               chr5:55942138-55942366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               110-333
               

               Cow position:
               chr5:61809458-61809677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               221, 69
               

               Conread position:
               110-336
               

               Cow position:
               chr5:53055320-53055554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               110-336
               

               Cow position:
               chr5:66972669-66972436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               110-345
               

               Cow position:
               chr5:59626734-59626973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               110-346
               

               Cow position:
               chr5:20128293-20128049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               110-348
               

               Cow position:
               chr5:44847788-44848029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               111-266
               

               Cow position:
               chr5:4824392-4824225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               111-285
               

               Cow position:
               chr5:52211453-52211629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               111-308
               

               Cow position:
               chr5:56434120-56433916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               111-328
               

               Cow position:
               chr5:52001387-52001608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               111-330
               

               Cow position:
               chr5:66257873-66257652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               111-333
               

               Cow position:
               chr5:46512530-46512758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               112-244
               

               Cow position:
               chr5:43434766-43434905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               112-266
               

               Cow position:
               chr5:12566307-12566466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               112-266
               

               Cow position:
               chr5:56643306-56643144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               112-267
               

               Cow position:
               chr5:56624278-56624441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               112-282
               

               Cow position:
               chr5:1678826-1678649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               112-320
               

               Cow position:
               chr5:57526691-57526901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               112-334
               

               Cow position:
               chr5:61049569-61049341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               112-345
               

               Cow position:
               chr5:72006645-72006865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               112-346
               

               Cow position:
               chr5:17999260-17999495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               112-347
               

               Cow position:
               chr5:11427000-11427237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               112-347
               

               Cow position:
               chr5:35246871-35247113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               112-348
               

               Cow position:
               chr5:71015650-71015894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               113-259
               

               Cow position:
               chr5:44868590-44868441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 15
               

               Conread position:
               113-266
               

               Cow position:
               chr5:71387435-71387284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               113-319
               

               Cow position:
               chr5:13270780-13270993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               113-330
               

               Cow position:
               chr5:62172634-62172425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               113-336
               

               Cow position:
               chr5:2827610-2827381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               113-336
               

               Cow position:
               chr5:11667950-11668178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               113-345
               

               Cow position:
               chr5:64140773-64140533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               113-346
               

               Cow position:
               chr5:32394838-32394595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               113-348
               

               Cow position:
               chr5:35208498-35208259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               114-285
               

               Cow position:
               chr5:38079610-38079428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               114-330
               

               Cow position:
               chr5:69099955-69099733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               114-330
               

               Cow position:
               chr5:72895921-72895699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 172
               

               Conread position:
               114-334
               

               Cow position:
               chr5:44196695-44196920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               115-333
               

               Cow position:
               chr5:75227979-75228189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               115-348
               

               Cow position:
               chr5:36855439-36855199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               116-213
               

               Cow position:
               chr5:29860606-29860509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-257
               

               Cow position:
               chr5:14000870-14000731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               118-257
               

               Cow position:
               chr5:75711906-75712052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               118-288
               

               Cow position:
               chr5:29599321-29599491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               155, 163
               

               Conread position:
               118-288
               

               Cow position:
               chr5:60100693-60100525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               118-288
               

               Cow position:
               chr5:60153998-60153830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               118-297
               

               Cow position:
               chr5:30221547-30221732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               118-298
               

               Cow position:
               chr5:5009878-5010056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               118-298
               

               Cow position:
               chr5:51012231-51012044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               89, 113
               

               Conread position:
               118-304
               

               Cow position:
               chr5:21339029-21339230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               118-315
               

               Cow position:
               chr5:6086110-6086315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               118-318
               

               Cow position:
               chr5:21003530-21003339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               118-323
               

               Cow position:
               chr5:36038774-36038981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               118-325
               

               Cow position:
               chr5:50942929-50943139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               118-335
               

               Cow position:
               chr5:15364101-15363890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               118-336
               

               Cow position:
               chr5:30487459-30487249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               118-336
               

               Cow position:
               chr5:33273928-33273702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 165
               

               Conread position:
               118-336
               

               Cow position:
               chr5:44163142-44163362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               118-345
               

               Cow position:
               chr5:55956141-55955906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 180
               

               Conread position:
               118-346
               

               Cow position:
               chr5:35459066-35459297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               118-346
               

               Cow position:
               chr5:42782517-42782727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               118-346
               

               Cow position:
               chr5:58519186-58519419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               118-346
               

               Cow position:
               chr5:60209914-60210146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               118-347
               

               Cow position:
               chr5:18289350-18289128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               118-347
               

               Cow position:
               chr5:46540829-46541059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               76, 176
               

               Conread position:
               118-347
               

               Cow position:
               chr5:57062298-57062533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               118-347
               

               Cow position:
               chr5:67679411-67679175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               78, 10
               

               Conread position:
               118-348
               

               Cow position:
               chr5:49920156-49919918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               118-348
               

               Cow position:
               chr5:50713519-50713769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               119-347
               

               Cow position:
               chr5:7044475-7044709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               119-347
               

               Cow position:
               chr5:29903313-29903527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               120-254
               

               Cow position:
               chr5:70545075-70545205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               120-265
               

               Cow position:
               chr5:69765804-69765956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               120-315
               

               Cow position:
               chr5:12668763-12668957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               190, 71
               

               Conread position:
               120-337
               

               Cow position:
               chr5:36868966-36868743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               74, 134
               

               Conread position:
               120-338
               

               Cow position:
               chr5:40102519-40102721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               120-345
               

               Cow position:
               chr5:6572960-6572744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               120-347
               

               Cow position:
               chr5:56014951-56014727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               120-348
               

               Cow position:
               chr5:56860672-56860441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 102
               

               Conread position:
               121-232
               

               Cow position:
               chr5:21374888-21375003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               121-249
               

               Cow position:
               chr5:63004475-63004349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-257
               

               Cow position:
               chr5:22923632-22923505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               121-260
               

               Cow position:
               chr5:29213374-29213244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               121-263
               

               Cow position:
               chr5:14419789-14419930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               121-263
               

               Cow position:
               chr5:56563976-56563834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-265
               

               Cow position:
               chr5:12504566-12504712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               121-265
               

               Cow position:
               chr5:64061241-64061097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-266
               

               Cow position:
               chr5:5030667-5030518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               121-266
               

               Cow position:
               chr5:9559641-9559498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               121-266
               

               Cow position:
               chr5:34787800-34787651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               121-266
               

               Cow position:
               chr5:55783733-55783886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-271
               

               Cow position:
               chr5:19811748-19811594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-271
               

               Cow position:
               chr5:41530708-41530868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-277
               

               Cow position:
               chr5:43611927-43611764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               121-281
               

               Cow position:
               chr5:8136687-8136533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               121-281
               

               Cow position:
               chr5:12478745-12478896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-282
               

               Cow position:
               chr5:15770224-15770394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 163
               

               Conread position:
               121-284
               

               Cow position:
               chr5:437718-437874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               121-289
               

               Cow position:
               chr5:65140529-65140350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               121-290
               

               Cow position:
               chr5:58401793-58401622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               121-291
               

               Cow position:
               chr5:29895399-29895223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-297
               

               Cow position:
               chr5:54404633-54404808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               121-300
               

               Cow position:
               chr5:51800381-51800568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               121-302
               

               Cow position:
               chr5:35394212-35394392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               121-302
               

               Cow position:
               chr5:45854729-45854532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-306
               

               Cow position:
               chr5:20127135-20126940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               121-308
               

               Cow position:
               chr5:17086790-17086985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               121-311
               

               Cow position:
               chr5:7675930-7676123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               121-312
               

               Cow position:
               chr5:16179295-16179480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-315
               

               Cow position:
               chr5:49821659-49821456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               121-324
               

               Cow position:
               chr5:54312827-54312620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               121-324
               

               Cow position:
               chr5:74039778-74039984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               121-326
               

               Cow position:
               chr5:31648643-31648433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 107
               

               Conread position:
               121-327
               

               Cow position:
               chr5:26167647-26167437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               121-328
               

               Cow position:
               chr5:26147816-26147606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               121-329
               

               Cow position:
               chr5:19335550-19335767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               121-330
               

               Cow position:
               chr5:42050772-42050566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               121-330
               

               Cow position:
               chr5:53835949-53835730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               73, 152
               

               Conread position:
               121-330
               

               Cow position:
               chr5:56524390-56524187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               121-331
               

               Cow position:
               chr5:21530901-21531092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               121-332
               

               Cow position:
               chr5:34533549-34533336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               182, 36
               

               Conread position:
               121-333
               

               Cow position:
               chr5:65941022-65941240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               121-334
               

               Cow position:
               chr5:22795434-22795226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               121-334
               

               Cow position:
               chr5:35969768-35969542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               66, 195
               

               Conread position:
               121-334
               

               Cow position:
               chr5:39036010-39035789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 117
               

               Conread position:
               121-334
               

               Cow position:
               chr5:47602036-47601821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               121-334
               

               Cow position:
               chr5:50824811-50824601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-335
               

               Cow position:
               chr5:5016651-5016437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 172
               

               Conread position:
               121-335
               

               Cow position:
               chr5:27411197-27411393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               121-335
               

               Cow position:
               chr5:36839175-36838968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               121-335
               

               Cow position:
               chr5:47757000-47756785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 184
               

               Conread position:
               121-336
               

               Cow position:
               chr5:4267888-4267677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               121-336
               

               Cow position:
               chr5:5257059-5257281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr5:26262457-26262667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               121-336
               

               Cow position:
               chr5:43858190-43858412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 155
               

               Conread position:
               121-336
               

               Cow position:
               chr5:44796509-44796726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               87, 5
               

               Conread position:
               121-336
               

               Cow position:
               chr5:59627320-59627107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               121-337
               

               Cow position:
               chr5:34914348-34914546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               121-339
               

               Cow position:
               chr5:7057169-7057397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               121-339
               

               Cow position:
               chr5:16025255-16025456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-339
               

               Cow position:
               chr5:53842519-53842285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               121-342
               

               Cow position:
               chr5:52108031-52108267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               121-343
               

               Cow position:
               chr5:18574410-18574175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               72, 167
               

               Conread position:
               121-344
               

               Cow position:
               chr5:43922942-43923153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               121-345
               

               Cow position:
               chr5:2468986-2469209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               121-345
               

               Cow position:
               chr5:6438799-6439023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               121-345
               

               Cow position:
               chr5:6520234-6520009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               155, 107
               

               Conread position:
               121-345
               

               Cow position:
               chr5:9893897-9894125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 45
               

               Conread position:
               121-345
               

               Cow position:
               chr5:34562237-34562014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               121-345
               

               Cow position:
               chr5:41935426-41935653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 127
               

               Conread position:
               121-345
               

               Cow position:
               chr5:48143562-48143784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               121-347
               

               Cow position:
               chr5:4120255-4120020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               121-347
               

               Cow position:
               chr5:4280673-4280441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr5:12673252-12673477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 161
               

               Conread position:
               121-347
               

               Cow position:
               chr5:14550354-14550587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 225
               

               Conread position:
               121-347
               

               Cow position:
               chr5:16937807-16938026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               121-347
               

               Cow position:
               chr5:28224670-28224449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr5:29828276-29828042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               121-347
               

               Cow position:
               chr5:35685161-35684934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               121-347
               

               Cow position:
               chr5:41165310-41165084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr5:49341807-49342053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr5:57489728-57489948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               121-347
               

               Cow position:
               chr5:57934892-57935111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-347
               

               Cow position:
               chr5:61456075-61455845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 166
               

               Conread position:
               121-347
               

               Cow position:
               chr5:65552493-65552712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               121-347
               

               Cow position:
               chr5:69383479-69383251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               121-348
               

               Cow position:
               chr5:12557059-12557293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               83, 228
               

               Conread position:
               121-348
               

               Cow position:
               chr5:17028304-17028090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               121-348
               

               Cow position:
               chr5:19752529-19752302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               66, 163
               

               Conread position:
               121-348
               

               Cow position:
               chr5:20994861-20995097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               121-348
               

               Cow position:
               chr5:28035951-28035739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               121-348
               

               Cow position:
               chr5:33560510-33560739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               121-348
               

               Cow position:
               chr5:51065743-51065526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               121-348
               

               Cow position:
               chr5:52164945-52165182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               67, 132
               

               Conread position:
               121-348
               

               Cow position:
               chr5:55177108-55176890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               121-348
               

               Cow position:
               chr5:70951664-70951884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               121-348
               

               Cow position:
               chr5:73167786-73168016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               122-249
               

               Cow position:
               chr5:38631222-38631103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               122-266
               

               Cow position:
               chr5:9486857-9487008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               122-266
               

               Cow position:
               chr5:25450171-25450031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-266
               

               Cow position:
               chr5:58487600-58487452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               122-285
               

               Cow position:
               chr5:43815589-43815759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 154
               

               Conread position:
               122-288
               

               Cow position:
               chr5:70572585-70572426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               122-297
               

               Cow position:
               chr5:46710810-46710628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               66, 110
               

               Conread position:
               122-297
               

               Cow position:
               chr5:46715710-46715528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               66, 110
               

               Conread position:
               122-297
               

               Cow position:
               chr5:57086835-57087017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-298
               

               Cow position:
               chr5:56327499-56327676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               122-300
               

               Cow position:
               chr5:54340993-54340808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               122-301
               

               Cow position:
               chr5:1766070-1766257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 141
               

               Conread position:
               122-301
               

               Cow position:
               chr5:43846151-43846342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               122-301
               

               Cow position:
               chr5:54127514-54127332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-306
               

               Cow position:
               chr5:19079470-19079289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               122-311
               

               Cow position:
               chr5:12562533-12562728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               122-315
               

               Cow position:
               chr5:47220719-47220516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               122-321
               

               Cow position:
               chr5:12902146-12901939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-321
               

               Cow position:
               chr5:35190333-35190132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               122-321
               

               Cow position:
               chr5:53145540-53145730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               122-324
               

               Cow position:
               chr5:26548916-26549121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               122-330
               

               Cow position:
               chr5:56071084-56070872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               122-334
               

               Cow position:
               chr5:34914827-34915044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               122-335
               

               Cow position:
               chr5:56059837-56060062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr5:1247490-1247273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               122-336
               

               Cow position:
               chr5:11562501-11562716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               122-336
               

               Cow position:
               chr5:52138165-52137942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               122-336
               

               Cow position:
               chr5:56613336-56613557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               122-336
               

               Cow position:
               chr5:57767761-57767976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               122-336
               

               Cow position:
               chr5:63627313-63627519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               122-336
               

               Cow position:
               chr5:70678418-70678636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 169
               

               Conread position:
               122-338
               

               Cow position:
               chr5:60948359-60948138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 163
               

               Conread position:
               122-338
               

               Cow position:
               chr5:64060673-64060451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               122-339
               

               Cow position:
               chr5:7713975-7713775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-343
               

               Cow position:
               chr5:3582782-3582560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               122-345
               

               Cow position:
               chr5:32975331-32975555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               122-345
               

               Cow position:
               chr5:43604366-43604139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               122-345
               

               Cow position:
               chr5:50723275-50723044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-345
               

               Cow position:
               chr5:67634281-67634519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr5:17828250-17828483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr5:30303108-30302892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               222, 72
               

               Conread position:
               122-346
               

               Cow position:
               chr5:34625175-34624957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               162, 72
               

               Conread position:
               122-346
               

               Cow position:
               chr5:50101150-50101380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               122-346
               

               Cow position:
               chr5:50575995-50575782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               122-348
               

               Cow position:
               chr5:5856087-5855853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               122-348
               

               Cow position:
               chr5:31475910-31475677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               122-348
               

               Cow position:
               chr5:51053421-51053657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 219
               

               Conread position:
               122-348
               

               Cow position:
               chr5:60514798-60515033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               123-310
               

               Cow position:
               chr5:36370500-36370312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               123-311
               

               Cow position:
               chr5:71445618-71445422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               123-314
               

               Cow position:
               chr5:22667296-22667100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               123-347
               

               Cow position:
               chr5:69338040-69337816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-348
               

               Cow position:
               chr5:30253966-30253736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               123-348
               

               Cow position:
               chr5:54875467-54875703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 99
               

               Conread position:
               125-285
               

               Cow position:
               chr5:35235463-35235631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               125-330
               

               Cow position:
               chr5:56877694-56877494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 69
               

               Conread position:
               125-330
               

               Cow position:
               chr5:74643460-74643662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               125-336
               

               Cow position:
               chr5:2309334-2309549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               125-336
               

               Cow position:
               chr5:46022834-46023058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               125-336
               

               Cow position:
               chr5:46129443-46129662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               125-336
               

               Cow position:
               chr5:55756189-55756413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               125-336
               

               Cow position:
               chr5:71768284-71768488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 98
               

               Conread position:
               125-346
               

               Cow position:
               chr5:8023991-8024196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               125-347
               

               Cow position:
               chr5:35976718-35976510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               125-347
               

               Cow position:
               chr5:49474330-49474548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               126-260
               

               Cow position:
               chr5:22898096-22898226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               126-264
               

               Cow position:
               chr5:57585099-57584955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               126-266
               

               Cow position:
               chr5:31317224-31317077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               126-298
               

               Cow position:
               chr5:7139618-7139788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               126-301
               

               Cow position:
               chr5:29256485-29256665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               126-309
               

               Cow position:
               chr5:20667557-20667740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               126-314
               

               Cow position:
               chr5:62639108-62638933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               126-320
               

               Cow position:
               chr5:41885137-41884945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 111
               

               Conread position:
               126-324
               

               Cow position:
               chr5:25598053-25597852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               15, 177
               

               Conread position:
               126-332
               

               Cow position:
               chr5:60523950-60523744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               78, 72
               

               Conread position:
               126-334
               

               Cow position:
               chr5:12654686-12654902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               126-336
               

               Cow position:
               chr5:7723867-7723671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               206, 47
               

               Conread position:
               126-338
               

               Cow position:
               chr5:44722290-44722508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 136
               

               Conread position:
               126-347
               

               Cow position:
               chr5:30805372-30805161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               126-348
               

               Cow position:
               chr5:16214904-16214681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               218, 0
               

               Conread position:
               126-348
               

               Cow position:
               chr5:67932243-67932471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 177
               

               Conread position:
               127-261
               

               Cow position:
               chr5:46479025-46479160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               127-263
               

               Cow position:
               chr5:28660453-28660310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-263
               

               Cow position:
               chr5:55943496-55943636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-264
               

               Cow position:
               chr5:4728291-4728153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 59
               

               Conread position:
               127-264
               

               Cow position:
               chr5:29060717-29060856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-266
               

               Cow position:
               chr5:19626798-19626655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-266
               

               Cow position:
               chr5:57447442-57447589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               127-266
               

               Cow position:
               chr5:59958391-59958251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               127-268
               

               Cow position:
               chr5:17537457-17537598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-268
               

               Cow position:
               chr5:18579111-18578968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 138
               

               Conread position:
               127-271
               

               Cow position:
               chr5:22957625-22957482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               127-277
               

               Cow position:
               chr5:55949456-55949613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-287
               

               Cow position:
               chr5:63031471-63031317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-288
               

               Cow position:
               chr5:49207107-49207272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-288
               

               Cow position:
               chr5:60207927-60207763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-294
               

               Cow position:
               chr5:52192216-52192380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               127-298
               

               Cow position:
               chr5:74887677-74887855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-301
               

               Cow position:
               chr5:24915303-24915485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-301
               

               Cow position:
               chr5:40122386-40122568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-303
               

               Cow position:
               chr5:8736055-8736239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 152
               

               Conread position:
               127-310
               

               Cow position:
               chr5:41009788-41009970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               127-311
               

               Cow position:
               chr5:57399029-57399224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-312
               

               Cow position:
               chr5:62996181-62995988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-314
               

               Cow position:
               chr5:1693870-1694059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               127-315
               

               Cow position:
               chr5:56548788-56548600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               87, 158
               

               Conread position:
               127-316
               

               Cow position:
               chr5:61580502-61580309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               127-317
               

               Cow position:
               chr5:36823091-36822913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               127-319
               

               Cow position:
               chr5:24464960-24464768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               127-320
               

               Cow position:
               chr5:51289379-51289568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               127-320
               

               Cow position:
               chr5:57497204-57497404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               127-324
               

               Cow position:
               chr5:11539830-11540031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               127-324
               

               Cow position:
               chr5:45845468-45845672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 105
               

               Conread position:
               127-324
               

               Cow position:
               chr5:57687358-57687567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-324
               

               Cow position:
               chr5:66659736-66659528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               127-327
               

               Cow position:
               chr5:63172826-63173030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               127-330
               

               Cow position:
               chr5:14314738-14314541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-330
               

               Cow position:
               chr5:17105067-17104866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               127-330
               

               Cow position:
               chr5:44446653-44446853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               198, 68
               

               Conread position:
               127-330
               

               Cow position:
               chr5:63192532-63192727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               127-333
               

               Cow position:
               chr5:51246915-51247121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               127-334
               

               Cow position:
               chr5:11229449-11229663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               127-334
               

               Cow position:
               chr5:15721864-15722065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               127-334
               

               Cow position:
               chr5:22242552-22242763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               127-334
               

               Cow position:
               chr5:38833336-38833132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               127-334
               

               Cow position:
               chr5:40109706-40109502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-335
               

               Cow position:
               chr5:19561224-19561442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-335
               

               Cow position:
               chr5:33834262-33834050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 127
               

               Conread position:
               127-335
               

               Cow position:
               chr5:56467892-56467699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               127-336
               

               Cow position:
               chr5:30247303-30247515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               127-336
               

               Cow position:
               chr5:35228922-35229131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               127-336
               

               Cow position:
               chr5:53935332-53935540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               127-336
               

               Cow position:
               chr5:55068922-55068713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               127-337
               

               Cow position:
               chr5:23527427-23527625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               127-343
               

               Cow position:
               chr5:44810015-44810239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               127-343
               

               Cow position:
               chr5:48919020-48918810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-345
               

               Cow position:
               chr5:34347511-34347730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               64, 120
               

               Conread position:
               127-346
               

               Cow position:
               chr5:12760898-12761121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 105
               

               Conread position:
               127-346
               

               Cow position:
               chr5:39447303-39447538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               127-346
               

               Cow position:
               chr5:40241956-40241744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-346
               

               Cow position:
               chr5:47316753-47316977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               127-346
               

               Cow position:
               chr5:63241201-63240974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr5:7012627-7012851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               127-347
               

               Cow position:
               chr5:14920704-14920933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 209
               

               Conread position:
               127-347
               

               Cow position:
               chr5:15471140-15470930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr5:20843176-20843398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               127-347
               

               Cow position:
               chr5:30233132-30232904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 121
               

               Conread position:
               127-347
               

               Cow position:
               chr5:39937338-39937113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               127-347
               

               Cow position:
               chr5:43403131-43402901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr5:45186893-45187120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 123
               

               Conread position:
               127-347
               

               Cow position:
               chr5:47870832-47871043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr5:52853189-52852967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               127-347
               

               Cow position:
               chr5:57074115-57074335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               127-347
               

               Cow position:
               chr5:57755812-57756032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               127-347
               

               Cow position:
               chr5:64026787-64027023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               127-348
               

               Cow position:
               chr5:30276909-30276686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 211
               

               Conread position:
               127-348
               

               Cow position:
               chr5:54060493-54060274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               127-348
               

               Cow position:
               chr5:56028323-56028544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 174
               

               Conread position:
               127-348
               

               Cow position:
               chr5:63832138-63831923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               202, 66
               

               Conread position:
               128-266
               

               Cow position:
               chr5:54712847-54712988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 119
               

               Conread position:
               128-267
               

               Cow position:
               chr5:21520229-21520364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               128-288
               

               Cow position:
               chr5:74065299-74065462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               128-289
               

               Cow position:
               chr5:63939837-63940007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               128-290
               

               Cow position:
               chr5:36143199-36143037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               128-309
               

               Cow position:
               chr5:15991424-15991605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-316
               

               Cow position:
               chr5:44734506-44734698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               128-324
               

               Cow position:
               chr5:24996000-24996203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 146
               

               Conread position:
               128-330
               

               Cow position:
               chr5:12300132-12299924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               128-330
               

               Cow position:
               chr5:52136831-52137041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               128-334
               

               Cow position:
               chr5:20288037-20288254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               128-334
               

               Cow position:
               chr5:25035033-25035245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 160
               

               Conread position:
               128-335
               

               Cow position:
               chr5:12873973-12873759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               128-335
               

               Cow position:
               chr5:56549589-56549372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               128-336
               

               Cow position:
               chr5:57101305-57101515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               80, 98
               

               Conread position:
               128-336
               

               Cow position:
               chr5:72045456-72045667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               128-338
               

               Cow position:
               chr5:56153820-56153622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               128-346
               

               Cow position:
               chr5:16893557-16893772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               128-347
               

               Cow position:
               chr5:12322590-12322808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 142
               

               Conread position:
               129-282
               

               Cow position:
               chr5:59662837-59662997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               129-293
               

               Cow position:
               chr5:37253643-37253479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-295
               

               Cow position:
               chr5:62011902-62011731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               129-304
               

               Cow position:
               chr5:6876745-6876929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               129-309
               

               Cow position:
               chr5:21721255-21721437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               129-310
               

               Cow position:
               chr5:26990607-26990423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               129-334
               

               Cow position:
               chr5:12434755-12434552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               129-336
               

               Cow position:
               chr5:11769492-11769278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 171
               

               Conread position:
               129-336
               

               Cow position:
               chr5:14903846-14904062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               129-336
               

               Cow position:
               chr5:61784505-61784720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               129-338
               

               Cow position:
               chr5:29515304-29515491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               129-346
               

               Cow position:
               chr5:42845377-42845596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               129-347
               

               Cow position:
               chr5:42064427-42064202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 220
               

               Conread position:
               130-330
               

               Cow position:
               chr5:50600265-50600060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               130-336
               

               Cow position:
               chr5:20779180-20779388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               77, 167
               

               Conread position:
               131-266
               

               Cow position:
               chr5:26790113-26790247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               131-328
               

               Cow position:
               chr5:47743839-47743643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               131-334
               

               Cow position:
               chr5:28302538-28302736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               172, 21
               

               Conread position:
               131-336
               

               Cow position:
               chr5:57156082-57156309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               131-347
               

               Cow position:
               chr5:30845324-30845110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               131-347
               

               Cow position:
               chr5:47696242-47696444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               131-348
               

               Cow position:
               chr5:35513439-35513210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               132-285
               

               Cow position:
               chr5:61593481-61593322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               132-295
               

               Cow position:
               chr5:69682130-69682301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               132-330
               

               Cow position:
               chr5:52778347-52778546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 143
               

               Conread position:
               132-345
               

               Cow position:
               chr5:53947116-53946895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               132-347
               

               Cow position:
               chr5:30562145-30561928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               132-347
               

               Cow position:
               chr5:34050325-34050113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               211, 62
               

               Conread position:
               132-347
               

               Cow position:
               chr5:39875322-39875120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               132-347
               

               Cow position:
               chr5:65883407-65883630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               133-322
               

               Cow position:
               chr5:51233808-51233998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               133-346
               

               Cow position:
               chr5:69033007-69033223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               134-281
               

               Cow position:
               chr5:42753111-42752967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               134-310
               

               Cow position:
               chr5:62572746-62572565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 99
               

               Conread position:
               134-315
               

               Cow position:
               chr5:16668908-16668725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               134-338
               

               Cow position:
               chr5:7410161-7409957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 109
               

               Conread position:
               134-345
               

               Cow position:
               chr5:17062864-17063087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 201
               

               Conread position:
               134-346
               

               Cow position:
               chr5:64523649-64523866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               134-347
               

               Cow position:
               chr5:17554820-17555035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 105
               

               Conread position:
               134-348
               

               Cow position:
               chr5:48867255-48867469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               135-295
               

               Cow position:
               chr5:65745554-65745717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 99
               

               Conread position:
               135-296
               

               Cow position:
               chr5:22386853-22387012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               135-312
               

               Cow position:
               chr5:53980538-53980721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 164
               

               Conread position:
               135-315
               

               Cow position:
               chr5:54753035-54753224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               135-330
               

               Cow position:
               chr5:45397779-45397586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               135-336
               

               Cow position:
               chr5:49501604-49501817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               135-348
               

               Cow position:
               chr5:38717509-38717305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               135-348
               

               Cow position:
               chr5:62142888-62142671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               136-310
               

               Cow position:
               chr5:53795234-53795058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               136-331
               

               Cow position:
               chr5:12351599-12351795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               136-333
               

               Cow position:
               chr5:3743539-3743332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               137-298
               

               Cow position:
               chr5:30035281-30035112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               137-310
               

               Cow position:
               chr5:20812761-20812579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               137-322
               

               Cow position:
               chr5:38040356-38040543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               137-336
               

               Cow position:
               chr5:26097502-26097300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 173
               

               Conread position:
               137-346
               

               Cow position:
               chr5:37646287-37646072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               137-346
               

               Cow position:
               chr5:69731698-69731503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               137-347
               

               Cow position:
               chr5:29352920-29353129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               74, 92
               

               Conread position:
               138-330
               

               Cow position:
               chr5:60016375-60016181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               139-298
               

               Cow position:
               chr5:54751018-54750852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               139-298
               

               Cow position:
               chr5:69427251-69427408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               139-316
               

               Cow position:
               chr5:4864745-4864570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               139-330
               

               Cow position:
               chr5:60184008-60183816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               139-339
               

               Cow position:
               chr5:26377470-26377664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               139-343
               

               Cow position:
               chr5:38169102-38168892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               140-346
               

               Cow position:
               chr5:23678497-23678702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               140-347
               

               Cow position:
               chr5:16939383-16939598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               141-330
               

               Cow position:
               chr5:65753068-65752873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 92
               

               Conread position:
               142-345
               

               Cow position:
               chr5:45225613-45225815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               142-347
               

               Cow position:
               chr5:41713495-41713295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               143-306
               

               Cow position:
               chr5:51125812-51125972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               143-330
               

               Cow position:
               chr5:46704094-46704286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               143-346
               

               Cow position:
               chr5:57419590-57419797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               144-338
               

               Cow position:
               chr5:39258704-39258513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               144-347
               

               Cow position:
               chr5:56334314-56334512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               145-347
               

               Cow position:
               chr5:66366713-66366506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 134
               

               Conread position:
               147-347
               

               Cow position:
               chr5:57686539-57686741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               148-341
               

               Cow position:
               chr5:32935946-32935746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 116
               

               Conread position:
               148-348
               

               Cow position:
               chr5:69636410-69636219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               149-347
               

               Cow position:
               chr5:22643044-22643230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               152-301
               

               Cow position:
               chr5:1027277-1027427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               152-334
               

               Cow position:
               chr5:65050022-65050202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               144, 42
               

               Conread position:
               152-346
               

               Cow position:
               chr5:54350174-54350364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               152-347
               

               Cow position:
               chr5:55795773-55795971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               153-329
               

               Cow position:
               chr5:69461531-69461347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               155-347
               

               Cow position:
               chr5:453745-453555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               160-336
               

               Cow position:
               chr5:72564938-72564771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               160-347
               

               Cow position:
               chr5:65679784-65679974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               161-338
               

               Cow position:
               chr5:71495010-71494826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               163-347
               

               Cow position:
               chr5:7193599-7193415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               178-345
               

               Cow position:
               chr5:37646377-37646544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               182-336
               

               Cow position:
               chr5:30949756-30949908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               183-319
               

               Cow position:
               chr5:44752147-44752284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               183-336
               

               Cow position:
               chr5:56287344-56287496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               147, 11
               

               Conread position:
               183-345
               

               Cow position:
               chr5:60747120-60747278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               186-318
               

               Cow position:
               chr5:42623023-42623154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               186-318
               

               Cow position:
               chr5:51490445-51490577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-330
               

               Cow position:
               chr5:35647500-35647356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-336
               

               Cow position:
               chr5:43844506-43844656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-347
               

               Cow position:
               chr5:61875694-61875540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               189-348
               

               Cow position:
               chr5:58446962-58446803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 151
               

               Conread position:
               191-345
               

               Cow position:
               chr5:58856256-58856101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               191-347
               

               Cow position:
               chr5:54311488-54311332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-348
               

               Cow position:
               chr5:58555291-58555132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               192-347
               

               Cow position:
               chr5:37757687-37757838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               195-336
               

               Cow position:
               chr5:54086688-54086548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               195-347
               

               Cow position:
               chr5:35982587-35982742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               195-347
               

               Cow position:
               chr5:63987297-63987449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               195-348
               

               Cow position:
               chr5:52000366-52000218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               195-348
               

               Cow position:
               chr5:54767761-54767912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               196-336
               

               Cow position:
               chr5:4031839-4031982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               196-345
               

               Cow position:
               chr5:43992471-43992322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-346
               

               Cow position:
               chr5:55129490-55129340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-348
               

               Cow position:
               chr5:46509719-46509870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               197-347
               

               Cow position:
               chr5:29771674-29771526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               197-347
               

               Cow position:
               chr5:37808515-37808667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-348
               

               Cow position:
               chr5:64758621-64758772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-330
               

               Cow position:
               chr5:56517249-56517117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               199-336
               

               Cow position:
               chr5:9369127-9369264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-342
               

               Cow position:
               chr5:27306449-27306308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               199-344
               

               Cow position:
               chr5:4710008-4710152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               205-336
               

               Cow position:
               chr5:26723585-26723455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               205-336
               

               Cow position:
               chr5:47323600-47323470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               205-336
               

               Cow position:
               chr5:51490110-51490238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               205-336
               

               Cow position:
               chr5:57230200-57230331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-344
               

               Cow position:
               chr5:56361931-56361794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               133, 73
               

               Conread position:
               205-347
               

               Cow position:
               chr5:45419999-45420141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-347
               

               Cow position:
               chr5:53710551-53710692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               205-347
               

               Cow position:
               chr5:67212498-67212357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               205-348
               

               Cow position:
               chr5:59872942-59873088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               209-347
               

               Cow position:
               chr5:63656610-63656473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               212-345
               

               Cow position:
               chr5:60189124-60188988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               214-336
               

               Cow position:
               chr5:45574236-45574358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               220-346
               

               Cow position:
               chr5:41129865-41129739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-338
               

               Cow position:
               chr5:62415842-62415956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-346
               

               Cow position:
               chr5:65197562-65197684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               225-345
               

               Cow position:
               chr5:52644962-52645082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               227-348
               

               Cow position:
               chr5:55929060-55928939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	65-330
Cow position:	chr5:21617738-21617471 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	185
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	129, 41
Conread position:	66-286
Cow position:	chr5:57231913-57231693 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	159
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	13, 68
Conread position:	73-301
Cow position:	chr5:53779427-53779197 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	166
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	37, 16
Conread position:	82-335
Cow position:	chr5:59395930-59395664 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	181
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	51, 12
Conread position:	85-348
Cow position:	chr5:23529036-23529283 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	193
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	9, 105
Conread position:	89-266
Cow position:	chr5:25462343-25462165 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	131
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	113, 0
Conread position:	92-336
Cow position:	chr5:61914828-61914570 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	179
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	102, 0
Conread position:	94-347
Cow position:	chr5:51298460-51298716 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	179
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	15, 23
Conread position:	95-336
Cow position:	chr5:3772096-3771857 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	171
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	96, 198
Conread position:	96-265
Cow position:	chr5:6245411-6245585 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	127
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	19, 0
Conread position:	98-330
Cow position:	chr5:29097612-29097381 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	152
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	89, 30
Conread position:	98-332
Cow position:	chr5:44028061-44028292 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	161
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	7, 19
Conread position:	98-347
Cow position:	chr5:26467878-26467622 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	175
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	96, 52
Conread position:	99-264
Cow position:	chr5:26149283-26149113 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	129
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	91, 19
Conread position:	101-330
Cow position:	chr5:22565867-22565632 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	159
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	19, 33
Conread position:	102-334
Cow position:	chr5:2240745-2240980 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	170
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	85, 23
Conread position:	102-345
Cow position:	chr5:15364516-15364267 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	173
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	97, 13
Conread position:	104-320
Cow position:	chr5:37842038-37842256 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	165
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	90, 14
Conread position:	104-332
Cow position:	chr5:64175885-64176115 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	172
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	92, 178
Conread position:	104-334
Cow position:	chr5:5760065-5760304 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	172
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	84, 29