Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 56-813
Cow position:
Alignm length: 787
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 69-440
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 17, 28

Conread position: 69-736
Cow position:
Alignm length: 689
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 69-736
Cow position:
Alignm length: 703
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 69-736
Cow position:
Alignm length: 688
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 9

Conread position: 69-736
Cow position:
Alignm length: 687
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 80

Conread position: 73-695
Cow position:
Alignm length: 646
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 74-660
Cow position:
Alignm length: 607
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 77

Conread position: 74-737
Cow position:
Alignm length: 692
Alignm identity: 434
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 133

Conread position: 75-824
Cow position:
Alignm length: 795
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 78-336
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 248

Conread position: 78-578
Cow position:
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 78-582
Cow position:
Alignm length: 531
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 300

Conread position: 78-736
Cow position:
Alignm length: 675
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 78-736
Cow position:
Alignm length: 677
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 72

Conread position: 78-812
Cow position:
Alignm length: 768
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 36

Conread position: 78-813
Cow position:
Alignm length: 775
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 91

Conread position: 78-813
Cow position:
Alignm length: 757
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 99

Conread position: 80-466
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 52

Conread position: 80-736
Cow position:
Alignm length: 671
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 70

Conread position: 84-736
Cow position:
Alignm length: 676
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 66

Conread position: 107-634
Cow position:
Alignm length: 538
Alignm identity: 358
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 195, 24

Conread position: 124-736
Cow position:
Alignm length: 656
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 148-736
Cow position:
Alignm length: 607
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 230

Conread position: 148-736
Cow position:
Alignm length: 606
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 148-740
Cow position:
Alignm length: 616
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 261

Conread position: 150-736
Cow position:
Alignm length: 607
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 6

Conread position: 150-736
Cow position:
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 429

Conread position: 150-736
Cow position:
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 150-736
Cow position:
Alignm length: 621
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 96

Conread position: 151-553
Cow position:
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-690
Cow position:
Alignm length: 558
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 448

Conread position: 151-733
Cow position:
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 83

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 76

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 243

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 429

Conread position: 151-736
Cow position:
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 213

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 243

Conread position: 151-740
Cow position:
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 244

Conread position: 152-736
Cow position:
Alignm length: 602
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 473

Conread position: 154-435
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 154-485
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 154-634
Cow position:
Alignm length: 511
Alignm identity: 330
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 11

Conread position: 154-723
Cow position:
Alignm length: 591
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 265

Conread position: 154-735
Cow position:
Alignm length: 601
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 257

Conread position: 154-740
Cow position:
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 288

Conread position: 156-713
Cow position:
Alignm length: 567
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 28

Conread position: 157-482
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 221

Conread position: 158-813
Cow position:
Alignm length: 677
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 215

Conread position: 158-821
Cow position:
Alignm length: 703
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 115

Conread position: 159-813
Cow position:
Alignm length: 671
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 164-639
Cow position:
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 81

Conread position: 164-736
Cow position:
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 279

Conread position: 164-736
Cow position:
Alignm length: 594
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 367

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 81

Conread position: 164-736
Cow position:
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 79

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 246

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 39

Conread position: 164-736
Cow position:
Alignm length: 591
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 170

Conread position: 164-736
Cow position:
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 464

Conread position: 164-736
Cow position:
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 166-736
Cow position:
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 79

Conread position: 212-732
Cow position:
Alignm length: 534
Alignm identity: 337
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 22

Conread position: 214-462
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 22

Conread position: 250-723
Cow position:
Alignm length: 477
Alignm identity: 293
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 24

Conread position: 250-736
Cow position:
Alignm length: 503
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 207

Conread position: 254-736
Cow position:
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 123

Conread position: 284-732
Cow position:
Alignm length: 463
Alignm identity: 284
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 215, 151

Conread position: 298-740
Cow position:
Alignm length: 451
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 150

Conread position: 299-722
Cow position:
Alignm length: 441
Alignm identity: 283
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 63, 258

Conread position: 300-821
Cow position:
Alignm length: 531
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 88

Conread position: 303-724
Cow position:
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 165

Conread position: 303-736
Cow position:
Alignm length: 438
Alignm identity: 284
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 119

Conread position: 303-782
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 68

Conread position: 304-740
Cow position:
Alignm length: 443
Alignm identity: 275
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 78

Conread position: 304-815
Cow position:
Alignm length: 529
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 84

Conread position: 305-509
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 134, 0

Conread position: 316-736
Cow position:
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 298

Conread position: 317-576
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 134

Conread position: 319-736
Cow position:
Alignm length: 424
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 221

Conread position: 320-479
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 34

Conread position: 328-741
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 405, 11

Conread position: 329-644
Cow position:
Alignm length: 320
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 281, 53

Conread position: 337-736
Cow position:
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 350

Conread position: 361-736
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 399-812
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 30

Conread position: 400-821
Cow position:
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 234

Conread position: 410-635
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 34

Conread position: 415-736
Cow position:
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 160

Conread position: 417-737
Cow position:
Alignm length: 326
Alignm identity: 222
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 83

Conread position: 438-560
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 438-690
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 80

Conread position: 444-634
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 466-723
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 470-736
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 78

Conread position: 470-736
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 139

Conread position: 471-813
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 50

Conread position: 472-729
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 8

Conread position: 480-685
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 190, 0

Conread position: 490-813
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 498-740
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 540-813
Cow position:
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 546-730
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 130

Conread position: 547-736
Cow position:
Alignm length: 192
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 62

Conread position: 556-736
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 53

Conread position: 558-730
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 156, 0

Conread position: 606-736
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 612-736
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 624-813
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 173

Show alignments to all cow chromosomes.