Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 69-736
Cow position:
Alignm length: 687
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 69-736
Cow position:
Alignm length: 688
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 69-736
Cow position:
Alignm length: 688
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 69-736
Cow position:
Alignm length: 688
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 61

Conread position: 69-736
Cow position:
Alignm length: 687
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 463

Conread position: 74-617
Cow position:
Alignm length: 566
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 111

Conread position: 75-736
Cow position:
Alignm length: 680
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 5

Conread position: 75-813
Cow position:
Alignm length: 790
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 78-480
Cow position:
Alignm length: 444
Alignm identity: 309
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 28

Conread position: 78-648
Cow position:
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 72

Conread position: 78-704
Cow position:
Alignm length: 637
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 109

Conread position: 78-710
Cow position:
Alignm length: 657
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 72

Conread position: 78-731
Cow position:
Alignm length: 668
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 72

Conread position: 78-735
Cow position:
Alignm length: 683
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 24

Conread position: 78-736
Cow position:
Alignm length: 681
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 93

Conread position: 78-736
Cow position:
Alignm length: 678
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 78-736
Cow position:
Alignm length: 688
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 78-736
Cow position:
Alignm length: 682
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 80-305
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 34

Conread position: 80-599
Cow position:
Alignm length: 533
Alignm identity: 336
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 36

Conread position: 80-723
Cow position:
Alignm length: 659
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 71

Conread position: 84-346
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 229

Conread position: 84-732
Cow position:
Alignm length: 683
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 384

Conread position: 84-736
Cow position:
Alignm length: 678
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 66

Conread position: 84-736
Cow position:
Alignm length: 668
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 66

Conread position: 85-658
Cow position:
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Conread position: 87-736
Cow position:
Alignm length: 668
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 63

Conread position: 87-736
Cow position:
Alignm length: 671
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 63

Conread position: 88-728
Cow position:
Alignm length: 674
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 37

Conread position: 99-474
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 127, 51

Conread position: 102-440
Cow position:
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 38

Conread position: 104-825
Cow position:
Alignm length: 761
Alignm identity: 472
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 21

Conread position: 107-312
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 34

Conread position: 107-368
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 43

Conread position: 109-813
Cow position:
Alignm length: 726
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 117-736
Cow position:
Alignm length: 639
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 147-680
Cow position:
Alignm length: 552
Alignm identity: 342
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 39

Conread position: 148-736
Cow position:
Alignm length: 609
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 256

Conread position: 150-732
Cow position:
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 483

Conread position: 150-736
Cow position:
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 483

Conread position: 151-481
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 46

Conread position: 151-732
Cow position:
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 410

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 285

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 190

Conread position: 151-736
Cow position:
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 341

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 257

Conread position: 151-736
Cow position:
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 307

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 450

Conread position: 151-736
Cow position:
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 307

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 261

Conread position: 151-737
Cow position:
Alignm length: 601
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 151-740
Cow position:
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 506

Conread position: 152-356
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 154-524
Cow position:
Alignm length: 390
Alignm identity: 266
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 56

Conread position: 154-616
Cow position:
Alignm length: 473
Alignm identity: 305
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 47

Conread position: 154-718
Cow position:
Alignm length: 583
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 309

Conread position: 154-729
Cow position:
Alignm length: 586
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 64

Conread position: 154-732
Cow position:
Alignm length: 594
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 84

Conread position: 154-736
Cow position:
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 154-736
Cow position:
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 154-797
Cow position:
Alignm length: 668
Alignm identity: 419
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 45

Conread position: 154-803
Cow position:
Alignm length: 684
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 84

Conread position: 157-724
Cow position:
Alignm length: 577
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 61

Conread position: 157-811
Cow position:
Alignm length: 677
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 219

Conread position: 158-472
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 46

Conread position: 164-508
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 79

Conread position: 164-713
Cow position:
Alignm length: 572
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 320

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 79

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 357

Conread position: 164-736
Cow position:
Alignm length: 591
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 164-736
Cow position:
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 79

Conread position: 164-736
Cow position:
Alignm length: 591
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 451

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 462

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 244

Conread position: 164-736
Cow position:
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 466

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 166-736
Cow position:
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 247

Conread position: 173-736
Cow position:
Alignm length: 589
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 171

Conread position: 176-813
Cow position:
Alignm length: 670
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 197

Conread position: 192-736
Cow position:
Alignm length: 552
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 219-736
Cow position:
Alignm length: 549
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 391

Conread position: 232-735
Cow position:
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 155

Conread position: 250-740
Cow position:
Alignm length: 499
Alignm identity: 310
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 185

Conread position: 256-736
Cow position:
Alignm length: 497
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 90

Conread position: 259-813
Cow position:
Alignm length: 570
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 46

Conread position: 272-736
Cow position:
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 203

Conread position: 299-736
Cow position:
Alignm length: 451
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 195

Conread position: 299-740
Cow position:
Alignm length: 453
Alignm identity: 284
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 145, 11

Conread position: 301-729
Cow position:
Alignm length: 441
Alignm identity: 276
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 66

Conread position: 301-736
Cow position:
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 176

Conread position: 304-730
Cow position:
Alignm length: 429
Alignm identity: 257
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 195, 212

Conread position: 316-682
Cow position:
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 45

Conread position: 328-645
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 328-645
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 144

Conread position: 334-736
Cow position:
Alignm length: 409
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 62

Conread position: 354-706
Cow position:
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 137

Conread position: 364-524
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 375-736
Cow position:
Alignm length: 372
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 130

Conread position: 376-736
Cow position:
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 238

Conread position: 397-721
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 70

Conread position: 403-736
Cow position:
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 208

Conread position: 404-713
Cow position:
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 63

Conread position: 417-641
Cow position:
Alignm length: 230
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 419-758
Cow position:
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 195

Conread position: 452-736
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 157

Conread position: 458-645
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 466-698
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 467-729
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 213, 25

Conread position: 468-811
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 121

Conread position: 476-740
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 249, 129

Conread position: 498-812
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 117

Conread position: 507-732
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 102

Conread position: 518-736
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 103, 94

Conread position: 537-736
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 537-746
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 75

Conread position: 558-740
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 51

Conread position: 566-736
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 570-736
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 573-768
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 48, 36

Conread position: 575-741
Cow position:
Alignm length: 168
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 92

Conread position: 579-736
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 590-812
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 22

Conread position: 624-732
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.