Cow genome map
| Conread name: | Ss1.1-rspc011_k9.5 |
| Conread position: | 69-736 |
| Cow position: | chr11:12359159-12358484 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 69-736 |
| Cow position: | chr11:29669373-29668690 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 69-736 |
| Cow position: | chr11:37093802-37093121 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 69-736 |
| Cow position: | chr11:43515373-43514689 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 69-736 |
| Cow position: | chr11:44157980-44157312 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 463 |
| Conread position: | 74-617 |
| Cow position: | chr11:44895747-44895196 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 111 |
| Conread position: | 75-736 |
| Cow position: | chr11:54208885-54209553 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 75-813 |
| Cow position: | chr11:87127090-87127869 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 78-480 |
| Cow position: | chr11:7687164-7687602 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 78-648 |
| Cow position: | chr11:15998162-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 78-704 |
| Cow position: | chr11:81853340-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 78-710 |
| Cow position: | chr11:10210688-10210048 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 78-731 |
| Cow position: | chr11:34020179-34020826 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 78-735 |
| Cow position: | chr11:77729251-77728580 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 78-736 |
| Cow position: | chr11:4271587-4270920 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 93 |
| Conread position: | 78-736 |
| Cow position: | chr11:15982895-15983565 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 78-736 |
| Cow position: | chr11:41171438-41170751 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 78-736 |
| Cow position: | chr11:53288192-53287514 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 80-305 |
| Cow position: | chr11:24677328-24677555 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 80-599 |
| Cow position: | chr11:28050509-28049990 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 336 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 80-723 |
| Cow position: | chr11:30125963-30125335 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 84-346 |
| Cow position: | chr11:9220760-9220467 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 229 |
| Conread position: | 84-732 |
| Cow position: | chr11:28062945-28063613 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 384 |
| Conread position: | 84-736 |
| Cow position: | chr11:9660118-9659446 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 66 |
| Conread position: | 84-736 |
| Cow position: | chr11:25526853-25527499 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 66 |
| Conread position: | 85-658 |
| Cow position: | chr11:44496304-44495732 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 87-736 |
| Cow position: | chr11:8887871-8887217 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 63 |
| Conread position: | 87-736 |
| Cow position: | chr11:37492365-37491705 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 88-728 |
| Cow position: | chr11:8262434-8261770 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 99-474 |
| Cow position: | chr11:31414944-31414560 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 127, 51 |
| Conread position: | 102-440 |
| Cow position: | chr11:17280934-17280601 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 38 |
| Conread position: | 104-825 |
| Cow position: | chr11:50029398-50028658 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 472 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 107-312 |
| Cow position: | chr11:52462390-52462601 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 107-368 |
| Cow position: | chr11:12093060-12093324 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 109-813 |
| Cow position: | chr11:29234340-29233638 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 117-736 |
| Cow position: | chr11:1496756-1496133 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 147-680 |
| Cow position: | chr11:13581639-13581101 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 342 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 148-736 |
| Cow position: | chr11:71328978-71329585 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 256 |
| Conread position: | 150-732 |
| Cow position: | chr11:57628712-57628109 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 483 |
| Conread position: | 150-736 |
| Cow position: | chr11:20921411-20920804 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 483 |
| Conread position: | 151-481 |
| Cow position: | chr11:76375129-76374793 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 151-732 |
| Cow position: | chr11:23876643-23877239 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 410 |
| Conread position: | 151-736 |
| Cow position: | chr11:11987458-11988048 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 285 |
| Conread position: | 151-736 |
| Cow position: | chr11:19103147-19102545 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 190 |
| Conread position: | 151-736 |
| Cow position: | chr11:24392665-24393258 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 341 |
| Conread position: | 151-736 |
| Cow position: | chr11:26125589-26124990 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 257 |
| Conread position: | 151-736 |
| Cow position: | chr11:28055255-28054659 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 307 |
| Conread position: | 151-736 |
| Cow position: | chr11:38836078-38835490 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 450 |
| Conread position: | 151-736 |
| Cow position: | chr11:72110620-72110024 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 307 |
| Conread position: | 151-736 |
| Cow position: | chr11:85394470-85393870 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 261 |
| Conread position: | 151-737 |
| Cow position: | chr11:43731765-43732347 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 151-740 |
| Cow position: | chr11:10846784-10847388 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 506 |
| Conread position: | 152-356 |
| Cow position: | chr11:33195275-33195059 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 154-524 |
| Cow position: | chr11:77235122-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 146, 56 |
| Conread position: | 154-616 |
| Cow position: | chr11:10218211-10217748 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 305 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 154-718 |
| Cow position: | chr11:44861185-44860606 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 309 |
| Conread position: | 154-729 |
| Cow position: | chr11:9158072-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 64 |
| Conread position: | 154-732 |
| Cow position: | chr11:21466425-21467014 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 84 |
| Conread position: | 154-736 |
| Cow position: | chr11:4041718-4041135 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 154-736 |
| Cow position: | chr11:52418735-52419329 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 154-797 |
| Cow position: | chr11:36761437-36762089 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 419 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 154-803 |
| Cow position: | chr11:17220863-17220198 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 84 |
| Conread position: | 157-724 |
| Cow position: | chr11:30304612-30305158 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 61 |
| Conread position: | 157-811 |
| Cow position: | chr11:33044771-33044101 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 219 |
| Conread position: | 158-472 |
| Cow position: | chr11:11126271-11126592 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 164-508 |
| Cow position: | chr11:9736593-9736239 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 79 |
| Conread position: | 164-713 |
| Cow position: | chr11:63660232-63659663 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 320 |
| Conread position: | 164-736 |
| Cow position: | chr11:3492371-3492952 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 79 |
| Conread position: | 164-736 |
| Cow position: | chr11:17108334-17107745 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 357 |
| Conread position: | 164-736 |
| Cow position: | chr11:19064898-19064308 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 164-736 |
| Cow position: | chr11:28230390-28229812 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 79 |
| Conread position: | 164-736 |
| Cow position: | chr11:32450219-32450808 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 451 |
| Conread position: | 164-736 |
| Cow position: | chr11:36744825-36744239 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 462 |
| Conread position: | 164-736 |
| Cow position: | chr11:37477765-37477178 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 244 |
| Conread position: | 164-736 |
| Cow position: | chr11:67449847-67450439 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 466 |
| Conread position: | 164-736 |
| Cow position: | chr11:67847215-67846630 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 166-736 |
| Cow position: | chr11:4028196-4027622 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 247 |
| Conread position: | 173-736 |
| Cow position: | chr11:12351702-12351124 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 171 |
| Conread position: | 176-813 |
| Cow position: | chr11:42428700-42429363 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 197 |
| Conread position: | 192-736 |
| Cow position: | chr11:8244102-8244645 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 219-736 |
| Cow position: | chr11:58133781-58134328 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 391 |
| Conread position: | 232-735 |
| Cow position: | chr11:75919845-75920342 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 250-740 |
| Cow position: | chr11:44230574-44231059 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 185 |
| Conread position: | 256-736 |
| Cow position: | chr11:7113049-7113535 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 259-813 |
| Cow position: | chr11:8282546-8283102 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 46 |
| Conread position: | 272-736 |
| Cow position: | chr11:61401573-61401110 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 203 |
| Conread position: | 299-736 |
| Cow position: | chr11:45110863-45111310 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 195 |
| Conread position: | 299-740 |
| Cow position: | chr11:39833257-39833698 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 11 |
| Conread position: | 301-729 |
| Cow position: | chr11:14730017-14729588 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 301-736 |
| Cow position: | chr11:9607070-9606637 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 176 |
| Conread position: | 304-730 |
| Cow position: | chr11:26566208-26565786 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 195, 212 |
| Conread position: | 316-682 |
| Cow position: | chr11:10049644-10050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 328-645 |
| Cow position: | chr11:13067479-13067172 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 328-645 |
| Cow position: | chr11:13162525-13162832 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 144 |
| Conread position: | 334-736 |
| Cow position: | chr11:10089873-10090277 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 354-706 |
| Cow position: | chr11:66726023-66726375 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 137 |
| Conread position: | 364-524 |
| Cow position: | chr11:46962849-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 375-736 |
| Cow position: | chr11:37065545-37065177 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 130 |
| Conread position: | 376-736 |
| Cow position: | chr11:5343638-5343276 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 238 |
| Conread position: | 397-721 |
| Cow position: | chr11:32684889-32685210 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 403-736 |
| Cow position: | chr11:64045604-64045939 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 208 |
| Conread position: | 404-713 |
| Cow position: | chr11:30186907-30187207 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 417-641 |
| Cow position: | chr11:47761310-47761081 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 419-758 |
| Cow position: | chr11:40776920-40776581 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 452-736 |
| Cow position: | chr11:73476965-73477249 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 157 |
| Conread position: | 458-645 |
| Cow position: | chr11:7688276-7688460 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 466-698 |
| Cow position: | chr11:31414251-31414023 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 467-729 |
| Cow position: | chr11:52886819-52886569 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 213, 25 |
| Conread position: | 468-811 |
| Cow position: | chr11:3240321-3240662 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 476-740 |
| Cow position: | chr11:48084794-48085056 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 249, 129 |
| Conread position: | 498-812 |
| Cow position: | chr11:17280594-17280282 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 507-732 |
| Cow position: | chr11:8519705-8519929 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 102 |
| Conread position: | 518-736 |
| Cow position: | chr11:9734924-9734707 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 103, 94 |
| Conread position: | 537-736 |
| Cow position: | chr11:38505862-38505664 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 537-746 |
| Cow position: | chr11:18073679-18073465 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 558-740 |
| Cow position: | chr11:4065471-4065283 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 566-736 |
| Cow position: | chr11:12093328-12093498 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 570-736 |
| Cow position: | chr11:33194778-33194612 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 573-768 |
| Cow position: | chr11:77235493-77235687 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 575-741 |
| Cow position: | chr11:53432286-53432120 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 92 |
| Conread position: | 579-736 |
| Cow position: | chr11:9220336-9220179 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-812 |
| Cow position: | chr11:7316668-7316896 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 624-732 |
| Cow position: | chr11:76374371-76374264 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.