Cow genome map
| Conread name: | Ss1.1-rspc011_k9.5 |
| Conread position: | 67-500 |
| Cow position: | chr15:327606-328056 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 67-732 |
| Cow position: | chr15:35734662-35735337 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 69-460 |
| Cow position: | chr15:35754625-35754218 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 69-724 |
| Cow position: | chr15:3262200-3261543 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 69-736 |
| Cow position: | chr15:32495190-32494502 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 69-737 |
| Cow position: | chr15:4764418-4765091 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 72-736 |
| Cow position: | chr15:42935924-42936598 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 72-824 |
| Cow position: | chr15:32680344-32679591 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 74-628 |
| Cow position: | chr15:49676248-49676793 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 74-813 |
| Cow position: | chr15:36641844-36642582 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 20 |
| Conread position: | 75-735 |
| Cow position: | chr15:2648448-2647772 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 75-739 |
| Cow position: | chr15:32692766-32693426 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 75-740 |
| Cow position: | chr15:1662588-1663259 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 436 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 132, 21 |
| Conread position: | 75-780 |
| Cow position: | chr15:51799960-51800653 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 75-812 |
| Cow position: | chr15:36627414-36626700 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 78 |
| Conread position: | 76-719 |
| Cow position: | chr15:44828005-44828682 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 423 |
| Conread position: | 78-405 |
| Cow position: | chr15:21448270-21448613 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 78-488 |
| Cow position: | chr15:10787876-10787460 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 78-490 |
| Cow position: | chr15:7933173-7933604 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 78-491 |
| Cow position: | chr15:6371625-6371210 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 72 |
| Conread position: | 78-682 |
| Cow position: | chr15:32722978-32722356 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 312 |
| Conread position: | 78-732 |
| Cow position: | chr15:8001034-8000352 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 72 |
| Conread position: | 78-736 |
| Cow position: | chr15:690011-690674 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 78-736 |
| Cow position: | chr15:1781455-1782139 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 78-736 |
| Cow position: | chr15:4681429-4682117 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 78-736 |
| Cow position: | chr15:6077951-6078625 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 78-736 |
| Cow position: | chr15:6554660-6553971 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 298 |
| Conread position: | 78-736 |
| Cow position: | chr15:8098678-8099372 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 435 |
| Conread position: | 78-736 |
| Cow position: | chr15:17272165-17271512 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 72 |
| Conread position: | 78-736 |
| Cow position: | chr15:21960726-21961392 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 78-736 |
| Cow position: | chr15:37391700-37392377 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 280 |
| Conread position: | 79-736 |
| Cow position: | chr15:53338256-53338908 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 80-487 |
| Cow position: | chr15:370461-370016 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 81-736 |
| Cow position: | chr15:35747509-35748178 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 82-740 |
| Cow position: | chr15:4630717-4630030 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 84-344 |
| Cow position: | chr15:6650827-6650567 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 141, 66 |
| Conread position: | 84-735 |
| Cow position: | chr15:36648133-36648791 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 66 |
| Conread position: | 84-736 |
| Cow position: | chr15:4794903-4795561 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 7 |
| Conread position: | 87-634 |
| Cow position: | chr15:21816518-21815962 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 88-502 |
| Cow position: | chr15:490932-490510 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 91-595 |
| Cow position: | chr15:45886017-45886533 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 345 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 335 |
| Conread position: | 94-813 |
| Cow position: | chr15:2006753-2007506 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 483 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 35, 395 |
| Conread position: | 97-736 |
| Cow position: | chr15:6278023-6277375 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 97-811 |
| Cow position: | chr15:35648996-35648272 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 324 |
| Conread position: | 99-736 |
| Cow position: | chr15:41365416-41366059 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 56 |
| Conread position: | 102-723 |
| Cow position: | chr15:7927849-7928486 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 107-695 |
| Cow position: | chr15:7789122-7788527 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 131-733 |
| Cow position: | chr15:8749698-8750307 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 132-740 |
| Cow position: | chr15:6621597-6622226 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 405 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 133-736 |
| Cow position: | chr15:4733128-4733743 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 136 |
| Conread position: | 146-584 |
| Cow position: | chr15:55483-55934 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 148-733 |
| Cow position: | chr15:525576-524968 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 119 |
| Conread position: | 148-736 |
| Cow position: | chr15:2075936-2076532 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 142 |
| Conread position: | 148-740 |
| Cow position: | chr15:18023497-18022886 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 385 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 150-736 |
| Cow position: | chr15:1519867-1519265 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 150-736 |
| Cow position: | chr15:20748691-20749300 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 350 |
| Conread position: | 151-498 |
| Cow position: | chr15:44069075-44069440 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-732 |
| Cow position: | chr15:4670706-4671309 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 151-735 |
| Cow position: | chr15:4384557-4385151 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 330 |
| Conread position: | 151-735 |
| Cow position: | chr15:12421881-12421282 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-736 |
| Cow position: | chr15:1771781-1772383 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 433 |
| Conread position: | 151-736 |
| Cow position: | chr15:4921430-4922035 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 320 |
| Conread position: | 151-736 |
| Cow position: | chr15:6472624-6472032 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 151-736 |
| Cow position: | chr15:7836524-7837128 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 359 |
| Conread position: | 151-736 |
| Cow position: | chr15:15347838-15347235 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-736 |
| Cow position: | chr15:17039969-17039373 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 428 |
| Conread position: | 151-736 |
| Cow position: | chr15:31358186-31358770 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 151-736 |
| Cow position: | chr15:42490488-42491088 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 151-741 |
| Cow position: | chr15:51215876-51216478 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 277 |
| Conread position: | 152-736 |
| Cow position: | chr15:7233602-7234187 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 152-736 |
| Cow position: | chr15:7544160-7544766 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 153-737 |
| Cow position: | chr15:11624206-11624794 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 154-305 |
| Cow position: | chr15:25789905-25789750 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 154-501 |
| Cow position: | chr15:32286564-32286916 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 154-736 |
| Cow position: | chr15:1763375-1763974 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 207 |
| Conread position: | 154-736 |
| Cow position: | chr15:2011376-2011966 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 78 |
| Conread position: | 154-736 |
| Cow position: | chr15:3038240-3037627 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 240 |
| Conread position: | 154-736 |
| Cow position: | chr15:4649127-4649711 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 154-736 |
| Cow position: | chr15:4677791-4678361 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 73 |
| Conread position: | 154-736 |
| Cow position: | chr15:4960948-4961512 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 80 |
| Conread position: | 154-736 |
| Cow position: | chr15:6156675-6156069 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 89 |
| Conread position: | 154-736 |
| Cow position: | chr15:7894914-7894347 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 292 |
| Conread position: | 154-736 |
| Cow position: | chr15:17291742-17292322 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 241 |
| Conread position: | 154-736 |
| Cow position: | chr15:18333542-18332944 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 441 |
| Conread position: | 154-736 |
| Cow position: | chr15:18576006-18576598 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 154-736 |
| Cow position: | chr15:19738766-19738169 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 417 |
| Conread position: | 154-736 |
| Cow position: | chr15:24294376-24294976 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 154-803 |
| Cow position: | chr15:24793341-24794012 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 154-824 |
| Cow position: | chr15:17787859-17787184 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 157-596 |
| Cow position: | chr15:317041-316608 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 179 |
| Conread position: | 157-732 |
| Cow position: | chr15:23157542-23156958 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 233 |
| Conread position: | 158-736 |
| Cow position: | chr15:10887900-10888489 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 159-720 |
| Cow position: | chr15:38979208-38979787 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 469 |
| Conread position: | 162-736 |
| Cow position: | chr15:18268687-18268102 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 81 |
| Conread position: | 164-453 |
| Cow position: | chr15:32709845-32710147 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 164-462 |
| Cow position: | chr15:50144794-50145113 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 189 |
| Conread position: | 164-552 |
| Cow position: | chr15:2593502-2593114 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 136, 62 |
| Conread position: | 164-614 |
| Cow position: | chr15:3843525-3843064 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 164-619 |
| Cow position: | chr15:13428344-13428806 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 164-619 |
| Cow position: | chr15:22204818-22204346 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 463 |
| Conread position: | 164-650 |
| Cow position: | chr15:21878058-21877558 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 459 |
| Conread position: | 164-705 |
| Cow position: | chr15:22920427-22920979 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 164-735 |
| Cow position: | chr15:14583303-14582734 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 164-736 |
| Cow position: | chr15:443910-444493 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 164-736 |
| Cow position: | chr15:28490837-28490256 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 164-736 |
| Cow position: | chr15:42321120-42320536 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 328 |
| Conread position: | 164-736 |
| Cow position: | chr15:50124640-50124057 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 182 |
| Conread position: | 164-741 |
| Cow position: | chr15:17080884-17080312 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 165-736 |
| Cow position: | chr15:36970220-36970809 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 465 |
| Conread position: | 166-736 |
| Cow position: | chr15:4195767-4196348 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 69 |
| Conread position: | 179-632 |
| Cow position: | chr15:1253625-1254077 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 184-736 |
| Cow position: | chr15:7259943-7260510 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 256 |
| Conread position: | 219-459 |
| Cow position: | chr15:5070893-5070651 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 224-815 |
| Cow position: | chr15:324305-324909 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 163 |
| Conread position: | 228-736 |
| Cow position: | chr15:4170328-4169814 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 178 |
| Conread position: | 238-813 |
| Cow position: | chr15:40104844-40105433 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 134 |
| Conread position: | 238-824 |
| Cow position: | chr15:17219493-17218892 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 250-736 |
| Cow position: | chr15:21666361-21665862 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 268 |
| Conread position: | 253-736 |
| Cow position: | chr15:7523116-7522609 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 280 |
| Conread position: | 296-732 |
| Cow position: | chr15:25789523-25789089 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 297-440 |
| Cow position: | chr15:29288041-29287903 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 301-512 |
| Cow position: | chr15:13871213-13871426 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 301-559 |
| Cow position: | chr15:11598666-11598405 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 301-722 |
| Cow position: | chr15:20357814-20357417 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 301-736 |
| Cow position: | chr15:3010403-3009966 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 301-736 |
| Cow position: | chr15:29009291-29009724 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 295 |
| Conread position: | 301-739 |
| Cow position: | chr15:4811772-4812206 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 303-702 |
| Cow position: | chr15:32733336-32732939 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 73, 232 |
| Conread position: | 303-732 |
| Cow position: | chr15:8408011-8408435 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 304-832 |
| Cow position: | chr15:51671807-51672342 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 307-606 |
| Cow position: | chr15:9428418-9428729 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 131, 100 |
| Conread position: | 315-736 |
| Cow position: | chr15:3888334-3888764 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 316-803 |
| Cow position: | chr15:12614530-12615023 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 292 |
| Conread position: | 317-696 |
| Cow position: | chr15:2676824-2676467 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 326-813 |
| Cow position: | chr15:15266171-15265689 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 36 |
| Conread position: | 342-740 |
| Cow position: | chr15:16542161-16542556 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 32 |
| Conread position: | 344-813 |
| Cow position: | chr15:11299298-11298845 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 308, 10 |
| Conread position: | 351-607 |
| Cow position: | chr15:6650323-6650560 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 365-736 |
| Cow position: | chr15:1834948-1834576 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 149 |
| Conread position: | 376-736 |
| Cow position: | chr15:4143300-4142933 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 244 |
| Conread position: | 403-736 |
| Cow position: | chr15:7922091-7921758 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 208 |
| Conread position: | 429-813 |
| Cow position: | chr15:24715806-24716189 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 438-697 |
| Cow position: | chr15:25186356-25186103 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 445-736 |
| Cow position: | chr15:35754004-35753714 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 447-736 |
| Cow position: | chr15:6370179-6369895 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 449-813 |
| Cow position: | chr15:21448899-21449280 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 130, 113 |
| Conread position: | 469-824 |
| Cow position: | chr15:1236938-1237301 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 470-736 |
| Cow position: | chr15:50146697-50146963 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 476-736 |
| Cow position: | chr15:44069547-44069807 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 484-736 |
| Cow position: | chr15:6593310-6593060 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 92 |
| Conread position: | 495-736 |
| Cow position: | chr15:2924534-2924770 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 504-736 |
| Cow position: | chr15:10787475-10787244 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 505-736 |
| Cow position: | chr15:328091-328311 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 507-728 |
| Cow position: | chr15:7934006-7934207 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 519-813 |
| Cow position: | chr15:686194-686491 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 545-736 |
| Cow position: | chr15:2589772-2589586 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 545-736 |
| Cow position: | chr15:2592133-2591947 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 570-736 |
| Cow position: | chr15:56206-56372 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 597-815 |
| Cow position: | chr15:9429274-9429513 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 611-736 |
| Cow position: | chr15:21623457-21623580 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 611-736 |
| Cow position: | chr15:32710452-32710578 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 612-813 |
| Cow position: | chr15:3843041-3842849 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 624-736 |
| Cow position: | chr15:5068623-5068735 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.